mRNA_H-paniculata_contig3179.8562.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3179.8562.1
Unique NamemRNA_H-paniculata_contig3179.8562.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 3.690e-66
Identity = 122/253 (48.22%), Postives = 168/253 (66.40%), Query Frame = 2 
Query:  536 EAATIAAMSD--CKVDFYVIGSQGGEPVATMCRTVFTIVTISLISSWCIQSSKVKKLLLFFSHWLSGLIHELADLIMNTMVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKD 1288
            +AA  A M    C   F+V+G Q GE V T  R + T++T+S+ S+W  +   +KKLLLFFSHWLSGL+H+L  +   TMVSVCW+       IKT KF ELA++NMLA+          LIV SHRT++RV+S S+P +IL FL +S+ + AIS  FW +M VS T +W ++H QA  DWI+++ F VEF VG+ ML++V  L++FR  E+++ WK+H RIRYYFGLT IA  VNLA+G  G + V+   K+
Sbjct:   20 QAALYAEMFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 2.000e-65
Identity = 128/284 (45.07%), Postives = 185/284 (65.14%), Query Frame = 2 
Query:  566 CKVDFYVIGSQGGEPVATMCRTVFTIVTISLISSWCIQSSKVKKLLLFFSHWLSGLIHELADLIMNTMVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKDWGVLISVSWGMRHMHIALDTLVLYGVLGGSSRDMDERGG-ARS 1414
            C+  F  IG Q GE   T  R + T+V++S++S+WC   +KVK+L LFF+HWLSGL+  L  ++ + MV+VCW+ S+    IK  KF+E  S+NM+A+          LIVSSHRT+TRVQS+SSP ++   L +SI +T+++   WE + V  T +W  + +Q   D +++S+F +EF+VG+ M +++  LLLFR+ EV+ECW++  RIRYYF LT +   VN+ +G    V V+ G  D   L   SW  R++H+ALDT VLYGVL    +DMDERGG ARS
Sbjct:    7 CETGFTAIGLQEGEDKITPIRVLSTLVSVSVVSAWC-SWTKVKRLSLFFAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVI-GDMDEPRLAIWSWVSRYIHVALDTFVLYGVL--REKDMDERGGNARS 286
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 3.350e-50
Identity = 101/218 (46.33%), Postives = 141/218 (64.68%), Query Frame = 2 
Query:  761 NTMVSVCW--SRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKDWGVLISVSWGMRHMHIALDTLVLYGVLGGSSRDMDERGGA 1408
             TM+SVCW   R E F  IK  K+LE  S+NMLA+          L+V+SHRT++RV S+S+P ++L FL +S+   A S  FW    VS T +W  + ++A+ DWI++S+ ++EFVVG+ M ++V  L+ FR+  ++ECWKLH RIRYYF LT I   VNLA+G  G   V         L+S++W  R+ H+ALDT+VLYGVLG  +R MDE GG+
Sbjct:    6 GTMISVCWVGERLEGF--IKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRA-NAGEYLLSLTWAFRYAHVALDTIVLYGVLG--TRHMDEGGGS 218
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 9.950e-50
Identity = 98/202 (48.51%), Postives = 134/202 (66.34%), Query Frame = 2 
Query:  767 MVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKDWGVLISVSWGMRHMHIALDTLVLYGVLG 1372
            MV VCW+ S     +K  KFLEL ++NMLA+          L++ SHRT+ RV+S SSP ++   L VSIA+   +A FW+   VS T +  R+ +Q   DW+ +S F +EF+VG+ M ++V  LLLFR+ EV+ECWK+H RIRYYFGLT I   VNLA+G  G + V+ G ++  +LI ++W  RH+HIALDT VLYGVLG
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVV-GGREKSLLIVLTWTFRHIHIALDTFVLYGVLG 201
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 9.840e-48
Identity = 102/227 (44.93%), Postives = 147/227 (64.76%), Query Frame = 2 
Query:  725 SGLIHELADLIMNTMVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKDWGVLISVSWGMRHMHIALDTLVLYGVLGGSSRDMDERGG 1405
            +G+I  L  L+ + MV+VCW+       IKT KF+ELAS++MLA+          LIVSSHRT+ RVQS+SSP ++   L +S+ +TA +   WE + V  T +W  + +Q + D +++S+F +EF+VG+ M ++V  LLLFRL EV+ECW++H RIRYY  LT +   ++L++G    V VL G K   + I  +W  R++HIALDT VLYGVL    +DMDER G
Sbjct:   10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIW-AWVFRYIHIALDTFVLYGVL--REKDMDERVG 233
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 5.490e-43
Identity = 91/211 (43.13%), Postives = 133/211 (63.03%), Query Frame = 2 
Query:  767 MVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKDWGVLISVSWGMRHMHIALDTLVLYGVLGGSSRDMDER 1399
            M+SVCW+       IKT KFLEL ++NMLA+          LIV S R  + V+S+S+ K++L FL +S  L AI+  FW    +S T +W    N+   +++MIS F+VEF+VG+ M ++V  LLLFR+ E++ECW +H  +RYYFGLT +  V NL +G  G + V+     W +L+  SWG R + IALDT+VL+ VL  +++ +DER
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMA-WPLLMIFSWGFRQVRIALDTIVLHSVL--ATKSVDER 208
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.680e-39
Identity = 91/226 (40.27%), Postives = 134/226 (59.29%), Query Frame = 2 
Query:  725 SGLIHELADLIMNTMVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKD-----WGVLISVSWGMRHMHIALDTLVLYGVLGGSSRD 1387
            SG +  LA +  + MVS C++ +     IKT  F+ + S+NMLA           LIVSSHRTMTRV+++SSP+++   L+VS +L A +   WE   V  T +W  + +  + D+I++S++++EF+VG+ ML++V  L +FR+ E++ECW+ H RIRYYF LT     VNL +G  G   V    K+     W      SW  R++HI+ DTLVLYG L   S D
Sbjct:    9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIW------SWLFRYIHISFDTLVLYGALREGSID 228
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 7.960e-39
Identity = 77/167 (46.11%), Postives = 112/167 (67.07%), Query Frame = 2 
Query:  767 MVSVCW--SRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGM 1261
            M+SVCW   R E F  IK  K+LE  S+NMLA+          L+V+SHRT++RV+S+S+P ++L FL +S+   A S  FW    VS T +W  + ++A+ DWI++S+ ++EFVVG+ M ++V  L+ FR+  ++ECWK+H RIRYYF LT IA  VNLA+G  G+
Sbjct:    1 MISVCWVGERLEGF--IKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGL 165
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.350e-38
Identity = 87/176 (49.43%), Postives = 114/176 (64.77%), Query Frame = 2 
Query:  764 TMVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTR-VQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKD 1288
            TM+SVCW+ +     IKTFKFLELAS NMLA+          L+V SH      V SLSSP +I+  LV+SI   A +A FWE + +S T ++  + NQ   DWI IS F +EF VG+ M ++V  LLLFR+ E++ECWK+H RIRYYFGLT IA  VNL +G  G V+ L+G ++
Sbjct:    4 TMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICG-VIYLIGDRE 178
[Close]
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 7.140e-37
Identity = 78/169 (46.15%), Postives = 110/169 (65.09%), Query Frame = 2 
Query:  767 MVSVCWSRSEAFFTIKTFKFLELASTNMLAVXXXXXXXXXXLIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFWEDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRLPEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVL 1273
            M+SVCW+       IK  KFLELAS NMLAV          L+V SHRT++RV SLSSP++I   LV+++   A +   W+ + ++ T +   S ++  +DW ++S FL EF+VG+ M+ +V  LLLFR+ E++ECWK+H RIRYYFGLT IA  VNL +G  G V ++
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIV 169
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3179.8562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LNM4_ECTSI3.690e-6648.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK5_ECTSI2.000e-6545.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8K6_9PHAE3.350e-5046.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN1_ECTSI9.950e-5048.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTK4_ECTSI9.840e-4844.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNP0_ECTSI5.490e-4343.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JWL8_9PHAE1.680e-3940.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN2_ECTSI7.960e-3946.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM5_ECTSI2.350e-3849.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE7.140e-3746.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3179contigH-paniculata_contig3179:4488..15373 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size2776
Cds size1032
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3179.8562.1prot_H-paniculata_contig3179.8562.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3179 5044..14185 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929978.8615308-UTR-H-paniculata_contig3179:4487..50431622929978.8615308-UTR-H-paniculata_contig3179:4487..5043Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3179 4488..5043 +
1691481095.5058732-UTR-H-paniculata_contig3179:4487..50431691481095.5058732-UTR-H-paniculata_contig3179:4487..5043Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3179 4488..5043 +
1622929978.9441504-UTR-H-paniculata_contig3179:14185..153731622929978.9441504-UTR-H-paniculata_contig3179:14185..15373Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3179 14186..15373 +
1691481095.5851626-UTR-H-paniculata_contig3179:14185..153731691481095.5851626-UTR-H-paniculata_contig3179:14185..15373Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3179 14186..15373 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929978.872146-CDS-H-paniculata_contig3179:5043..52131622929978.872146-CDS-H-paniculata_contig3179:5043..5213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 5044..5213 +
1691481095.5154238-CDS-H-paniculata_contig3179:5043..52131691481095.5154238-CDS-H-paniculata_contig3179:5043..5213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 5044..5213 +
1622929978.881788-CDS-H-paniculata_contig3179:7786..79611622929978.881788-CDS-H-paniculata_contig3179:7786..7961Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 7787..7961 +
1691481095.5245893-CDS-H-paniculata_contig3179:7786..79611691481095.5245893-CDS-H-paniculata_contig3179:7786..7961Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 7787..7961 +
1622929978.8937001-CDS-H-paniculata_contig3179:10099..102551622929978.8937001-CDS-H-paniculata_contig3179:10099..10255Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 10100..10255 +
1691481095.5342007-CDS-H-paniculata_contig3179:10099..102551691481095.5342007-CDS-H-paniculata_contig3179:10099..10255Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 10100..10255 +
1622929978.9072347-CDS-H-paniculata_contig3179:11531..117641622929978.9072347-CDS-H-paniculata_contig3179:11531..11764Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 11532..11764 +
1691481095.5442128-CDS-H-paniculata_contig3179:11531..117641691481095.5442128-CDS-H-paniculata_contig3179:11531..11764Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 11532..11764 +
1622929978.918078-CDS-H-paniculata_contig3179:12925..130201622929978.918078-CDS-H-paniculata_contig3179:12925..13020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 12926..13020 +
1691481095.5539262-CDS-H-paniculata_contig3179:12925..130201691481095.5539262-CDS-H-paniculata_contig3179:12925..13020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 12926..13020 +
1622929978.9311216-CDS-H-paniculata_contig3179:13982..141851622929978.9311216-CDS-H-paniculata_contig3179:13982..14185Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 13983..14185 +
1691481095.570008-CDS-H-paniculata_contig3179:13982..141851691481095.570008-CDS-H-paniculata_contig3179:13982..14185Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3179 13983..14185 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3179.8562.1

>prot_H-paniculata_contig3179.8562.1 ID=prot_H-paniculata_contig3179.8562.1|Name=mRNA_H-paniculata_contig3179.8562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
MSDCKVDFYVIGSQGGEPVATMCRTVFTIVTISLISSWCIQSSKVKKLLL
FFSHWLSGLIHELADLIMNTMVSVCWSRSEAFFTIKTFKFLELASTNMLA
VTNLAICVNLALIVSSHRTMTRVQSLSSPKIILGFLVVSIALTAISAAFW
EDMAVSQTLYWARSHNQAQMDWIMISLFLVEFVVGVLMLLVVGMLLLFRL
PEVRECWKLHRRIRYYFGLTGIAIVVNLAVGFGGMVVVLLGWKDWGVLIS
VSWGMRHMHIALDTLVLYGVLGGSSRDMDERGGARSEHSEMADVSRKQDN
KPAGGKHMKWKVTHGETSSSASAGDCPTPTSSSIQAAPMCASV*
back to top

mRNA from alignment at H-paniculata_contig3179:4488..15373+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3179.8562.1 ID=mRNA_H-paniculata_contig3179.8562.1|Name=mRNA_H-paniculata_contig3179.8562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10886bp|location=Sequence derived from alignment at H-paniculata_contig3179:4488..15373+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTAAAATGTCAACCATTTCTTAATTTTCTACAAAGATCTGGGGTTAAGT
TTCCAAGGTCTACTAACTTTAACACGTCATGCGATAGAATTTTTGTTGAG
ATCCCGCAGGGGCTGGCGGGGGGTCAGCCGAGTCGAGCACTCACCCACAG
TTGTTCTCGTCAACACAAACAACAAACAATCTAAGCGGCACATTAATAGA
GGTTCGAAGGGTCATTGGCGATGCACAGTACAGCACCCGCGGCACTTTGA
AAGAATTTTGTACCATCTGGTCACACGTGCACACCGAATAATTCAGTGAC
ACTGATACAGTCAGTCCTGGACGGTGCCGACAATCCGGGGGTACATAGCT
TTATTTGAAATACTCCAGCGACGAGGGTTAGCTATTATCGCTTTCGGTAT
CGTTGATTTCCGATCGGGGACACACACCCTTGCACCGACAGCCCCGTCCA
CACGGATTATATCTCCCTTCGATACGCCGACCGTAAGGGGGAGAGGAAGA
CACGCAGTTTCTCTGGATCCGAGGTTCGGGTGGAAGAAGCAGCGACAATA
GCAGCCATGTCGGACTGCAAGGTAGATTTCTATGTGATCGGTTCCCAGGG
AGGCGAGCCAGTGGCGACAATGTGTCGTACAGTGTTCACCATCGTCACCA
TCAGCTTGATATCTTCTTGGTGCATCCAATCGTCCAAAGTCAAGAAACTG
CTGCTTTTCTTCTCTCACTGGTTGAGGTATGTGGTCACGGCCTTCAACTA
GGGTGATGTGTTTGTGTCGTTTTTGCGTGCCTCCTGCAGGCAGCAAGGAG
TAGGGTCTAACGACACGACAAAGATCGTGACTAGTATTTTGCAGTTTAGC
CTATTTTTCGGCTTCCGCGTACTTGAACTCACAGCTGAATGCAGAATACT
GAGACTCTGGGACACCTCTGACCGTTTATGACCTGGAGAGACAATTGTTC
GACAGTATTTGGAGTTGCTATTTTTAATTGCAAACACAATCAAGCCAGAC
TCCATGCATACATGCAAACCTCTCCCTTACTGCGTTCAGCCGAGTTTCTA
CGCTTCATTTTCCCTATCCAGTGTTGTTTGTGCGCGACACATCTGACTCG
CTGATGGTAATAATTGTTAATAATTGTTAATAATCACTGCACTCGCCATA
CTGTATTGCACTGCTTTGCGGGTGATTTGCTGGGACAGGAAAAATGACTA
GTGTAACTCTCCGGGGTGCTGGAGGCTGTTTCGGAACAAAAATGCATCAT
CATCTGTCGATCGATTTCTGCAGTCGCTTTCGCGCAGTGTCAACCATGCC
AACAACCTGCTATCGGTGCTGTGTATATACTGTCGGCTCTGGACCGCCTC
TCTCAACACGATAACACCCTTTCCACGTGATCATGTCGCACATAGAGGTT
GCGTTTCCTCCGTCTGGAGTAAAATCATATGACATTTCGAATGTATTTAT
GTGTCCATCCATGTATTTATGTATTTATGCATGTATGTAGTTTGTCTGTG
CGCAGAGGCGCACCCAAAGGGTGACACACTAAACTGGACCAAAACGCGCG
TGTCACCTCTGGAATGCTGCGGACAGTCAGTAGAGTACAGTAGAGTACAG
TGTTTTTAGGTTGATTAAAGCTGGTTTTGGTCACTTGTTGGGCCACAGCG
TATACATATCTGTTTGGCCACTCCTCTGTCGACATATCAATGATTTGTAG
CGTGAGAGGGCTCCAGCCTGCTCCTCCCTTCATTTTGTCCTTCTGAACTA
CTACCGGGGATTTCTCACTTGAATAAAACGGCATGAAAGTTCAAATCAAG
AAGGCGATAAATATTGTAGATACTGCACGCCCCAACAGGCCCGAGTTGGA
GCGGAAGGGCTTGATTTCGATCGGTTTTACCCGTCGGGAAGTTCCACATA
CCGCACACAGCATGAATATAGAGATACACTGACGATCCGTTCTGGGGACG
AAGTGTAGCGCTTCAGTTGATTGCATCGCTACTGTTGTCTTGTGTTTATT
TGCGATCGAGCTGTTGCATCCATTTCATACATTGTGCCTGTAGTAGTAGA
TCAATATTTAACCCTCTGGAGTACGTACTCTGATGATATAAACGAGCTAG
TCAAAACTTCGTCAACTGTGGGATTGCGTGCTAAGAGACGTTTTCGTACG
CACGTGTAAGCGAAGAATTCCCGTCTTGGATTTGATTCGGGACAGATGTA
TGTATCTGTATCTTATGTATTATTTAGATGAGGCTTCTATTCGTCCATTC
ATGTGGCCATTTGCACCCGTAGTTGATGGTTCATGTCTACAGCCGGTTGT
CGACAGGGTGAGTGCTTTGTGCTTTGAACCGCCAGGTTTCCACACACTAT
CCCGGGTTATTGAAGGGCTTAATTTCTGAGTACGGGCAGCCAAAAAGCTG
TCTGTTCCTTCCTAAACAACGCACTGACCAGAAAGCAGCTAGCATTAATT
GCCAACACCATCCACGTCTCTTCGTGTGAATTATTATTATTCCTTTTCGG
AACATGTTGCCGACAGAATTCCTCCAGAAAACAAGCCCTATAGAAACAGA
TACCTACCAACCCTCGCATATGTGCTAATGAACCCTAGATGAGACGCCTT
GGTGTTTCATAAGCGGCTTCTTTACGAGGAACTTGAGCGCTGTATGCAGG
GAGCTCAGCTGCTATATTACTCTTAACGTAAGTCTCCTTTTCTTTGGTGG
TCTAGGGACGGTTTAGGGACCAACGCGATTATGTATGAGTGAACGGGCCT
ATGTGTACCTGGGAGTAGGTCAAGTGCATGACATATGATACATTTGGTAT
GTGTACAGGGCACACAAGTAGTCCCGATCATCTGCGCTCCCTGTAATCAC
ATACTTCCGAAGGCCTCTTGAAGATGAGGGGGTTTACCCCGCAGGTAGAA
GGTTTCACTTTCTCAAATGAACGGTACTACTGTCTTGCCCATTCATCTAT
GTGGGAATTCCCCTGTGCCTTCTTTTATTGTCTGTACGAAATCGCTGTTT
CGCGGTTGCTATCATGAGTTCAACTGACGAACAGTGTATATATTTTGAAC
AGCAATGGTCGAGTGTTGGAACCTAACAACCCTGAACCACCGATTATCGG
GGTACCGATCACACTTTGTCGTCTGTTGTGTCTCTCTCGTTCTCTCTGTT
TCCTTTCCCTCCTCGTGTCTCTCTCTCTCCAACTCTCGTGGCGGGGCGTA
TGTATGTACAATCTTTCGCATTCGATGTGGCGCGGCGGGGCCTCTTATTT
TTACACTGATTATCCGGCATATGGCATCAATTGGCTTCGATTTCAACAGC
GGGCTCATCCATGAGCTGGCCGACTTGATCATGAACACGATGGTGTCGGT
TTGCTGGTCAAGATCAGAGGCGTTCTTCACGATCAAAACGTTTAAGTTCC
TGGAGTTGGCATCTACGAACATGCTGGCGGTGACAAATCTGGCCATCTGC
GTAAATCTCGCCCTCATCGTCTCGGTGAGTGGTTGGCGACGCAGGCGAGC
TCGCACGCGTGGACGTGGGCGCGCGCGCGCGGGGGGGGTGCGGGACAAAA
CTGAGAAGAGATAATTATGGCAAGGAGGCAGTCGCAAACTATGCTGAGGG
CATGTTTTGAATCAACCCATGTATGTGTAGCCCATACATACTCAATCGCA
AATCATACGCTTCTGCGGGACCACAACATGGAAGAAAGGACGGACAGGGA
AACTGGTGGGGTATCGGCACGTTGTTACATGGTTCTGCACGCGTGCCATC
TCCCTCGGTTGTGGCGTGGTATTGCTGCGCATTCATTGCCATTTGTGCAA
AGACATACAGTTGTGTTGTGTATTTCTCAGGTAGGATTTTCCTCTGCTGT
TGGATTCTCGTACGTCGTCCCTACGGCATTTTTTTTTAATGTTCTGAGAT
GCGGTGGGAGCAAACAGAGGGCGCAAAAGCCACCGTTGGAGAAAGTATAC
AGCAGCAAGTTGATAACATGAAACGACAGTCGGTGCCGGCAATTTATTGC
CGTTGGTATTCTAATGAGATCGTTGAGAGGACTTTTGCTTTGGATTTTGT
CTGAGGGGAGAATCGGCAATCACCCGACTCACTGATGTCCTAATACGTCC
AAATAAACGAGGCATTCCACACTTTAGGTGTTCAACTGTTGTGTTTTAAA
CCTCAAAATGGTACCAGTGCTAACTGTTTCCGGCCGATGGGAAAATTTTC
GTGTTGATTGCTGTCTATCGTACCTTGGGTTATTTTTCGTTTGTTTGGCA
ATCAATTCGGATTCCGGCGCGGGTAGACAAAATGCAAGAGCACCGAGGAC
CGAGAAGATTTCATTCTCACACTCTCACGTCGGCGCTCGCCCTGCCTTAA
AGTTGTATGTGTTTCATCCACATGTTCAACATATCAAATTCTACAATTTT
GATTTTTTCGGAGCGTTGCACACGTCGCACAGAATAGCTCTTTTGTCGCT
GTAGAAACTCCGTGGCGAACACCCTACAGCATTCCTGGTAGACCAAATAG
AGCAGCCAGAAAGCTTGCTCCTGCCCAGCAAATCGACACAACAGTACGGG
CTGTTGTATAACGTGTTTCTCGAGGGGTATGTTTGATTGTTCTGTCATGT
TCCGTTCTGTTCCGTTCCGTTCCGTTCTGTTTTTGTCCGACGGACATTTG
GTTTTTTCCTTTTGTTTCATCCGATGTCGAGATTTACAGTAGTACAATAA
ATGCAGACAAAAAATACGTTGCAGTAGTACAGCACACACAATACGCAAAT
AAATGAGTAAGACCCTTGTTGTTAAGACAGATTTTGAGATGGAGAAAGAT
AGGGAGGTTTCTGCTTGTCGTTTGTCTAGAAATCTTCCTACAATTACCTT
GTTGAATAATATATATGTATATATATATAATATATATGTGTTAGGAATTC
CATAATACTTGTGGACAGGGTCTATTTCTGCGAGTGGTGTGTGGGACAAG
TATTGCGGCTGCAATTTTCAGGCCATTTTAGCGGCACCAAAATGAGAAAT
GAAATTGAGCAGGGATGGGAGTAGGTACGCCCCGGTAGCACTAAGCGATT
ACAACGGCTAATCACAGGACCACGGAACCCTCACAGGACAGACTGCCTCG
TCGTGACGTGGTCACGTTGACCGTCCGACGTCACTGATAGGAAACATATT
TCCGCGGAAAGGTTGCTCTTTGGCATTCATTCATTATTCACCATTTTGAG
AGAAGTTGCATGTGTGATCTGTCGATCATCATACGCAGGCGTGGTGCCGC
CCTTGTGTTTTGGTTTTTCCTTGATATTCATGACCATACATTTCATACAA
TATCATGATGAAAATATTTTGTTTCGTTTTCTGTGTTTAATGTGAATCAA
GTATTGTTTTTGAATTCTCTTTGAGTCTGCATGTTATTATGTGGAAAAAG
CAAATACAATTTTTAATATCCTTTTTTTTTTTTTTTTTCCTTGACGAAGC
CGTTAGAGGTGCGACCACAGACATCGTTGTGGAATACTATTAGTGTGCAG
CTACTACAGTAGTACTCGTACACCTTGGGGTCCGCTCGAGGTGCCATTCT
TTCCCTCTCTTTTCCCTGATCACGTCGTCACGTGTCGTTCTTGTTTTTAA
TTCTACGCACAGAGTCATCGAACGATGACCCGAGTTCAAAGCTTGAGCTC
GCCGAAGATCATTCTCGGCTTCCTCGTGGTGTCCATCGCGCTCACGGCGA
TATCCGCAGCCTTCTGGGAGGACATGGCCGTCAGCCAAACCTTGTACTGG
GCACGGAGCCACAATCAGGTGAGAGCTGAATTACTCGGGGAATTTGTTTT
TGAGAAGTTCTAATTTCTTCTAGGAAGAATCCAAATAAAAATCCAGTGTT
ATGGGATGTTAATTGCGGGACGTGACAGTCAGTGTCTAATGTGATGGTTC
CATCCCTAATCCCCAGGTTTATGTAATGTAGCCTCAGTTTGAGCTGGAAG
CAGGAAGCACGGACCGTGTTACCACCCCACCAAACTCTCAGACTTGTATC
GACACAGGGTTGTTCCTGACGTACAGCAATATGCAGCTTATACAAGAGAC
CAGACCGTTGCCAAGGACTAGTCTGATACTATTGATTTAAAATCGGTAAA
TGCTCTGTATCGGGCCAGATGGAGATCCGGCCCATCCATCCAAAGAACTT
GCCCATTTTTCCAACTTTACCGGACTGGAGTAACGGATCGCTGCTCATGA
GAAATTAAACAAAAATCGGGGCTTAGGCCGGTTCTTATGGTGTTGAAAAG
CAACTCGGAAAATCACCCTTTTATCCTTTGCCGTCGTTTTCCTCCCGAAG
AGCGGGACATCCGGCGTTTGCTACCTCGGAACGAATTCATCTAAGGAGTA
AGGTATCTGGCACGCGTTTCCGTTTCCCGAGGCGTTTAGTTTGAATTTGG
GTGGAATTTGGGACAAACCCTCGGGGATCTGTATATATATACATCCCAAT
TCCGCCCACAGTCAAACTATACGCCTCGGGAAATGGAGAGAGTGTGCCCG
AATTCCCTTGCTCCCTGGAAGAAATCGTTCCGAGGTGGCGGAAGCCGGAT
ATCCCGCTCTCCGGGGGAAAAACGAGGGCAAAGAGTAGAATATATATATA
TATATATATATATATATTTCCGATTGACTGTATTGTGTCCAAAACTTTCA
AAAGCGACTGTAAGAGCCTCAAAACCTTGTTTCGGCAAGGATCATAGCCA
GTAGCATTGATTCTGACATCAATTGAGGAATTAACATAGGGGCATCATTT
GAGCCTCGTTTTCTTAGTCTGGATTCCTTACCTGTCGGCAAAGGCTCGGT
CTGACGTCCTTACGACGGATTTTTGATTCGAAAATTGAGAACGATGTGTT
TTGCCCCATGACACAAGGCTTACATATTTTACATTGGAGATGCGTATACA
TATTAGCTCTCTCCGTACAAGAAGATATTCTACACAACGTGGCAGGCATC
GTAGACCATCGACACGTTCATAAATTTGTAAGATCAACGCACTGACTGGA
CCTGTTTCCACACATATCTTCTCTTTTTTCAACCGCACGGTCAGGCGCAA
ATGGATTGGATCATGATCTCTTTATTTTTGGTCGAGTTTGTCGTGGGCGT
GCTAATGCTGCTTGTAGTCGGTATGCTGCTGCTGTTTAGACTGCCGGAAG
TACGAGAGTGCTGGAAGTTGCACCGCCGCATCCGCTATTACTTCGGGCTT
ACTGGCATCGCAATCGTGGTCAACTTGGCTGTCGGCTTCGGGGGAATGGT
GGTGGTATTGCTGGGTTGGAAAGACTGGTGAGCAAGGACAGCTGTTTTAT
GTACCGTGTGTATTGATAAATATTGGGGGTGGCAGCCTGGGTTGGATTTT
GTCGGGTCCAACTGCCTTCCTGCTCGCATCCATGCCCAGCGTCTCTCTCT
CAGCTTGGCCAGTGTCGGCTCAGCTGCGAGGAACAACTCTACTGGTGTCT
GCGGGACGCGCCCCGCCTCGATGGGGTCAATGATGTCCACCTTGGTGTTG
AGCATTTTATGGGGGGATAACGCTAAAGCTAGTAACTCCATTGCACAGCG
AAAATTAAGTTCAAAGAGAAGAGGTCACTTCGATCTTTAGGACATGAGTG
CCCATCGGCTATGTCCAAATACGTTGATCTCGTGAACCATTACATTTTTT
TTTTCGGCCTCTCGTCTTACCGACACGCAAATGACGTGTTTACTCGGAGG
CCATCGTGCCGGCATTCGTCAAAAGAGTCATTTTTGAAACCTTAAAAAAG
GAGTGTATTTTGTGCAAAAATTCAAGGATGAGACTGAAGGACCTGGGAGA
GAGGACTAGCGGGGGGAGCGGGAGGGGGGTTCTACGTGGGTGACAGTGCT
TCTTAGTATCAATGCAATGATAATGGAGAATGAAACATCGTACGCGTGCG
ATACACGAGCAAAAACCTCGAGAAATGAATGGACTCTTGTGGTTTCTGCT
GATGCGTAAATACAATATCTATAGTACAGCGGTTTCCCCTTTTGCGGAAG
TATCCTTTTTGTTGTTGTTGTTGTCGTCGTGCTTAATTCGTGCACTCTCT
CCGTCTCATTGCTGCGTATTGTAACGCTAATTATCAGTGCTCTGGAAACG
ATGGGTATTGCATTGCACTTGAGCTGCTGGTTGCACGATTTTTAGTCCAC
CTGTACTGAAGAGGAACGGAAGAAAAACGATTTTCTCGCGGCGATCAATC
AACACCCTCAGCTGTGTTGAGCCCCTTTCTTATGATGGATGGAAGTGCTC
ATTGTCACGTTGCAAACAGAAAATTGCGGGCACCGCCGATAGATAGCAAG
GCGAAACTTGCGTGGGAAAGTATTTCATGGGGATTCTTTAGGAGGCGAAG
GGACACAGCCACTGCCGTGTGTTCAACCCCTCCCCCCGCTCCCCGCCCTC
CCCACCGAACGCGTTGAACGTATTATCGATTTTGCTAGGGGGGTGCTCAT
ATCCGTCAGCTGGGGAATGAGACACATGCACATCGCTCTCGACACTTTGG
TGCTCTACGGCGTACTGGGTGGCTCCTCGAGAGGTACAAGAAAACCTGGC
GGTTTGATTACCTCCATCCCGTGCTGTTGCGGACACTATATCGCATCAAT
GGCAAGGAGAAATGTTTCGGGAAAGTACATGTTGGTTTTCGTTCTCGTGA
GGTTTTAGCTGAATGGCTGCGATAGGAAAGGATCCATCTCCCGAACAGAT
ACGAATACTCGGCGTATGAGTCATGAAAATTAAGTAACTATTCGCCTGAG
TTTCAGAATAAGTGAGCATATGGAATAAAGTACCCCGCCCTGGCCACCCG
ATTTTACGAGTACTGTTTGCAGTCGTGGATGGTCTGGAGCACATATAATA
CGTGAGCTATTTCTAAAACACGGACGAATAGTTGTTAGTTTTCAATGCGA
ATACACCAAGTGTTCGAATTTGTCCGGGGGGTGAAAGGTTTGCTCCACAC
ACGTGGGTGAAGGAGCTAGTTGACGATTTCCCGTCATGGCGATATCATGA
AATAGACCTATTGCTCCTTTCAGCTTGATTAACGTGCAAACACCAATGTT
GTCAAAATGACTCAAGTGTTCCGTGATGTGCTGTTTGAAGGTTTGCTCTC
TTAGGTCGGGGGCTGTTTAGGGGGCGTGTTTTTATATCCGGCTGGCTACA
CATGATTATACCTCATCCGGCGGAGAGCTGGCGTCGTTCGGACCCCAGTA
GCAATTCAGGAAGTGGGAGCACACAATGGGAAACCACAGCTCTTAGCAAT
AATACCTGCAGAAACCATAGGTGTCAAAAGCAACACCGGATAGTAAAGTG
TCCAACGATACAGATTGTCAGAGCGGTGAGTTTTGACAGTCAAATACGTT
CGTCCACCCTGCTTGACAGCTGAAGTCACCGAATGTCGCCTGTCATGACT
TGCACCAAGGCCGTTTATAAGCACTAATAGCAACACATGAGAGAACCAAC
TCCCTCCCTCCTTCCTTCCCTACGGCGAATCTAACTTAACCGCAGACATG
GACGAGCGTGGGGGGGCGCGCTCAGAGCATTCGGAGATGGCCGATGTTTC
CAGGAAGCAAGACAACAAACCGGCCGGCGGCAAACACATGAAATGGAAAG
TGACGCATGGGGAAACGAGCAGCTCTGCCTCGGCCGGGGACTGTCCCACC
CCCACCTCTTCCTCTATACAGGCGGCACCCATGTGCGCAAGCGTCTAAAG
TCTAAAAAGGCATATATTTCGACAGGGGGTTGAGGGTCAGGGGGAGGAAA
GGGAGGGGGAGACAACTAATTATCGGGCATATCATGAGATAGGGGTTAGC
TAATCTCGCACACCCGTGCCAAGCCGGGATGTAGGGGTTGCGCCAGTTTT
CCGCCGTGGTCCAGACAACGTTTCACTGGGAAAGGGGTGATTGTTTTATT
TCTTATTTTTGCTGTGCTTCCGTAGTAGTCATCGTTCTTGAGTTGCCACG
CCAAACCGTGTTTGCCAAAACGGTTTGCTGGGCATCTCTGAGCGTCTAAA
GATTGCCGTAGTCGGCGGGTGTTGGGGAGGGGAGAAAGGAGGAGAGTGGG
GTGAGGGGGCTAACGGGGAAGACGTACTCTGCAGAGCCCCACGCCCGTAT
CGGAATGCGGGGGTGTGTGAGCACGCGATATCACGTCGGTTTTGTTCGTT
GGTCGAGGGAAGTGGTGTCCTTACATACAACCGTAGTAGATTACATACTA
CTGTAGTAGAAGTACGGCACATGGATATGAAAGATAGCAAACGGCTTTAA
TTGTACAGAGACTTTTTTCTCCCTTTTTGCCCCCCTTTTTTGTCATGTTA
CTGTTGGTTCCGTCGGTTATTTGTTACCAGTCGAATCTTTTACAAGACAC
GTTTTAGTGGAGTCACACATATCCCCCCCTGTTCTTCTGTTTTATCCAAC
AGCTATTGTACTTACTTCTGATTACTGTACGTCTTCGTCCGAGTTTCTTT
CGTACGAACTGGCATCATGGACACTTTGCATGGTGCCGCACCCAAATCAC
CTATTATTACTGAGCGGGCGTACGCATGGGGTACACGGCAGCAGTGTTTT
TTTTTTTTTTGTTACCTCCACATACAGTTCATTTGTATGTGTGCGGAAGT
CTGACGAAACTTTTTAGCGGGCACTGGTAGCCTAGATGCGCCAATTTTTT
TTATAGAAAGGGAAGAGCTGGATTTTGATCCTCAAGTCAAAGAGGGGTCG
TTGTTCCCCATTTCAGGTACAATCTATTATTGTTTTCTACAGCTTCCGCA
TCAGCGCCGTATCCGAGTCTGCATATTGTCGGAAAGGCAACTATTAATAA
ATATTGTGTAGGAGTCACTTGCCAAAAACAGACGGCGATGCTTCGCGGCT
CGCCAGGCTCCCGGAGGGTTATCTGGGGAGGGCGGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig3179:4488..15373+

>mRNA_H-paniculata_contig3179.8562.1 ID=mRNA_H-paniculata_contig3179.8562.1|Name=mRNA_H-paniculata_contig3179.8562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2064bp|location=Sequence derived from alignment at H-paniculata_contig3179:4488..15373+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGACTGCAAGGTAGATTTCTATGTGATCGGTTCCCAGGGAGGCGA
GCCAGTGGCGACAATGTGTCGTACAGTGTTCACCATCGTCACCATCAGCT
TGATATCTTCTTGGTGCATCCAATCGTCCAAAGTCAAGAAACTGCTGCTT
TTCTTCTCTCACTGGTTGAGATGTCGGACTGCAAGGTAGATTTCTATGTG
ATCGGTTCCCAGGGAGGCGAGCCAGTGGCGACAATGTGTCGTACAGTGTT
CACCATCGTCACCATCAGCTTGATATCTTCTTGGTGCATCCAATCGTCCA
AAGTCAAGAAACTGCTGCTTTTCTTCTCTCACTGGTTGAGCGGGCTCATC
CATGAGCTGGCCGACTTGATCATGAACACGATGGTGTCGGTTTGCTGGTC
AAGATCAGAGGCGTTCTTCACGATCAAAACGTTTAAGTTCCTGGAGTTGG
CATCTACGAACATGCTGGCGGTGACAAATCTGGCCATCTGCGTAAATCTC
GCCCTCATCGTCTCGCGGGCTCATCCATGAGCTGGCCGACTTGATCATGA
ACACGATGGTGTCGGTTTGCTGGTCAAGATCAGAGGCGTTCTTCACGATC
AAAACGTTTAAGTTCCTGGAGTTGGCATCTACGAACATGCTGGCGGTGAC
AAATCTGGCCATCTGCGTAAATCTCGCCCTCATCGTCTCGAGTCATCGAA
CGATGACCCGAGTTCAAAGCTTGAGCTCGCCGAAGATCATTCTCGGCTTC
CTCGTGGTGTCCATCGCGCTCACGGCGATATCCGCAGCCTTCTGGGAGGA
CATGGCCGTCAGCCAAACCTTGTACTGGGCACGGAGCCACAATCAGAGTC
ATCGAACGATGACCCGAGTTCAAAGCTTGAGCTCGCCGAAGATCATTCTC
GGCTTCCTCGTGGTGTCCATCGCGCTCACGGCGATATCCGCAGCCTTCTG
GGAGGACATGGCCGTCAGCCAAACCTTGTACTGGGCACGGAGCCACAATC
AGGCGCAAATGGATTGGATCATGATCTCTTTATTTTTGGTCGAGTTTGTC
GTGGGCGTGCTAATGCTGCTTGTAGTCGGTATGCTGCTGCTGTTTAGACT
GCCGGAAGTACGAGAGTGCTGGAAGTTGCACCGCCGCATCCGCTATTACT
TCGGGCTTACTGGCATCGCAATCGTGGTCAACTTGGCTGTCGGCTTCGGG
GGAATGGTGGTGGTATTGCTGGGTTGGAAAGACTGGCGCAAATGGATTGG
ATCATGATCTCTTTATTTTTGGTCGAGTTTGTCGTGGGCGTGCTAATGCT
GCTTGTAGTCGGTATGCTGCTGCTGTTTAGACTGCCGGAAGTACGAGAGT
GCTGGAAGTTGCACCGCCGCATCCGCTATTACTTCGGGCTTACTGGCATC
GCAATCGTGGTCAACTTGGCTGTCGGCTTCGGGGGAATGGTGGTGGTATT
GCTGGGTTGGAAAGACTGGGGGGTGCTCATATCCGTCAGCTGGGGAATGA
GACACATGCACATCGCTCTCGACACTTTGGTGCTCTACGGCGTACTGGGT
GGCTCCTCGAGAGGGGGGTGCTCATATCCGTCAGCTGGGGAATGAGACAC
ATGCACATCGCTCTCGACACTTTGGTGCTCTACGGCGTACTGGGTGGCTC
CTCGAGAGACATGGACGAGCGTGGGGGGGCGCGCTCAGAGCATTCGGAGA
TGGCCGATGTTTCCAGGAAGCAAGACAACAAACCGGCCGGCGGCAAACAC
ATGAAATGGAAAGTGACGCATGGGGAAACGAGCAGCTCTGCCTCGGCCGG
GGACTGTCCCACCCCCACCTCTTCCTCTATACAGGCGGCACCCATGTGCG
CAAGCGTCTAAACATGGACGAGCGTGGGGGGGCGCGCTCAGAGCATTCGG
AGATGGCCGATGTTTCCAGGAAGCAAGACAACAAACCGGCCGGCGGCAAA
CACATGAAATGGAAAGTGACGCATGGGGAAACGAGCAGCTCTGCCTCGGC
CGGGGACTGTCCCACCCCCACCTCTTCCTCTATACAGGCGGCACCCATGT
GCGCAAGCGTCTAA
back to top