prot_H-paniculata_contig3218.8661.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3218.8661.1
Unique Nameprot_H-paniculata_contig3218.8661.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1489
Homology
BLAST of mRNA_H-paniculata_contig3218.8661.1 vs. uniprot
Match: A0A6H5LNC5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNC5_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.690e-43
Identity = 310/1118 (27.73%), Postives = 404/1118 (36.14%), Query Frame = 0
Query:   49 AAIPVLYRRARVGPRLLGKEVLVSDGVAAVLTGVVTSIESGQARIHYKGGRKAKLDEWIDVRSERFLSAAEAKKQIKLASLAMNPTPPDADNNKPGKKGRKRKVADGKAVEAKANAT-------KGGAGNARKKVKGPTDGGSGASTGTTGSGADDGKTTTKGSKSKGTEKEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKAKVRSPKASKVLMKEKKGVPKGXXXXXXXXXXXXXXXXAGETMGKTKDQADAGATSDISIGSAKISKTAVARKAAKATGDGNDGTSSG-GIEIDGKPSVKSSKKAGVGAAKAPACKTAKNSATAEGAKGKVQAKAVKKKATGXXXXXXXGIATRTTAPTKKNTESSPPPLSPQQPIASAAVLSQSSFSPXXXXXXXXXXXXXXXXXXXXXXXXXXXAIAKPIVAPKKPSVG-SKKSTVVRGGKTARSKTGDLSIVACPYTGGSTGXXXSGRGRVKPKGRPLGAKNNKKDRSDVGDLLSCPEVEVAGGGARERPLVGSSSXXXXXXXXXXXXXXXXXXXXXXXXSQHA----------PKGSSNRRDWRPVELGFGGAMWGLGQFFR-----GARPRVAVSTTLAEEAPPPPARTRDLRSGSLRNLGWGTMDKGWEKEEEKE---AELMHEYPDLGWRSR----------------------VRRANVHANEAVDLGEDAHFREWLLRLRRVQDIPIGHVEKCTHELAVLLGGAPADASLRASLRALLIAETLRGGASSEVASYVRRLASLIANAASRARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAVARGLVEYNDATSLRSPPVITLIQDPEGAAAYAHALVHVARSKKRQREAAARVAAGEVRGATRIEALWKGEEDAPAAPTDLVPQTAGASAVDPTITKTINVNVPTGTMKHATGSRLMARTEVRCSATPLQDWGQSEPLPSVVPSPAAPNVENTGTPSPPPLAPPKVVGSIPGVLPFSSSGEALLLHAKAMVGLKRTQRWAQAWLALPEGSSAVG 1117
            +A+P   +RAR+GPRL+GKEVLVSDGVA VLTGVVT+IE+GQAR+HYKG RKAKLDEWIDVRSERFLSA EAKKQI+L  LAMNP+         G  G+KRK   G +               KGG G+  +K +   D               DGK  T G ++K    +                                                   XXXXXXXXXXXXXXX   K      + +  K ++G                    A E  GK+   +             + SKT   +   +A G    G+ S  G +  G+P ++S+   G+   K+   K+              QA+A+     G       G  T T+  TK +++                                                          V  KKP +G S K T++        +  +  +++                R     R   AK  ++ R D  + ++  E       ARE+ L  SS                            A            G   R  W   +LGFGG  WGLG F+R     G     ++  T+  E  P P+     + GS  +   G   K    +       AEL   +   G  +R                      VRRA V+A EAVDLGEDA FR+WL RLR +QDIP+GHVEKC+  LAVLLG +P D S+RAS+RALL+AETLRGGAS EVA++VR LA L+A+AAS+A P                                                                                  CAV        D T     P    I+D EGAAAYAHAL ++ARSK+                                                                           +  +   T    W     L +V     A  V    +  PPP     VVG++ G  PFS SG++LL+HAK MVGLKR  RW  AWL  P      G
Sbjct:  640 SAVPGALKRARIGPRLIGKEVLVSDGVAVVLTGVVTAIEAGQARLHYKG-RKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGRVTGPSGGPAGKKRKAVPGGSXXXXXXXXXXXXXXKKGGDGDGVEKARYKKD---------RDKKLGDGKAGTAGGENKAGPMK---------------------------------------------------XXXXXXXXXXXXXXXXNRKKDGKTVAAISNKHRRG--------------EKIASGAKEAAGKSSSPS-------------RKSKTKTGKM--RAVGGCETGSKSNPGRKKAGEPDIRSN---GLSKLKSAGGKSG-------------QARAL---GNGCSTGRSSGXXT-TSRKTKHHSDKK--------------------------------------------------------VTKKKPRMGLSIKPTIIPXXXXXXREVPEHHVIS--------------NRRAAVLARTF-AKETEEARKDFEEAVAAAERSRV---AREQRLKTSSPRVLPRPPASQGAPSSYSAKSVGGGDGSANDPTAAATAVSSGPGRRYVW--PDLGFGGQPWGLGPFYREEEADGGDSSASLDPTMDREPSPSPSCAAFAQGGSSHSRKPGEQGKLEHIDAHAHGCVAELGETWQGDGSAARSPVGAASASAAIPTKPPRAPKEVRRARVYAGEAVDLGEDAAFRKWLGRLRVIQDIPVGHVEKCSRSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASPPKSAASTPTVGNPVIPSGGDSHDNARFSPGKDQVCVDTLDLDAKKRH-----------------------------------CAVG-------DNTD----PAAVSIRDKEGAAAYAHALTYLARSKR--------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKKGKKTKKAAWAMRRHLEAVE---TAQVVVLPSSQEPPPA----VVGNLLGGYPFSRSGDSLLMHAKTMVGLKRAHRWVTAWLNAPSNPPTGG 1474          
BLAST of mRNA_H-paniculata_contig3218.8661.1 vs. uniprot
Match: D7G7M9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M9_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 1.500e-38
Identity = 267/807 (33.09%), Postives = 322/807 (39.90%), Query Frame = 0
Query:   45 SLAAAAIPVLYRRARVGPRLLGKEVLVSDGVAAVLTGVVTSIESGQARIHYKGGRKAKLDEWIDVRSERFLSAAEAKKQIKLASLAMNPTPPDADNNKPGKKGRKRKVADGKAVEAKANATKGGAGNARKKVKGPTDGGSGASTGTTGSGADDGKTTTKGSKSKGTEKEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKAKVRSPKAS-KVLMKEKKGVPKGXXXXXXXXXXXXXXXXAGETMGKTKDQADAGATSDISIGSAKISKTAVARKAAKATGDGNDGTSSGGIEIDGKPSVKSSKKAGVGAAKAPACKTAKNSATAEGAKGKVQAKAVKKKATGXXXXXXXGIATRTTAPTKKNTESSPPPLSPQQPIASAAVLSQSSFSPXXXXXXXXXXXXXXXXXXXXXXXXXXXAIAKPIVAPKKPSVG-SKKSTVVRGGKTARSKTGDLSIVACPYTGGSTGXXXSGRGRVKPKGRPLGAKNNKKDRSDVGDLLSCPEVEVAGGGARERPLVGSSSXXXXXXXXXXXXXXXXXXXXXXXXSQHAPKGSSNRRDWRPVELGFGGAMWGLGQFFR-----GARPRVAVSTTLAEEAPPPPARTRDLRSGSLRNLGWGTMDK---------------GWEKEEEKEA--------ELMHEYPDLGWRS--RVRRANVHANEAVDLGEDAHFREWLLRLRRVQDIPIGHVEKCTHELAVLLGGAPADASLRASLRALLIAETLRGGASSEVASYVRRLASLIANAASRARP 819
            S   +A+P   +RAR+GPRL+GKEVLVSDGVA VLTGVVT+IE+GQAR+HYKG RKAKLDEWIDVRSERFLSA EAKKQI+L  LAMNP+         G  G+KRK   G                          GG    TG    G   GK   KG    G EK                                                                        RS K S K L   K G   G  XXXXXXXXXXXXXX          + D    + IS       K A             +G     ++I   PS KS  K G   A    C+T   S            KA  KKA G       G +   +A  K                        SS +    XXXX    XXX              + K     KKP +G S K TV+                                 R   K      KN ++  +         E  +    +R  P   +S         XXXXXXXX        +     G   R  W   +LGFGG  WGLG F+R     G     ++  T+  +    P+       GS  +   G   K               G  ++ +  A            E P    R+   VRRA V A EAVDLGEDA FR+WL RLR +QDIP+GHVEKC+  LAVLLG +P D S+RAS+RALL+AETLRGGAS EVA++VR LA L+A+AAS+A P
Sbjct:  135 SAVESAVPGALKRARIGPRLIGKEVLVSDGVAVVLTGVVTAIEAGQARLHYKG-RKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGHVTGPSGGPAGKKRKAVPG--------------------------GGGSEKTG----GRSSGKRAKKGGDGDGIEK-----------------------------------------------------------------------ARSKKDSDKKLGDGKTGTAGGENXXXXXXXXXXXXXXXXXXXXXXNRKKDGKTVAFISKKHRSGEKIA-------------NGAKEAAVKIS-SPSRKSKTKTGKMRA-VGGCETGSKS------------KAGGKKA-GEPDIRSNGSSQLKSAGGK------------------------SSKAEALGXXXXTGRSXXXGTTSSKTKHHSDKKVTK-----KKPRMGLSIKPTVIPXXXXXXXXXXXXXXXXXXXA--------VVLARTFAKETEEAQKNFEEAVAAAERSRVAREQRLKTSSSRVLPRPPASQGAASSYAAXXXXXXXXSANDPTATATAVSSGPGRRCVW--PDLGFGGQPWGLGPFYREAEAEGGGSSASLDPTIDRKPSLSPSCASFAEGGSSHSRKPGKQGKLEHIDGHAQGCVAELGETRQGDGSAARSPVGAASASAEIPTKPPRALREVRRARVDAGEAVDLGEDAAFRKWLGRLRAIQDIPVGHVEKCSGSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASP 772          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3218.8661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LNC5_9PHAE1.690e-4327.73JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G7M9_ECTSI1.500e-3833.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3218contigH-paniculata_contig3218:2531..14636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3218.8661.1mRNA_H-paniculata_contig3218.8661.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3218 2007..15408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3218.8661.1 ID=prot_H-paniculata_contig3218.8661.1|Name=mRNA_H-paniculata_contig3218.8661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1489bp
MEPNGTKHTGGGDGTENEGAVGDSSEASVNGGGSGGMDVVGMVPSLAAAA
IPVLYRRARVGPRLLGKEVLVSDGVAAVLTGVVTSIESGQARIHYKGGRK
AKLDEWIDVRSERFLSAAEAKKQIKLASLAMNPTPPDADNNKPGKKGRKR
KVADGKAVEAKANATKGGAGNARKKVKGPTDGGSGASTGTTGSGADDGKT
TTKGSKSKGTEKEGGSGSGGDGARKGGEQGKSGKGKTKGSAAAGSSSSSS
AGSRKSASSSSSSSPAASKAKGSPKKGKEMKAKVRSPKASKVLMKEKKGV
PKGKGKAKGKEKETSKSTKAGETMGKTKDQADAGATSDISIGSAKISKTA
VARKAAKATGDGNDGTSSGGIEIDGKPSVKSSKKAGVGAAKAPACKTAKN
SATAEGAKGKVQAKAVKKKATGAAAAGAAGIATRTTAPTKKNTESSPPPL
SPQQPIASAAVLSQSSFSPSSSSASASASALPSNSPSTTTSSSSSSAIAK
PIVAPKKPSVGSKKSTVVRGGKTARSKTGDLSIVACPYTGGSTGGSSSGR
GRVKPKGRPLGAKNNKKDRSDVGDLLSCPEVEVAGGGARERPLVGSSSSS
SSSSSSSLSSSSLSLSSSLSSSSQHAPKGSSNRRDWRPVELGFGGAMWGL
GQFFRGARPRVAVSTTLAEEAPPPPARTRDLRSGSLRNLGWGTMDKGWEK
EEEKEAELMHEYPDLGWRSRVRRANVHANEAVDLGEDAHFREWLLRLRRV
QDIPIGHVEKCTHELAVLLGGAPADASLRASLRALLIAETLRGGASSEVA
SYVRRLASLIANAASRARPLPAPVTPSPRQQSSSTTTATAFGAAPAAATG
QGQGEFLSISCTDDVDDVESSANADGEEVQAHAEGAKAGGAAGEGGAGAN
ACAVARGLVEYNDATSLRSPPVITLIQDPEGAAAYAHALVHVARSKKRQR
EAAARVAAGEVRGATRIEALWKGEEDAPAAPTDLVPQTAGASAVDPTITK
TINVNVPTGTMKHATGSRLMARTEVRCSATPLQDWGQSEPLPSVVPSPAA
PNVENTGTPSPPPLAPPKVVGSIPGVLPFSSSGEALLLHAKAMVGLKRTQ
RWAQAWLALPEGSSAVGWSFSPPLAAAVIEIMGENKKITATAAAPGSPHL
LDLVCTSGQPKAVEETEMEEGQEEHQLAQGGASASGATDSSSRGTGNGTT
SSTPSQGEVDKTSEEYLAGFAAAIAEPKERPFEGRFAWGIHAAGECTPPL
WAPNASTLAALGLKVPRNLALHPPQPSLALAPPAGVQHAPAGEETTRHAA
AATAEAAAHHAAAHHAAHHAAAHHAAAVAAAAAASGSVPFGMMNPFWAQA
SAAAAAAAAATVNAQLQQRSYRSTPILTYGAGAGGSSRVVAAPLAAGAPR
SVTTLANPVVPMANAPVALAVSATPVAVAVAAGSTPILTAPLPAPITVSV
GSTINPTPAVAAAPAGVGMDMPADNSSPTAAVASPLPL*
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