mRNA_H-paniculata_contig31663.8536.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig31663.8536.1
Unique NamemRNA_H-paniculata_contig31663.8536.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: D8LPS9_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPS9_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 7.360e-33
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 2
Query:  116 EPARSGREKQRYDGETRLVAGCLPVMPDGRVLLIGSVKSTDWILPKGGWEHDETSAEAAVREAYEEAGVR 325
            EPAR GREK RYDG+TRLVAGCLPV PDGR++LIGSVK TDWILPKGGW+ DET+AEAAVREAYEEAGV+
Sbjct:    2 EPARQGREKCRYDGDTRLVAGCLPVTPDGRLVLIGSVKHTDWILPKGGWDTDETAAEAAVREAYEEAGVK 71          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: A0A6H5KB35_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB35_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.500e-32
Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 2
Query:  116 EPARSGREKQRYDGETRLVAGCLPVMPDGRVLLIGSVKSTDWILPKGGWEHDETSAEAAVREAYEEAGVR 325
            EPAR GREK RYDG+TRLVAGCLPV PDGR++LIGS+K TDWILPKGGW+ DET+AEAAVREAYEEAGV+
Sbjct:    2 EPARQGREKCRYDGDTRLVAGCLPVTPDGRLVLIGSLKRTDWILPKGGWDTDETAAEAAVREAYEEAGVK 71          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: D8M9H8_BLAHO (Nudix hydrolase domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M9H8_BLAHO)

HSP 1 Score: 92.0 bits (227), Expect = 1.450e-19
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  122 ARSGREKQRYDGETRLVAGCLPVMPDGRVLLIGSVKSTD-WILPKGGWEHDETSAEAAVREAYEEAGVRKEEGGTYNIWCNISLCADERFIPFSSRFIFAAWLMLPLLVCRCIEEQ*TWPLQQRVNLVILRRQD 520
            AR GREKQRYDGETRLV GC+    D + LLI S K  D W+ PKGGWE DET +EAA+RE +EEAG+     GT+    +  +  ++   P   R          L   +C +E   WP +   +   +R++D
Sbjct:    9 AREGREKQRYDGETRLVVGCVVYSGD-KFLLISSHKRKDKWVFPKGGWESDETESEAAIRECFEEAGIE----GTFGDCISTIVYPNKLGKPVQWR----------LFTMKCTKEYDWWPEKDHRDRKWVRKED 127          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: A0A4D9CRC2_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRC2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 5.210e-18
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 2
Query:  125 RSGREKQRYDGETRLVAGCLPVMPDGRVLLIGSVKSTDWILPKGGWEHDETSAEAAVREAYEEAGV 322
            R GR+ QRY+G  RL+ GC+P+  DG V+LI S ++ DWILPKGGWE DET+ EAA RE YEE GV
Sbjct:   12 RMGRQLQRYNGNVRLITGCIPLTSDGNVVLISS-RTGDWILPKGGWERDETAREAAARETYEEGGV 76          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: A0A8H4AP94_GIGMA (Polyphosphatase DDP1 n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AP94_GIGMA)

HSP 1 Score: 86.3 bits (212), Expect = 2.020e-17
Identity = 42/79 (53.16%), Postives = 52/79 (65.82%), Query Frame = 2
Query:  122 ARSGREKQRYDGETRLVAGCLPVMPD-GRVLLIGSVKSTDWILPKGGWEHDETSAEAAVREAYEEAGVRKEEGGTYNIW 355
            AR+GREKQ Y+G  R V GC+P+  + G +LLI   +   W+LPKGGWE+DET  EAA RE YEEAG R +      IW
Sbjct:    4 ARTGREKQVYEGLIRQVVGCVPINKETGEILLITRRRKGGWVLPKGGWENDETQQEAAARETYEEAGARGKLSSFIGIW 82          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: A0A7S1U8G6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8G6_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.570e-17
Identity = 48/77 (62.34%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  119 PARSGREKQRYDGETRLVAGCLPVMPDGRVLLIGSVKSTDWILPKGGWEHDETSAEAAVREAYEEAGVRKEEGGTYN 349
            PAR GREKQR++  TRL AG +PV+  G V+LI S K  +WILPKGGWE DET   AA RE YEEAGVR    GT N
Sbjct:   93 PARRGREKQRFECSTRLCAGVVPVLK-GNVVLIKSQKRKEWILPKGGWESDETIEAAAARECYEEAGVR----GTVN 164          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: A0A433DIK9_9FUNG (NUDIX hydrolase domain-like protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DIK9_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 1.280e-16
Identity = 46/81 (56.79%), Postives = 53/81 (65.43%), Query Frame = 2
Query:  122 ARSGREKQRYDGET-RLVAGCLPVMPD-GRVLLIGSVK-STDWILPKGGWEHDETSAEAAVREAYEEAGVRKEEGGTYNIW 355
            AR+GREKQ YD    R VAGC+P+ P  G++LLI   K    WILPKGGWE DET  EAA+RE YEEAG+R    G    W
Sbjct:    3 ARTGREKQVYDSNNVRQVAGCVPINPQTGQILLISRTKRENQWILPKGGWESDETKEEAAMRETYEEAGLRGRITGFLGTW 83          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: UPI00071225A6 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071225A6)

HSP 1 Score: 83.2 bits (204), Expect = 3.580e-16
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 2
Query:  122 ARSGREKQRYDGETRLVAGCLPVMPDGRVLLIGSVKSTDWILPKGGWEHDETSAEAAVREAYEEAGV 322
            AR GREKQ+YDGETRLV GC+ +     +L+        W+LPKGGWE DET+ EAA RE +EEAGV
Sbjct:    9 ARKGREKQKYDGETRLVIGCVAIRDHSFLLVSSHNTKGKWVLPKGGWEVDETAEEAAKRETFEEAGV 75          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: A0A086TKI5_9FUNG (Nudix hydrolase domain-containing protein n=1 Tax=Podila verticillata NRRL 6337 TaxID=1069443 RepID=A0A086TKI5_9FUNG)

HSP 1 Score: 82.4 bits (202), Expect = 6.020e-16
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  110 MAEPARSGREKQRYDGETRLVAGCLPVMPDGR-VLLIGSVKST-DWILPKGGWEHDETSAEAAVREAYEEAGV 322
            M   AR GR  Q YD  +RLVAGC+P+   GR VLL+ S K   +W+LPKGGWE+DET  EAA+RE +EEAG 
Sbjct:    1 MQSTAREGRHNQLYDHGSRLVAGCVPIDRQGRRVLLVASSKHDGEWVLPKGGWENDETQEEAALRETWEEAGA 73          
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Match: A0A433PWZ4_9FUNG (NUDIX hydrolase domain-like protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PWZ4_9FUNG)

HSP 1 Score: 83.2 bits (204), Expect = 8.170e-16
Identity = 46/73 (63.01%), Postives = 52/73 (71.23%), Query Frame = 2
Query:  116 EPARSGREKQRYDGET-RLVAGCLPV-MPDGRVLLIGSVKSTD-WILPKGGWEHDETSAEAAVREAYEEAGVR 325
            E AR+GREKQ YD    R VAGC+PV    G++LL+ S K  D WILPKGGWE DET  EAA RE YEEAG+R
Sbjct:    2 EEARTGREKQVYDERNIRQVAGCVPVNSKTGQILLVSSRKHDDQWILPKGGWEIDETKEEAAARETYEEAGLR 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31663.8536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPS9_ECTSI7.360e-3384.29Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A6H5KB35_9PHAE1.500e-3282.86Nudix hydrolase domain-containing protein n=1 Tax=... [more]
D8M9H8_BLAHO1.450e-1941.04Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A4D9CRC2_9STRA5.210e-1862.12Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A8H4AP94_GIGMA2.020e-1753.16Polyphosphatase DDP1 n=1 Tax=Gigaspora margarita T... [more]
A0A7S1U8G6_9STRA2.570e-1762.34Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A433DIK9_9FUNG1.280e-1656.79NUDIX hydrolase domain-like protein n=1 Tax=Jimger... [more]
UPI00071225A63.580e-1658.21hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A086TKI5_9FUNG6.020e-1657.53Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A433PWZ4_9FUNG8.170e-1663.01NUDIX hydrolase domain-like protein n=1 Tax=Endogo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31663contigH-paniculata_contig31663:192..980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.7
Seed ortholog evalue7.2e-27
Seed eggNOG ortholog2880.D8LPS9
Preferred nameDDP1
KEGG koko:K07766
Hectar predicted targeting categoryother localisation
GOsGO:0000298,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004551,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005975,GO:0006066,GO:0006082,GO:0006139,GO:0006163,GO:0006195,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006797,GO:0006798,GO:0006807,GO:0008150,GO:0008152,GO:0008486,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009166,GO:0009167,GO:0009169,GO:0009259,GO:0009261,GO:0009987,GO:0015959,GO:0015961,GO:0016070,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016891,GO:0016893,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019751,GO:0034404,GO:0034431,GO:0034432,GO:0034641,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043647,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046434,GO:0046483,GO:0046700,GO:0046838,GO:0046855,GO:0050072,GO:0055086,GO:0071543,GO:0071545,GO:0071704,GO:0072521,GO:0072523,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901906,GO:1901907,GO:1901908,GO:1901909,GO:1901910,GO:1901911,GO:1990174
EggNOG free text desc.diphosphoinositol-polyphosphate diphosphatase activity
EggNOG OGsCOG0494@1,KOG2839@2759
EC3.6.1.52
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size789
Cds size360
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31663.8536.1prot_H-paniculata_contig31663.8536.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig31663 301..660 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929976.0050437-UTR-H-paniculata_contig31663:191..3001622929976.0050437-UTR-H-paniculata_contig31663:191..300Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31663 192..300 +
1691481094.385621-UTR-H-paniculata_contig31663:191..3001691481094.385621-UTR-H-paniculata_contig31663:191..300Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31663 192..300 +
1622929976.0392635-UTR-H-paniculata_contig31663:660..9801622929976.0392635-UTR-H-paniculata_contig31663:660..980Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31663 661..980 +
1691481094.409452-UTR-H-paniculata_contig31663:660..9801691481094.409452-UTR-H-paniculata_contig31663:660..980Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31663 661..980 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929976.0222797-CDS-H-paniculata_contig31663:300..6601622929976.0222797-CDS-H-paniculata_contig31663:300..660Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31663 301..660 +
1691481094.3996344-CDS-H-paniculata_contig31663:300..6601691481094.3996344-CDS-H-paniculata_contig31663:300..660Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31663 301..660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig31663.8536.1

>prot_H-paniculata_contig31663.8536.1 ID=prot_H-paniculata_contig31663.8536.1|Name=mRNA_H-paniculata_contig31663.8536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
MAEPARSGREKQRYDGETRLVAGCLPVMPDGRVLLIGSVKSTDWILPKGG
WEHDETSAEAAVREAYEEAGVRKEEGGTYNIWCNISLCADERFIPFSSRF
IFAAWLMLPLLVCRCIEEQ*
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mRNA from alignment at H-paniculata_contig31663:192..980+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig31663.8536.1 ID=mRNA_H-paniculata_contig31663.8536.1|Name=mRNA_H-paniculata_contig31663.8536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=789bp|location=Sequence derived from alignment at H-paniculata_contig31663:192..980+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAACTAGTCTTGACGATAGTTCTTCAGTTGCATATATTCGCCCCGCATA ACAAGTGCACGTACAGTGAAAGAACAGAACAGCAATTCACTTGATTACTA GATTGTAGTATGGCCGAGCCCGCTCGTAGCGGCAGGGAAAAGCAGCGGTA CGATGGAGAGACTCGCCTCGTGGCGGGTTGCCTACCGGTCATGCCGGACG GGCGCGTCTTGCTGATCGGCAGCGTTAAGAGCACAGACTGGATCCTCCCC AAGGGTGGGTGGGAGCATGACGAGACGAGCGCTGAAGCTGCGGTGCGCGA GGCCTACGAAGAGGCGGGGGTGAGAAAGGAGGAGGGAGGTACATACAATA TATGGTGCAATATATCATTGTGTGCAGATGAAAGATTCATCCCGTTTTCA AGTAGATTCATTTTTGCTGCTTGGTTGATGCTCCCATTGCTGGTTTGTCG TTGTATCGAGGAACAGTAGACCTGGCCTCTCCAACAGCGGGTAAATTTGG TTATACTACGCAGACAGGACAGACAGTACAGTAGTAGTATATACACATGA GTTGTAGTGATAAGGGTTTGTTCTGGTTTTGCTAGAGAGGCGGTCTGTTT TTCAGCAGACAAGGACACATCTTATCTTATCAGGTGGGGAAAACTGTTGT GTGTGCCGGAGCATGTTCCACGGCGGGACTTTTATCCTGCTCTCTATTTA AGCATGTAGAGCGGCTTTGGTCTGCAGTTTTGCAGACACGTTTTTGCTGC ACGTGTTCAGATTTTATAATTATGGAATAAAGAACTGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig31663:192..980+

>mRNA_H-paniculata_contig31663.8536.1 ID=mRNA_H-paniculata_contig31663.8536.1|Name=mRNA_H-paniculata_contig31663.8536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at H-paniculata_contig31663:192..980+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGAGCCCGCTCGTAGCGGCAGGGAAAAGCAGCGGTACGATGGAGA
GACTCGCCTCGTGGCGGGTTGCCTACCGGTCATGCCGGACGGGCGCGTCT
TGCTGATCGGCAGCGTTAAGAGCACAGACTGGATCCTCCCCAAGGGTGGG
TGGGAGCATGACGAGACGAGCGCTGAAGCTGCGGTGCGCGAGGCCTACGA
AGAGGCGGGGGTGAGAAAGGAGGAGGGAGGTACATACAATATATGGTGCA
ATATATCATTGTGTGCAGATGAAAGATTCATCCCGTTTTCAAGTAGATTC
ATTTTTGCTGCTTGGTTGATGCTCCCATTGCTGGTTTGTCGTTGTATCGA
GGAACAGTAGATGGCCGAGCCCGCTCGTAGCGGCAGGGAAAAGCAGCGGT
ACGATGGAGAGACTCGCCTCGTGGCGGGTTGCCTACCGGTCATGCCGGAC
GGGCGCGTCTTGCTGATCGGCAGCGTTAAGAGCACAGACTGGATCCTCCC
CAAGGGTGGGTGGGAGCATGACGAGACGAGCGCTGAAGCTGCGGTGCGCG
AGGCCTACGAAGAGGCGGGGGTGAGAAAGGAGGAGGGAGGTACATACAAT
ATATGGTGCAATATATCATTGTGTGCAGATGAAAGATTCATCCCGTTTTC
AAGTAGATTCATTTTTGCTGCTTGGTTGATGCTCCCATTGCTGGTTTGTC
GTTGTATCGAGGAACAGTAG
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