prot_H-paniculata_contig1132.848.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1132.848.1
Unique Nameprot_H-paniculata_contig1132.848.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length902
Homology
BLAST of mRNA_H-paniculata_contig1132.848.1 vs. uniprot
Match: D8LJE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE2_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 2.290e-115
Identity = 312/785 (39.75%), Postives = 393/785 (50.06%), Query Frame = 0
Query:  181 SGHESQVQCMAIDNRGSLLVTGDESGAIFARILHHRNSKSAHQPPQRDRDGTQFGGGRSSSGNTGDGNA-------TAVASAAAHEGGVLAVSHVDDRPSRISGNEDSDSEPKDEEMLFVSGGQGGIVRLWRATYGLAGH----AGQTGSVMRLRLRVLMDMHIGGCQVSSLATCPSYRAPLVVVGCNEGIVFGFAL-----------------EPLVDAPA-------SDGPFTSAG-----------EMGRLLTKLEHTSRRITSVTCSREQELIATADTDGIVRTYRPLSLRGANCSDSVHDVDSVSVVDGLPPWQLELIVECRLGSSPVACEFAMEKENALASKEAKDKGGGIEREVLRTCTRDGVRVRVWPGADLPTRPLRPLPXXXXSSPXXXXXXNPTEHTPVRMPTHDR---PTQTRYMAGSNNMGQPPRSFGAEDRFHXXXXXXXX--------RQSVDPKEAFVGEEGVEGDATGLGRTGNVDEGEE-EEEEPVPRASLPVPGLGPTTPRRVSFASAEQVCYSVDS--GNRKEDDESESSFAMYSNGTQEKGDCNNVLEEEKXXXXXXXXXXXXPQSSGPSYPGR-LRQHWGTNLVRREG-RLPADAATGGQEGA-FVPPSDLQEPSLLSTMMEQAALERRMEEEFDSRATLERLNQPAYRGPAASVVNIHPLAKTFEGLVPVSLDAPPPRPKRMGKQVSRAHLSRVEEGRITEQDLLFDGVEPAVCSIAPEIGIDTSRTVWP--QVEWYGGRPAYSQKEDASFVSDRIWSWSLR 900
            +G   +V C++ID RG LLVTGDESGAI AR+LHH  ++S         DGT  G    SS   G            A     AH G VLA+SHV+       G  D      D+  LFVSGG+GG+VRLW+A           AG  G  + + + +L DM +GG QVS LA   S   P+V+ G  EG VF F L                  P V  P        S G   ++G           E+G +L K EHTS  +  V CS+EQELIA  D  GIVRTYRPL  RG +  ++  D    +        + EL+VECRLG+ PV+CEF        +  + + +G G E EVLRTCT  GV +R+WP A LPTRP+RP                P    P R+P +     P      AG++                XXXXXXXX        +++ DP + F     ++    G G  G V  GE  EEEEP  R   P+P   P  PRRVSFA A+QV    D   G+                             +E     XXXX     ++SG + P R LRQ WGT+     G R    ++T   + A FV PS +QEPSL ST  EQA LERRM EEFD     E +  P YR  AA+ VNIHPLAKTFEGLVPVSLDAPPPRPKR GKQVS++HLS+V+E RITE+DL FDG+EP  CS     G  T+  +WP  ++EWYGGR  +++ + +S  SDR+WS   R
Sbjct:   11 TGRRQKVGCLSIDRRGELLVTGDESGAICARLLHHSGNRSG--------DGTACG----SSSVEGXXXXXXXXXXXVAEVVREAHSGEVLAISHVE------GGAGD------DDPALFVSGGKGGVVRLWKAACLERSRETVAAGGGGGDLEVHVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPSDRRDREAEDDRPTVGRPTVGYGDRGSRGGSVASGRERPDNAVGRTELGAVLMKFEHTSEPVERVCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPSDGAPPTAAAAAEARRFELVVECRLGARPVSCEFGSGPRGVESGGDRR-RGVGGEGEVLRTCTARGV-LRLWPTASLPTRPMRP----------------PPSSAPTRLPDYHEALAPLPHPSNAGTDXXXXXXXXXXXXXXXXXXXXXXXXXAMAAGTEQENRDPSDPFSRWTAIDAKGRGPGLVG-VGGGEGGEEEEPSARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELGAPRXXXXAPTPMRASGATGPPRRLRQTWGTSASSPRGSRARRGSSTDASDDASFVAPSRMQEPSLWSTAAEQAELERRMTEEFDGSGVPEPV-APVYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPKRKGKQVSKSHLSKVQEQRITEEDLAFDGMEPD-CSAIIGFGSSTAGRMWPHEELEWYGGRKMFAELDRSSTASDRVWSLGRR 750          
BLAST of mRNA_H-paniculata_contig1132.848.1 vs. uniprot
Match: A0A6H5L2I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I0_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 8.410e-108
Identity = 311/768 (40.49%), Postives = 385/768 (50.13%), Query Frame = 0
Query:  187 VQCMAIDNRGSLLVTGDESGAIFARILHHRNSKSAHQPPQRDRDGTQFGGGRSSSGNTGDGNATAVASAA--AHEGGVLAVSHVDDRPSRISGNEDSDSEPKDEEMLFVSGGQGGIVRLWRATY----GLAGHAGQTGSVMRLRLRVLMDMHIGGCQVSSLATCPSYRAPLVVVGCNEGIVFGFAL------------EPLVDAPA----------------SDGPFTSAG--EMGRLLTKLEHTSRRITSVTCSREQELIATADTDGIVRTYRPLSLRGANCSDSVHDVDSVSVVDGLPPWQLELIVECRLGSSPVACEFAMEKENALASKEAKDKGGGIEREVLRTCTRDGVRVRVWPGADLPTRPLRPLPXXXXSSPXXXXXXNPTEHTPVRMPT-HDR--PTQTRYMAGSNNMGQPPRSFGAEDRFHXXXXXXXX---RQSVDPKEAFVGEEGVEGDATGLGRTGNVDEGEEEEE-EPVPRASLPVPGLGPTTPRRVSFASAEQVCYSVD----SGNRKEDDESESSFAMYSNGTQEKGDCNNVLEEEKXXXXXXXXXXXXPQSSGPS-YPGRLRQHWGTNLVR-REGRLPADAATGGQEGAFVPPSDLQEPSLLSTMMEQAALERRMEE---EFDSRATLERLNQPAYRGPAASVVNIHPLAKTFEGLVPVSLDAPPPRPKRMGKQVSRAHLSRVEEGRITEQDLLFDGVEPAVCSIAPEIGIDTSRTVWP--QVEWYGGRPAYSQKEDASFVSDRIWSWSLR 900
            V C++ID RG LLVTGDESGAI AR+LHH  ++S         DGT +G      G +       VA     AH G VLA+SHV+       G  D      D+  LFVSGG+GG+VRLW+A           AG +G  + +++ +L DM +GG QVS LA   S   P+V+ G  EG VF F L            E   D PA                 + P  + G  E+G +L K EHTS  I  V CS+EQELIA  D  GIVRTYRPL  R  +  ++  D    +        + EL+VECRLG+ PV                    GG  E EVLRTCT  G+ +R+W  A LPTRP+RP                P    P R+P  H+   P      AG+++               XXXXXXX    +++ DP + F     ++   +G G  G V  GE  EE E   R   P+P   P  PRRVSFA A+QV    D    SGN                                XXXXXXXXXXXX ++SG +  PGRLRQ WGT+    R  R     +    + AFV PS +QEPSL ST  EQ  LERRM E   EFD  A  E    P YR  AA+ VNIHPLAKTFEGLVPVSLDAPPPRP R GKQVS+ HLS+V+E RITE+DL FDG+EP  CS+    G  T   +WP  ++EWYGGR   ++ + +S  SDR+WS   R
Sbjct:    5 VGCLSIDRRGELLVTGDESGAICARLLHHSGNRSG--------DGTAYGSSSFEGGPSXXXXXXXVAEVLREAHSGEVLAISHVE------GGAGD------DDPALFVSGGKGGVVRLWKAACLERSRETAAAGGSGGDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPSDRRDGEAEDDRPAVGYGDRGGRGGSAASGREPPDDAVGRTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPRRVSTDNNPGDGAPPTTAAAAEARRFELVVECRLGARPVXXXXXXXXXXXXXXXXXXXVGG--EGEVLRTCTARGI-LRLWLTASLPTRPMRP----------------PXXSAPTRLPDDHEALAPLPHTSNAGTDSSXXXXXXXXXXXXXXXXXXXXXVGAEQENRDPSDPFSRSTAIDATGSGSGVVG-VGGGERGEEVELTARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSGNNXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRASGANGTPGRLRQTWGTSTSSPRSNRARRGCSMDASDDAFVAPSRMQEPSLWSTAAEQVELERRMTEATHEFDGGAVPEPA-APTYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMRKGKQVSKRHLSKVQEQRITEEDLAFDGMEPD-CSVIMGFGSSTVGRMWPYEELEWYGGRKMSAELDHSSTASDRVWSLGRR 723          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1132.848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJE2_ECTSI2.290e-11539.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2I0_9PHAE8.410e-10840.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 248..305
e-value: 0.61
score: 18.3
coord: 10..49
e-value: 0.3
score: 20.1
coord: 173..214
e-value: 1.5
score: 15.8
coord: 385..424
e-value: 0.13
score: 21.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 13..424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1132contigH-paniculata_contig1132:5906..14731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1132.848.1mRNA_H-paniculata_contig1132.848.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1132 5897..14985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1132.848.1 ID=prot_H-paniculata_contig1132.848.1|Name=mRNA_H-paniculata_contig1132.848.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=902bp
MEETGLRLCPEDPIKVYTDTMEVTACCWHPSNPDTIGVCSNDGSFVLVPN
ITTRAEESVPTASRAYAVYFNTLPVHLWGRAQRGGSGAIGQDSRDSRALQ
APARRVRHAWSQVALVPGQEGEVIFVQGWSPRVLLTTLPKVCASVFAVCL
VLKGSEGSARTIDPDSSSRGFLNGSRVIALSGHESQVQCMAIDNRGSLLV
TGDESGAIFARILHHRNSKSAHQPPQRDRDGTQFGGGRSSSGNTGDGNAT
AVASAAAHEGGVLAVSHVDDRPSRISGNEDSDSEPKDEEMLFVSGGQGGI
VRLWRATYGLAGHAGQTGSVMRLRLRVLMDMHIGGCQVSSLATCPSYRAP
LVVVGCNEGIVFGFALEPLVDAPASDGPFTSAGEMGRLLTKLEHTSRRIT
SVTCSREQELIATADTDGIVRTYRPLSLRGANCSDSVHDVDSVSVVDGLP
PWQLELIVECRLGSSPVACEFAMEKENALASKEAKDKGGGIEREVLRTCT
RDGVRVRVWPGADLPTRPLRPLPLQPLSSPPPPPQPNPTEHTPVRMPTHD
RPTQTRYMAGSNNMGQPPRSFGAEDRFHHHQQQQQQRQSVDPKEAFVGEE
GVEGDATGLGRTGNVDEGEEEEEEPVPRASLPVPGLGPTTPRRVSFASAE
QVCYSVDSGNRKEDDESESSFAMYSNGTQEKGDCNNVLEEEKEEQPRPPP
PAPTPQSSGPSYPGRLRQHWGTNLVRREGRLPADAATGGQEGAFVPPSDL
QEPSLLSTMMEQAALERRMEEEFDSRATLERLNQPAYRGPAASVVNIHPL
AKTFEGLVPVSLDAPPPRPKRMGKQVSRAHLSRVEEGRITEQDLLFDGVE
PAVCSIAPEIGIDTSRTVWPQVEWYGGRPAYSQKEDASFVSDRIWSWSLR
P*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR036322WD40_repeat_dom_sf