prot_H-paniculata_contig11334.860.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11334.860.1
Unique Nameprot_H-paniculata_contig11334.860.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
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BLAST of mRNA_H-paniculata_contig11334.860.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 7.890e-21
Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 0 
Query:   21 SLTNMNEMCRKLTAQVDRQRKSGWMPKI-GGGFKPYNHNAPDLSLDLAAVDGSLSERDMAHAGCHCFRGSGTPEYAERVHRFARPAVGLANRSGEVRDIEDLKAFGRDP 128
            S ++M E C+ L ++ DRQRK      + GGG  PY+ +APDL+LDLA ++G L+E++  HA C  +R    P+ A   H FARP VGLA        IEDL+AF  +P
Sbjct:   65 SNSSMREFCQALRSKADRQRKHNKFLNLPGGGRVPYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKVARAAHEFARPRVGLAGGHDGTHAIEDLRAFCGNP 173
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BLAST of mRNA_H-paniculata_contig11334.860.1 vs. uniprot
Match: D8LEJ1_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ1_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.410e-17
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 0 
Query:   23 TNMNEMCRKLTAQVDRQRKSGWMPKI-GGGFKPYNHNAPDLSLDLAAVDGSLSERDMAHAGCHCFRGSGTPEYAERVHRFARPAVGLAN-RSGEVR 116
            ++M E C+ L ++VDRQRK      + GGG  PY+ +APDL+LDLA ++G L+E++  HA C  +R    P+     H FARP VGLA    G VR
Sbjct:  187 SSMQESCQALRSKVDRQRKHNKFLNLPGGGRVPYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKVTRAAHEFARPRVGLAGGHDGVVR 282
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11334.860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZN2_9PHAE7.890e-2144.04Helicase ATP-binding domain-containing protein n=1... [more]
D8LEJ1_ECTSI1.410e-1744.79Helicase ATP-binding domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11334contigH-paniculata_contig11334:147..5349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11334.860.1mRNA_H-paniculata_contig11334.860.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11334 147..5349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11334.860.1 ID=prot_H-paniculata_contig11334.860.1|Name=mRNA_H-paniculata_contig11334.860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
RSRGGASPTRRQQQQRPPARSLTNMNEMCRKLTAQVDRQRKSGWMPKIGG
GFKPYNHNAPDLSLDLAAVDGSLSERDMAHAGCHCFRGSGTPEYAERVHR
FARPAVGLANRSGEVRDIEDLKAFGRDPCGIMENNNNNNDDDDDGSATRT
SAGTAGA
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