prot_H-paniculata_contig3205.8627.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3205.8627.1
Unique Nameprot_H-paniculata_contig3205.8627.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length600
Homology
BLAST of mRNA_H-paniculata_contig3205.8627.1 vs. uniprot
Match: D8LJF0_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF0_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 3.950e-147
Identity = 297/515 (57.67%), Postives = 335/515 (65.05%), Query Frame = 0
Query:    1 MVLASVAALQGQGVSEKAVDTLGMGVKEAIETLVRYQHLHRAITFVDPQPGASADKGV-VGGTAGSAGVTCPFSVSVTVSEAKGLKRSDLFTADPFAWVRLGGSSHKTAVCRSTRQDRPQWGETFKFMVLSLERSLMVQIWDADELGADVQLGETAVDLSGLPVNNPFQ-PDSS---VVDEWHSLQV--GGSYCQILFPSGAVRLKIRIDQQLYVSVHKKKVDSAARLLQSAMRSFVLRRQKLS--EGPPRSTSGGNPANNKNSNSSRPSSGSDRAQAVFAAVD------AXXXXXXXXXXXXXXXXXXXLGWASSSRKSVAGAVGGGWEASGAHAASTLVDVFPAE-DDDERGVVARSGSQERSGGFGVGSKGVSILVMKFLEGPALERFGGGSRGNTSFRP-------------KSSVGTFVGSRSTGSFAATNSTERKSSGATSVRFVDGGRRSTVGGWGENDEAARPGTSVCKDCLSDVASLLAVAMAPARATVTVMEDA-----THLRYP 481
            MVLA+VAA  GQGVSE+AVDTLGMGVKEAIETLVRYQHLHRAITF+DP  G S++K + + G A  AGVTCP+SV VTV EA+GLKRSD+FTADPFAW+RLGGSSHKT+VCRST   RP WGETFKF +LSLERSL+VQ+WDADELGADV LGET+V+LS LPVNNPFQ PD++   V D W++LQV  GG+       S  VRLKI IDQQL+V++HKKKVDSAARLLQ AMRSFV RRQ L+  +   R  +GG P                                A                    G   SSRKSVAGAVGGGWEASGAHAASTL DVFP E +D                     ++GVS +V KFLEGPALERF  G  G                   KSSVGT  G RST       ++ R+SS A SVRFVDGGRRSTVGGWGE DEAARPG SVCKDCLSDV SLLAVAMAPA A  T ME A      ++R+P
Sbjct:  448 MVLAAVAARGGQGVSEEAVDTLGMGVKEAIETLVRYQHLHRAITFIDPPSGWSSEKDLDMAGGAVGAGVTCPYSVGVTVVEARGLKRSDIFTADPFAWLRLGGSSHKTSVCRST--SRPHWGETFKFALLSLERSLVVQVWDADELGADVLLGETSVNLSKLPVNNPFQLPDAAGGAVADVWYNLQVEGGGNEAGSSVGSRGVRLKISIDQQLHVAIHKKKVDSAARLLQGAMRSFVFRRQTLTNRQKQGRDGTGGAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADSEDAAGRGVRGGGGMGYGGGRQQSSRKSVAGAVGGGWEASGAHAASTLADVFPDEVEDTGXXXXXXXXXXXXXXXXDPATRGVSAIVTKFLEGPALERFASGGVGXXXXXXXXXXXXXXXXILRKSSVGTLGGRRST------LASGRRSSAA-SVRFVDGGRRSTVGGWGEGDEAARPGASVCKDCLSDVGSLLAVAMAPAEAARTTMEFARLGIAAYIRHP 953          
BLAST of mRNA_H-paniculata_contig3205.8627.1 vs. uniprot
Match: A0A6H5KM70_9PHAE (C2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM70_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 1.880e-126
Identity = 271/492 (55.08%), Postives = 304/492 (61.79%), Query Frame = 0
Query:    1 MVLASVAALQGQGVSEKAVDTLGMGVKEAIETLVRYQHLHRAITFVDPQPGASADKGV-VGGTAGSAGVTCPFSVSVTVSEAKGLKRSDLFTADPFAWVRLGGSSHKTAVCRSTRQDRPQWGETFKFMVLSLERSLMVQIWDADELGADVQLGETAVDLSGLPVNNPFQ-PDSS---VVDEWHSLQV--GGSYCQILFPSGAVRLKIRIDQQLYVSVHKKKVDSAARLLQSAMRSFVLRRQKLSEGPPRSTSGGN-PANNKNSNSSRPSSGSDRAQAVFAAVDAXXXXXXXXXXXXXXXXXXXLGWA------SSSRKSVAGAVGGGWEASGAHAASTLVDVFPAEDDDERGVVARSGSQERSGGFG-VGSKGVSILVMKFLEGPALERFGGGSRGNTSFRPKSSVGTFVGSRSTGSFAATNSTERKSSGATS----VRFVDGGRRSTVGGWGENDEAARPGTSVCKDCLSDVASLLAVAMAPARATVTVME 473
            MVLA+VAA  GQGVSE+AVDTLGMGVKEAIETLVRYQHLHRAITF+DP  G S++K + + G A  AGVTCP+SV VTV EA+GLKRSD+FTADPFAW+RLGGSSHKT+VCRST   RP+WGETFKF +LSLERSL+VQ+WDADELGADV LGET+VDL+ LPVNNPFQ PD +   V D W++LQV  GGS       S  +RLKI IDQQL+V++HKKKVDSAARLLQ AMRSFV RRQ L+    +   GG  P     S ++                  XXXXX               G         SSRKSVAGAVGGGWEASGAHAASTL DVFP E +D                 G   ++GVS +V KFLEGPALERF  G  G                                         VRF             E DEAARPG SVCKDCLSDV SLLAVAMAPA A  T ME
Sbjct:  327 MVLAAVAARGGQGVSEEAVDTLGMGVKEAIETLVRYQHLHRAITFIDPPSGWSSEKDLDMAGGAVGAGVTCPYSVGVTVVEARGLKRSDIFTADPFAWLRLGGSSHKTSVCRST--SRPRWGETFKFALLSLERSLVVQVWDADELGADVLLGETSVDLNKLPVNNPFQSPDGAGGAVADVWYNLQVERGGSEGGSSVGSRGIRLKISIDQQLHVAIHKKKVDSAARLLQGAMRSFVFRRQTLTNRQKQGREGGGAPPLPPRSQTATDXXXXXXXXXXXXXXXXXXXXXADSEDAAGRGVRGGGGMGCGGLRQQSSRKSVAGAVGGGWEASGAHAASTLADVFPDEVEDAGXXXXXXXXXXXXXXXGDPATRGVSAIVTKFLEGPALERFASGGMGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRFXXXXXXXXXXXXXEGDEAARPGASVCKDCLSDVGSLLAVAMAPAEAARTTME 816          
BLAST of mRNA_H-paniculata_contig3205.8627.1 vs. uniprot
Match: A0A8J6C8Z8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8Z8_DIALT)

HSP 1 Score: 57.8 bits (138), Expect = 2.750e-5
Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 0
Query:   76 VTVSEAKGLKRSDLFT-ADPFAWVRLGGSSHKTAVCRSTRQDR-PQWGETFKFMVLSLERSLMVQIWDADELGADVQLGETAVDLSGLPVNNPFQPDSSVVD 175
            V V  A  L   DL + +DP+  ++L   S +T   R+ R D  P WGET    V+  ++ L+V++WDADELG+D  +G   V ++      P QP    V+
Sbjct:  192 VRVVCASNLVSMDLLSPSDPYCVLKLAQQSMRT---RTVRDDNAPSWGETLSLNVIEPQQVLLVEVWDADELGSDQLIGTAHVPIAAA-CTQPSQPTPITVE 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3205.8627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJF0_ECTSI3.950e-14757.67C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KM70_9PHAE1.880e-12655.08C2 domain-containing protein (Fragment) n=1 Tax=Ec... [more]
A0A8J6C8Z8_DIALT2.750e-535.29Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 73..170
e-value: 1.2E-11
score: 54.6
IPR000008C2 domainPFAMPF00168C2coord: 74..171
e-value: 4.5E-13
score: 49.4
IPR000008C2 domainPROSITEPS50004C2coord: 73..155
score: 12.958
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 73..219
e-value: 9.2E-20
score: 73.2
NoneNo IPR availablePANTHERPTHR46502:SF2coord: 74..203
NoneNo IPR availablePANTHERPTHR46502FAMILY NOT NAMEDcoord: 74..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..600
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 74..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3205contigH-paniculata_contig3205:2428..14982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3205.8627.1mRNA_H-paniculata_contig3205.8627.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3205 2428..18363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3205.8627.1 ID=prot_H-paniculata_contig3205.8627.1|Name=mRNA_H-paniculata_contig3205.8627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=600bp
MVLASVAALQGQGVSEKAVDTLGMGVKEAIETLVRYQHLHRAITFVDPQP
GASADKGVVGGTAGSAGVTCPFSVSVTVSEAKGLKRSDLFTADPFAWVRL
GGSSHKTAVCRSTRQDRPQWGETFKFMVLSLERSLMVQIWDADELGADVQ
LGETAVDLSGLPVNNPFQPDSSVVDEWHSLQVGGSYCQILFPSGAVRLKI
RIDQQLYVSVHKKKVDSAARLLQSAMRSFVLRRQKLSEGPPRSTSGGNPA
NNKNSNSSRPSSGSDRAQAVFAAVDAADGPGRGSGSRTGSRGGSRLGWAS
SSRKSVAGAVGGGWEASGAHAASTLVDVFPAEDDDERGVVARSGSQERSG
GFGVGSKGVSILVMKFLEGPALERFGGGSRGNTSFRPKSSVGTFVGSRST
GSFAATNSTERKSSGATSVRFVDGGRRSTVGGWGENDEAARPGTSVCKDC
LSDVASLLAVAMAPARATVTVMEDATHLRYPTALADGPPPLAVAAFPPPR
GGFGPLTVTSCAAFAPLRGDNWAERAAPVLVAPSAEAAAAVATAAGQVWD
KAMRAFGAGGDGAGRVLGLVGGGGGTMTGATFGSKASLTVVLKDGGHLRC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf