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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 3 |
| Model size | 971 |
| Cds size | 522 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3190.8593.1 >prot_H-paniculata_contig3190.8593.1 ID=prot_H-paniculata_contig3190.8593.1|Name=mRNA_H-paniculata_contig3190.8593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
MAMTSALAFMLATSPGSCHVRPKWQTAERHPQVDQMLQQVRRHQQCVLQA
PSVGDTGCWHLLTGLRATLSVCMEEDCLQQGAPQTLAKFRKNAAKRRDVT
VETCSCVGMCGLGPCVTIDWGEAGFETYGGVDPSDDATIAKLVDDATKPL
ARESQGPEGAGKKSYDSDPYAEQ* back to topmRNA from alignment at H-paniculata_contig3190:13598..16476- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3190.8593.1 ID=mRNA_H-paniculata_contig3190.8593.1|Name=mRNA_H-paniculata_contig3190.8593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2879bp|location=Sequence derived from alignment at H-paniculata_contig3190:13598..16476- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAAAACACGAGCAAACACTAATGATAGGTGGGCACAAATACAGTAACTG
GCTGTCACTACTGTAGCCTTCTACTAGGTTTCAAAGCGCCTCGCCTTCAA
TCTGAGTAAGTAGACCAGAATGGCCATGACCTCCGCCCTTGCGTTCATGC
TAGCAACGTCCCCGGGCTCGTGCCATGTGAGACCAAAATGGCAAACAGCA
GAGAGACATCCTCAGGTTGACCAAATGTTACAACAAGTTCGGCGTCACCA
ACAATGTGTTCTGCAAGCGCCATCCGTTGGGGATACAGGCTGCTGGCATC
TTCTGACCGGTCTAAGGGCCACACTCAGTGTATGTATGGAGGAGGATTGC
CTCCAGCAGGGAGCGCCGCAGACATTGGCCAAGTTTCGGAAGAATGCGGC
GAAACGACGAGACGTTACGGTATATTGTGGCGGAGGAGGGAATTTAGTTC
CAGGATCTGTATATTTTTTTCCAGTCTTCTGTTTCTCGCCGCAGGAAATA
TATTTAGGGTACACCGACATCACTCTACCTTGCTGCGACATGTAGGTGTA
CTGTGCAGATGCGCGGTTGTGCTGGAAACGTAGTTTTGCGGATAAGGTCA
ACAGACAATTGACGCGTGACACATTGATGTACTGTCTTGGTATCCTTCAT
CCTTTCAATGAATTGCAACGATTGAAGATTTCACTCTCGTAAGTCACACC
GGGTCACACTGAGTGAGATCATACTCCAGGCGATACTGACACAACGCCAA
TAGCTCCCCCAGAAGATTTTAATTAGATGGAACATAGCAAAGGGAGTCCT
AGAGCACAAAGTTACCGATGTCGTACAGGTTTCGGGGGGTATAGCCTCCA
ATTCGTTCCCGAATTTGAGGATTTCGTGTCCAGAACTCCGCAATTTGCAA
TCGGCGTCATCAAATGTCAATTTGACCAGGTGATGTCACCTTTTCAGTGA
TATCGTCAGCAATGGGGTGGAGAGAGAGAAAGAACTGTACCACCGCGTAG
CCCCTGTTCTTCGCTTTGTACTGGAACGACGATCTGTTCTCATGCGCACT
GTAATGTGCCAGTATCGACATCCCATTCCACAGACGGGGTGACTAACTGT
CAATTTAACGGTAGCATAGAAAATAATTGCGGGGTAGACAGCTTAAATAG
TGCCGTGACTTTTCCCGGCATTCCGTCAGTTCTTGTGTAACATGTCATGT
GTATAGGGAAGTCGAAGATCCTGTAAGCCAATAACGAATATTCATCAATC
TCTATTGCTTGCACCCGGTCGTCCCCGGATGGGCATTATGTCGCACATCT
AATCTTGGAATTACATGCCATTCAGCACGCCTAGTTTTGTGGAAGAACGG
CGGTTGAAGGCAATGTGAGTCATGACGTGACATCTGTTTTATATTTTTAC
GCCCGAATGAATGATGGCTCACTGACATTTAACTATCATGATTTTACCGC
GTTGTATTTAGTTCACAGCGCCGCATCGACGTTGGGTGACCGGAGAAAGC
ACCTGGCGGGTGATAAGACGCTTTCGAATTCGATCTTCTTGAAACCGACC
GTTCGGTGCCAATAGAGAGTAATTTAATTCCACTACGGACGCTGTGTCAT
TGCAAAGACCATATAGAGGTCTTTCGAAGGCCTTTTTCTCGGGCTGTAGT
AGGGTCGAAGATATTGATCCCAATCATGCTTACCTATTTGTGCCCCGCCC
ACCTCTCTTACCATATTGTGAAAGGTAGAGACGTGTTCCTGCGTTGGTAT
GTGCGGCTTAGGGCCTTGCGTGACGATCGACTGGGGTGAAGCGGGCTTCG
AGACTTACGGTGGGGTCGATCCAAGCGATGATGCGACAATCGCGAAGGTG
CCATGCTGTAGAAACAGCTGCTTTATGTGGGAGGGGGGGGGAGGGGGGGG
GGTTGCAGCACCGAGCACAGCGATCAAACGCCTGGTGTCGGGTTTTCGAC
TTTCTAGCGCATGCTAAGTCACCCGTGTGAATTATCTAACGATTGAGGGG
GGATCTATTTGTTAGATATGAATCTTCGCGCGGGGGTGGAGAACATACAA
GTCGTGTCCCCTCCGGGAAATTGCAACTTTTACGCTATTGTTTCTATTTT
ACACTACTCGAAACAGCAATCGGAAACCATACAGAGGGTGGTAAGGAAGG
GTCCCCGGGTTTCATATTCATGGAGCATGCTACCAAAATGTCCATTGTAA
ACCCCCTTTGATCGTTGAACGACTCGTGTGTCAAGCGTTATCCTTGAAAC
GAGACCGTGCCAGGGCATACTGTAGTTATTGCACGCACCAGTATCTTGTA
TCTCCATCCCTGCCTGACCACTGTTGTAAGTATCTGTGCTGACTGCCAAC
TCTTGGCACCGCGGTATCATAGATAGATACTGTTCAGCTACTAACGTGCT
GCATGCCACTCGCCGTCTTCATTGCCTTGTTTCTGTACCCTCTGTTCAAG
CTCGTGGACGACGCTACCAAACCGCTAGCTCGAGAATCTCAGGGACCAGA
AGGAGCCGGAAAAAAAAGTTACGACAGCGATCCCTATGCCGAGCAATGAC
GGCCGCGGCACATGTGTACGTGGTATATACAGATACCATATACTAGTAGT
TAGCCAAGGTGTGATTAACGCCGCGACAACGCTTGGATATTATACCCCGA
GAATGTCGCGAAACGGCGATCATCCTACCGTGCTGATTCCTAAGAATATC
GAACTTTAAAAGTTAGCTTGGGAGGTTTCAGTCCACGGAAGAGTGGTGTG
CGGAAGGAACGAAGCCATGCATTCAAACGCGACGCTTCTTTATCCTCTAC
AGGCTTGTCCTGTATTCTCCCGAGGGCAAGTGTTGTCCATGTGCGAATTC
TAGAATAGCGCTTGGAACATGGATACGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3190:13598..16476- >mRNA_H-paniculata_contig3190.8593.1 ID=mRNA_H-paniculata_contig3190.8593.1|Name=mRNA_H-paniculata_contig3190.8593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig3190:13598..16476- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCATGACCTCCGCCCTTGCGTTCATGCTAGCAACGTCCCCGGGCTC
GTGCCATGTGAGACCAAAATGGCAAACAGCAGAGAGACATCCTCAGGTTG
ACCAAATGTTACAACAAGTTCGGCGTCACCAACAATGTGTTCTGCAAGCG
CCATCCGTTGGGGATACAGGCTGCTGGCATCTTCTGACCGGTCTAAGGGC
CACACTCAGTGTATGTATGGAGGAGGATTGCCTCCAGCAGGGAGCGCCGC
AGACATTGGCCAAGTTTCGGAAGAATGCGGCGAAACGACGAGACGTTACG
ATGGCCATGACCTCCGCCCTTGCGTTCATGCTAGCAACGTCCCCGGGCTC
GTGCCATGTGAGACCAAAATGGCAAACAGCAGAGAGACATCCTCAGGTTG
ACCAAATGTTACAACAAGTTCGGCGTCACCAACAATGTGTTCTGCAAGCG
CCATCCGTTGGGGATACAGGCTGCTGGCATCTTCTGACCGGTCTAAGGGC
CACACTCAGTGTATGTATGGAGGAGGATTGCCTCCAGCAGGGAGCGCCGC
AGACATTGGCCAAGTTTCGGAAGAATGCGGCGAAACGACGAGACGTTACG
GTAGAGACGTGTTCCTGCGTTGGTATGTGCGGCTTAGGGCCTTGCGTGAC
GATCGACTGGGGTGAAGCGGGCTTCGAGACTTACGGTGGGGTCGATCCAA
GCGATGATGCGACAATCGCGAAGGTAGAGACGTGTTCCTGCGTTGGTATG
TGCGGCTTAGGGCCTTGCGTGACGATCGACTGGGGTGAAGCGGGCTTCGA
GACTTACGGTGGGGTCGATCCAAGCGATGATGCGACAATCGCGAAGCTCG
TGGACGACGCTACCAAACCGCTAGCTCGAGAATCTCAGGGACCAGAAGGA
GCCGGAAAAAAAAGTTACGACAGCGATCCCTATGCCGAGCAATGACTCGT
GGACGACGCTACCAAACCGCTAGCTCGAGAATCTCAGGGACCAGAAGGAG
CCGGAAAAAAAAGTTACGACAGCGATCCCTATGCCGAGCAATGA back to top
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