mRNA_H-paniculata_contig31799.8564.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 180 bits (456), Expect = 4.110e-54 Identity = 81/132 (61.36%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 13 QILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
Q+L +LQ+LGRGNCFDD+ Q SLMS+ A FHKFC+HFA EL+ E+I+LP G +++M YD+LG TGA+GSTDV HI W CP + R+YTG++GF TIAYQ TVDH+GRA+A T GF GATNDK+I+
Sbjct: 3 QVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIM 134
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.560e-52 Identity = 83/134 (61.94%), Postives = 104/134 (77.61%), Query Frame = 1
Query: 7 SYQILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
S +IL +LQ+LGRGNCFDD+ Q SLMS+ A FHKFC+HFA EL+ E+I+LP G +++M YD+LG TGA+GSTDV HI W CP + R+YTG++GF TIAYQ TVDH+GRA+A T GF GATNDK+II
Sbjct: 248 STKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTII 381
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 169 bits (428), Expect = 7.120e-49 Identity = 78/126 (61.90%), Postives = 96/126 (76.19%), Query Frame = 1
Query: 31 QVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
QVLG+GNCFDDV Q S MS+S AQ FHKFC HFA E++ E+I+LP G L+++M + QLG+TGA GSTDV HI W+ CP + R++TG++GF TIAY TVDH GR LA T GF GATNDK+II
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTII 167
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 170 bits (431), Expect = 1.190e-48 Identity = 80/135 (59.26%), Postives = 102/135 (75.56%), Query Frame = 1
Query: 10 YQILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQA--LEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
+++LA L +LGRGNCF + Q S MS T Q MFHKFC HFA E+Y E I LP ++ L+ +M +YD+LGFTGAVGS DV HI W CP + AR+YTG++GF TIAYQ TVDH+GRA+A T+GF G+TNDK+I+
Sbjct: 84 HKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIV 218
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5K6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N4_9PHAE) HSP 1 Score: 161 bits (408), Expect = 5.510e-48 Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 13 QILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKG 375
Q+L +LQ LGRGNCFDD+ Q SLMS+ A FHKFC+HFA EL+ E+I+LP G +++M YD+LG TGA+GSTDV HI W CP + R+YTG++GF TIAYQ TVDH+GRA+A T G
Sbjct: 3 QVLTTLQTLGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSG 123
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.310e-47 Identity = 77/135 (57.04%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 4 PSYQILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
P Q+LA LQ+L RGN F D+ S +S T FH+FC++FA ELY E ++LP G+ L K+M +YD++GF GAVGSTDV HI W CP + AR YTG++G T+A+Q TVDHSGR LA T+GF GATNDK+II
Sbjct: 80 PHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTII 214
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.780e-46 Identity = 76/127 (59.84%), Postives = 96/127 (75.59%), Query Frame = 1
Query: 28 LQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
L+VLG+GNCFDDV Q S MSES AQ +FHKFC H A E++ E+I+LP G L+++M + QLG TGA GSTDV HI + CP + R++TG++GF TIAY+ TVDH+GRALA T GF G TNDK+ I
Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTI 263
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 164 bits (415), Expect = 6.260e-46 Identity = 75/132 (56.82%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 13 QILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
++LA LQ+L RGNCF D+ S +S TA FH+F +FA E+Y E+IFLP G +K+M +YD+LGF+GA GSTDV HI W CP + AR+YTG++G+ T+AYQ TVDH+ R LA T GF G+TNDKSII
Sbjct: 158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSII 289
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.130e-45 Identity = 75/132 (56.82%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 13 QILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
++LA LQ+L RGN F D+ S +S T FH+FC++FA ELY E ++LP G+ L K+M +YD++GF GAVGSTDV HI W CP + AR YTG++G T+A+Q TVDHSGR LA T+GF GATNDK+II
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTII 305
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 160 bits (405), Expect = 3.120e-45 Identity = 73/135 (54.07%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 10 YQILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGENIFLPIGQ--ALEKLMHEYDQLGFTGAVGSTDVAHIKWDCCPCSFARTYTGRKGFATIAYQATVDHSGRALAATKGFPGATNDKSII 408
+++LA L +LGRGNCF + Q S MS T Q MFHKFC+HFA E+Y E+I+LP Q L+ +M +YD+LGF+GA+GS DV HI W CP + AR+YTG++G T+ YQ TV+H+GRA+A T+GF +TNDK+ +
Sbjct: 97 HKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTV 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31799.8564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31799.8564.1 >prot_H-paniculata_contig31799.8564.1 ID=prot_H-paniculata_contig31799.8564.1|Name=mRNA_H-paniculata_contig31799.8564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp SPSYQILASLQVLGRGNCFDDVSQFSLMSESTAQVMFHKFCEHFALELYGback to top mRNA from alignment at H-paniculata_contig31799:593..1000+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31799.8564.1 ID=mRNA_H-paniculata_contig31799.8564.1|Name=mRNA_H-paniculata_contig31799.8564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=408bp|location=Sequence derived from alignment at H-paniculata_contig31799:593..1000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31799:593..1000+ >mRNA_H-paniculata_contig31799.8564.1 ID=mRNA_H-paniculata_contig31799.8564.1|Name=mRNA_H-paniculata_contig31799.8564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig31799:593..1000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |