mRNA_H-paniculata_contig3136.8466.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: D7G7T4_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T4_ECTSI) HSP 1 Score: 646 bits (1667), Expect = 8.510e-206 Identity = 409/566 (72.26%), Postives = 449/566 (79.33%), Query Frame = 2
Query: 2015 GKNKKKAVSAPVKQYETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKKGARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGGARDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAALLTHEDEVCAEYEKRKADKEKAAAAAKTNGASHENGKGSKHADDXXXXDKMSKDGSKRGRSRSGDRTTRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------RKKGGGKTT-VEEEKPPKRGFQEILDKRAVNLGIIFDALVEKAVVKRKEEDRQRERREKKLRGLLEDYFYRSDHVDVKWEHGKEKIGKHSLVKEMDEEDCKRMFDEHMAMLSEKMAKKAARQEQMR 3661
GK K AV+ +Y TEEEKKEAFVEMLKECEVTSTTKWPET RYCQSDPRWELL+KG+RRQ WTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAER+LRDDARFKAVPD++DREDLFNEFV ALTKKE EDRRAAQK A+ERF ++LE+E+LSLG+TFR+ WRD RD IERKAPA+TDVLE+ DRR+L+D++V KL KAED+RKARE LRREDFKEFLQGMVEENAITADTTWKDLKRSIEEE+AYKAMD QPGGARDVFDDIVADLRRQFRDDKRCVE LM EAK+VVTPE+KQLEFEAALL HED+ CAEYE+ K+KAA A XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX R +G K ++ PPKR FQEILDKRAVNLGI+F+ALVEKA VKRKEE+ RREKK LLEDYFYRSDHVD+ WE G++KIGKHS+VKEM+E+DCKRMFDEHM+ML EKMAKKAARQEQMR
Sbjct: 356 GKKGKPAVAKV--EYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDNDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEEAYKAMDDQPGGARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDDKCAEYEQ----KQKAAKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRDRRDRGDKKKDKAADDPPPKRVFQEILDKRAVNLGIVFEALVEKAQVKRKEEEXXXXRREKKFGDLLEDYFYRSDHVDIDWEQGRDKIGKHSVVKEMEEDDCKRMFDEHMSMLKEKMAKKAARQEQMR 915
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: A0A835ZHL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHL9_9STRA) HSP 1 Score: 280 bits (716), Expect = 5.780e-74 Identity = 347/972 (35.70%), Postives = 460/972 (47.33%), Query Frame = 2
Query: 944 PQMAGMP----PMLYQQQYGRPPMVVXXXXXXXXXVPAAHGWTEHKAPDGRPYFYNSVTRVSSYERPPELKSPQEKAAATAVPAPKATPTPVVITAAXXXXXXXXXXXXXXXXXXXXHPASAATPTPAXXXTASXXXXXXXXXXXXXXXTVPTVPXXXXAVAVPVPVVPKP------------VAPAAPVV------IPKCKWKAYDGPSGRKYYSDGKFSLWEKPKELKDYEAAVAAXXXXXXXXXXXXXXXXXXXXTATGDT-----AAGASAMXXXXXXXXXXXXXXXXXXGQASETNGERRREPQAEVELVGFGGANGVALKIVKDSPPASPAATAXXXXSTXXXXXXXXXXXXXXXXXXXXDEKKLSPKPTQANGSSGTGKNKKKAVSAPVKQYETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKKGARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLS-LGLTFRSVWRDVRDAIERKAPADT--DVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKR--------------------------SIEEEDAYKAMDGQ-PGGARDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAALLTHEDE-VCAEYEKRKA------DKEKAAAAAKTNGASHENGKGSKHADDXXXXDKMSKDGSKRGRSRSGDRTTRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKGGGKTTVEEEKPPKRGFQEILDKRAVNLGIIFDALVEKAVVKRKEEDRQRERREKKLRGLLEDYFYRSDHVDVKWEHGKEKIGKHSL--VKEMDEEDCKRMFDEHMAMLSEKMAKKAARQEQMR 3661
P GMP PML G P P W+EHKAPDGR Y+YN VT+VS+Y+RP L P K XXXXXXXXXXXXXXXXXXXX PA A PA T S + P A A P P APA +V +P CKWK YD +G+KYYSDGK SLWEKP E+K +EAA A XXXXXXXXXXXXXX AA +A XXXXXXXXXXXXXXXXX Q + +A + + +PT + + +Y+T ++KKEAF+ +L + EVTS TKW + + C DPRW +LKKG RRQ TEYQN RRKEEA+E+R++AKKA+ F+KMLA N IDG +RW EA+ L D RF+ V D RE++F EF L K++ E+ +K A +A+ + + + L +T + W +V A+ A D V+ ET++R + E V KL+ E+E++ R XXXXXX R+ F+ FL+ ++ ITADT WKDL+ IE E Y+AM+ Q P RDVFD IV +LRRQFRDD+R +E+L EAK+ VTPE+ Q +F L+ E + +C ++ + KA +K +A AAK A ENG +++ D+ + G + V P R QE+ KR VN+ + F AL+E+A+V RKE++R+R R EK R LL + FYRSDHV WE + K+ K V E+ E+ + +F+EHM L E MA++A RQE+++
Sbjct: 65 PPQLGMPLQAPPMLQHHHLGLP------VPPAMQPAPVTCDWSEHKAPDGRSYYYNKVTKVSTYDRPAALGPP--KTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPALTAX-XPAGGGTPSKAVSPAVTAVTAGGTPLTATPLGAAA-ASPAPXXXXXXXXXXXXXXXXAAAPAVELVLQKVPVVPPCKWKEYDH-NGKKYYSDGKTSLWEKPAEMKAHEAAKAEAKRIEEXXXXXXXXXXXXXXXXXXXXXXXXXAANVAAXXXXXXXXXXXXXXXXXXERQXXXXXXXXXXQAKA-----------------------------------------------------------RKARRPTVID----------------IAEYKTFKQKKEAFMSLLADEEVTSGTKWADIEKACAEDPRWLVLKKGERRQTATEYQNMRRKEEAKEERARAKKAKDAFLKMLATNFSIDGNTRWTEAKDLLASDIRFQNVQDDRIREEIFMEFTEELRKRDREEESKRRKQALAAYAELVAGANQAGLNITHTTKWSEVSMALADMAAPDPLLSVITETEKRGIFQEHVTKLLSEEEEKRVRXXXXXXXEDARNRKAFEAFLRAKLDAGGITADTKWKDLRAXXXXXXXXXXXXXXXXXXXXXXXXXXEIEHEPEYEAMERQGPTSQRDVFDVIVDELRRQFRDDRRLMEDLAREAKFAVTPETTQDQFMDILVATEWKLICDKHPRLKALEEAHREKLQAREAAKAE-AGIENGDAAENGDENG------------------------------------------------------ENGDSEYEVAMRDAPARRMQEMATKRRVNVELTFKALMERAIVARKEQERKRARLEKDFRELLLECFYRSDHVTATWETARTKLQKRGPTGVLELPEDAQQVLFEEHMIKLREAMAERAERQEKLK 895
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: A0A6S9FUY3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FUY3_HETAK) HSP 1 Score: 172 bits (437), Expect = 1.540e-41 Identity = 161/522 (30.84%), Postives = 244/522 (46.74%), Query Frame = 2
Query: 2084 AFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPA-DTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPG---GARDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAALLTHEDEVCAEYEKRKADKEKAAAAAKTNGASHENGKGSKHADDXXXXDKMSKDGSKRGRSRSGDRTTRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKGGGKTTVEEEKPPKRGFQEILDKRAVNLGIIFDALVEKAVVKRKEEDRQRERREKKLRGLLEDYFYRSDHVDVKWEHGKEKIGKHSLVKEMDEEDCKRMFDEHMAMLSEKMAK 3634
AF EML E V STTKW + + C+ D RW L G RRQ EYQ KR +EE EEKR +A++AR GF+KMLA+NT+ID +RW EAE L DARF AV D +DREDLF +FV L KKE E+++AA+K A + ++L + GLT +S ++D+ D ++ KA + D L++ D R L ++ +K+L K E++R XXXXXXXXX + E IT ++ + D + ++ E + Y A+ A+DVF + V +L+ QF+ D+R VE+ + ++ V S+ + L E++ E+K KR + KR ++ +F+ ++++A +R E+ R LLED++YRSDHV +KW + + ++++E+ K +F+EHMA L EKM K
Sbjct: 42 AFKEMLLERGVASTTKWSDAVKACEGDKRWRALGTLGERRQALAEYQTKRLREEKEEKRLRARRARDGFLKMLAENTRIDSTTRWREAEDILGKDARFGAVEDTADREDLFKDFVTELGKKEKEEKKAARKEAKKALEEYLAAD--GTGLTHKSRFKDLYDDLKDKARSRGWDALDKDDMRDLFEDRIKELKKIEEKRAXXXXXXXXXXXXXXXXXXXXXXXXLSGEGKITHESKFADHEEALAENEGYIALKEDKTLKLKAKDVFAEFVDELKDQFKKDRRVVEDAVRDSGLKVQHFSELAAWVRDLEKWEED------------------------------------------------------------------------------------------------------HEKKEDKRPLTRLQAKRPWHVREVFEHMLKRAKEERXXXXXXXXXXEQAFRELLEDFYYRSDHVGLKWSSASRDLDRERAYRDLEEDRRKALFEEHMAGLEEKMPK 459
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: UPI001C4F9E92 (pre-mRNA-processing protein 40A-like isoform X2 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F9E92) HSP 1 Score: 145 bits (367), Expect = 1.760e-31 Identity = 102/315 (32.38%), Postives = 169/315 (53.65%), Query Frame = 2
Query: 2057 YETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGGA--RDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAAL 2992
Y T++E K AF +L+ V S W +T R +D R+ LK G R+Q + EY +R+K+EAEE+R + KKAR F KML ++ ++ +RW +A DD RFKAV A DREDLF ++ L KKE + QK + +LE + S WR V+D +E LE+ DR ++ E ++ L K E+E+K + R++F++ L+G V + +TA T W+D +++ AY A+ G+ +D+F+D+V +L +++ +DK +++ M K ++ +F+A++
Sbjct: 439 YATKQEAKNAFKALLESVNVESDWTWEQTMRVIITDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLVELEKKERVKAQEEQKRNVMEYRQFLESCDF---IKANSQWRKVQDRLEDDERCSR--LEKIDRLEIFQEYIRDLEKEEEEQKKIQKEHQRRAERKNRDEFRKLLEGHVADGTVTAKTHWRDYFIKVKDSPAYTAVSSNTSGSTPKDLFEDVVEELEKKYHEDKSRIKDGMKLGKINISSSWTLEDFKASI 748
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: UPI001CC796F2 (pre-mRNA-processing protein 40A-like isoform X2 n=6 Tax=Proteaceae TaxID=4328 RepID=UPI001CC796F2) HSP 1 Score: 144 bits (364), Expect = 4.270e-31 Identity = 105/315 (33.33%), Postives = 169/315 (53.65%), Query Frame = 2
Query: 2057 YETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGGA--RDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAAL 2992
Y T++E K AF +L+ V S W +T R +D R+ LK G R+Q + EY +R+K+EAEE+R + KKAR F KML ++ ++ +RW + DD RFKAV A DREDLF ++ L KKE + QK F +LE + S WR V+D +E LE+ DR ++ E ++ L K E+E+K + XX R++F++ L+G V + +TA T W+D +++ AY A+ G+ +D+F+D+V +L +Q+ +DK +++ M K + +F+A++
Sbjct: 479 YATKQEAKNAFKAVLESVNVESDWTWEQTMRIIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRIRQKKAREEFTKMLEESEELTSSTRWSKVISMFEDDERFKAVERARDREDLFENYLVELQKKERAKAQEEQKRNIMEFRQFLESCDF---IKANSQWRKVQDRLEDDERCSR--LEKIDRLEIFQEYIRDLEKEEEEQKKIQKXXQRRIERKNRDEFRKLLEGHVADGMLTAKTRWRDYFMKVKDLPAYIAVSSNASGSTPKDLFEDVVEELEKQYHEDKTRIKDGMKLGKINIASSWALEDFKASI 788
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: A0A2G9GF27_9LAMI (Spliceosomal protein FBP11/Splicing factor PRP40 n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GF27_9LAMI) HSP 1 Score: 140 bits (352), Expect = 2.230e-30 Identity = 110/341 (32.26%), Postives = 179/341 (52.49%), Query Frame = 2
Query: 1982 KPTQANGSSG-TGKNKKKAVSAPVKQYETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGG--ARDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAAL 2992
K + +GS G +G KK P+ YE++EE K+AF +L+ V S W + R +D R+ L+ G R+Q + EY K++K+EAEEKR++ KKAR F KML ++ + +RW +A D RF AV A DREDLF++ + L KKE R A + A++LE + S WR V+ +E A LE+ +R ++ E ++ L E+E++ R++F++ ++ V +TA+T W+D +++ AY A+ G A+D+FDD++ DL +Q+ DDK +EE + K ++ +F++AL
Sbjct: 180 KSAETSGSGGISGAEGKKVEQGPLV-YESKEEAKKAFKALLESANVGSDWNWDQAMRVIINDRRYGALRTLGERKQTFNEYVAKKKKQEAEEKRARQKKAREDFKKMLQESKDLTSSARWSKAITMFEKDERFHAVERAKDREDLFDDHLEELKKKE---RAKALEDRKRHKAEYLEFLKSCDFIKANSQWRKVQHRLE--ADERCSRLEKIERLEIFQEYIRDLEMEEEEQRKLRIEEIRKAERKNRDEFRKLMEEHVATGILTANTHWRDYCMKVKDAPAYLAVSSNTSGSSAKDLFDDVIDDLEKQYLDDKEQIEEAIKNEKISLSTTWTLEDFKSAL 514
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: A0A200PSI5_9MAGN (WW domain n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PSI5_9MAGN) HSP 1 Score: 142 bits (357), Expect = 3.310e-30 Identity = 103/324 (31.79%), Postives = 167/324 (51.54%), Query Frame = 2
Query: 2030 KAVSAPVKQYETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGGA--RDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAAL 2992
KAV Y ++E K AF +L+ V S W + R +D R+ LK G R+Q + EY +R+K+EAEE+R K KKAR F KML ++ ++ +RW +A DD RFKAV A DREDLF ++ L KKE + K + +LE + S WR V+D +E LE+ DR ++ E +++L K E+E++ + R++F++ ++G V +TA W+D +++ AY A+ G+ +D+F+D+ +L +QFR+DK +++ M K + +F+AA+
Sbjct: 460 KAVDEETLIYANKQEAKNAFKALLESANVESDWNWDQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRIKQKKAREEFAKMLEESKELTSSTRWSKAVTMFEDDERFKAVERARDREDLFENYLVELQKKEKAKAQEEHKRNIMEYRQFLESCDF---IKPNSQWRKVQDRLEDDERCSR--LEKIDRLEIFQEYIRELEKEEEEQRKIQKEQLRRAERKNRDEFRKLMEGHVAAGILTAKIHWRDYCMKVKDLPAYIAVSSNTSGSTPKDLFEDVAEELEKQFREDKTRIKDAMKLGKITIASTWTFEDFKAAI 778
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: UPI001493CAD7 (pre-mRNA-processing protein 40A isoform X2 n=1 Tax=Setaria viridis TaxID=4556 RepID=UPI001493CAD7) HSP 1 Score: 139 bits (350), Expect = 1.070e-29 Identity = 103/316 (32.59%), Postives = 162/316 (51.27%), Query Frame = 2
Query: 2057 YETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGGA--RDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAALL 2995
Y T+ E K AF +L+ V S W +T R +D R+ LK G R+Q + EY N+R+K EAEEKR K +KAR F+ ML + ++ +RW +A DD RFKAV +REDLF ++ L KKE + + +LE T WR V++ +E LE+ DR + + ++ L K E+E+K + R+ F++ L+ V + +TA T W+D I+E AY A+ G+ +++FDD++ +L +Q+ DDK C++E++ K +T EF+ A+L
Sbjct: 420 YATKTEAKNAFKSLLESVNVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFEDDERFKAVERPREREDLFEGYLVELHKKEKAKAIEEHRRHVAEYKAFLESCDFIKATT---QWRKVQERLEDDERCSR--LEKIDRLNVFQDYIRYLEKEEEEQKRIQKEHVRRQERKNRDGFRKMLEEHVNDGTLTAKTRWRDYCSQIKESQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTCIKEVVKSGKIPMTTSWTLEEFQTAIL 730
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: A0A2T7ERB0_9POAL (Uncharacterized protein n=9 Tax=Panicum TaxID=4539 RepID=A0A2T7ERB0_9POAL) HSP 1 Score: 139 bits (349), Expect = 2.320e-29 Identity = 105/316 (33.23%), Postives = 162/316 (51.27%), Query Frame = 2
Query: 2057 YETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGGA--RDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAALL 2995
Y T+ E K AF +L+ V S W +T R +D R+ LK G R+Q + EY N+R+K EAEEKR K +KAR F+ ML + ++ +RW +A DD RFKAV +REDLF ++ L KKE + + +LE T WR V++ +E LE+ DR + E ++ L K E+E+K + R+ F++ L+ V + ITA T W+D I++ AY A+ G+ +++FDD++ +L +Q+ DDK V+E++ K +T K EF+ A+L
Sbjct: 418 YATKAEAKNAFKSLLESVNVESDWTWDQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFEDDERFKAVERPREREDLFENYLVELHKKEKAKALEEHRRHLAEYKAFLESCDFIKATT---QWRKVQERLEDDERCSR--LEKIDRLNIFQEYIRHLEKEEEEQKRIQKEQVRRQERKNRDAFRKMLEEHVTDGTITAKTRWRDYCSQIKDSQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTRVKEVVKSGKIPMTTSWKLEEFQTAIL 728
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Match: K3ZQD8_SETIT (Uncharacterized protein n=35 Tax=Panicoideae TaxID=147369 RepID=K3ZQD8_SETIT) HSP 1 Score: 138 bits (348), Expect = 3.060e-29 Identity = 103/316 (32.59%), Postives = 162/316 (51.27%), Query Frame = 2
Query: 2057 YETEEEKKEAFVEMLKECEVTSTTKWPETTRYCQSDPRWELLKK-GARRQVWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERSLRDDARFKAVPDASDREDLFNEFVHALTKKENEDRRAAQKAAAERFADWLEDEHLSLGLTFRSVWRDVRDAIERKAPADTDVLEETDRRKLVDEMVKKLVKAEDERKAREXXXXXXXXXLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDGQPGGA--RDVFDDIVADLRRQFRDDKRCVEELMVEAKYVVTPESKQLEFEAALL 2995
Y T+ E K AF +L+ V S W +T R +D R+ LK G R+Q + EY N+R+K EAEEKR K +KAR F+ ML + ++ +RW +A DD RFKAV +REDLF ++ L KKE + + +LE T WR V++ +E LE+ DR + + ++ L K E+E+K + R+ F++ L+ V + +TA T W+D I+E AY A+ G+ +++FDD++ +L +Q+ DDK C++E++ K +T EF+ A+L
Sbjct: 420 YATKTEAKNAFKSLLESVNVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFDDDERFKAVERPREREDLFEGYLVELHKKEKAKAIEEHRRHVAEYKAFLESCDFIKATT---QWRKVQERLEDDERCSR--LEKIDRLNVFQDYIRYLEKEEEEQKRIQKEHVRRQERKNRDGFRKMLEEHVNDGTLTAKTRWRDYCSQIKESQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTCIKEVVKSGKIPMTTSWTLEEFQTAIL 730 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3136.8466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3136.8466.1 >prot_H-paniculata_contig3136.8466.1 ID=prot_H-paniculata_contig3136.8466.1|Name=mRNA_H-paniculata_contig3136.8466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1359bp MAGRGGRGRGMVLPAWVTQGKAQPVAGAPGADKVLQEQRAPGGLQDAALSback to top mRNA from alignment at H-paniculata_contig3136:2504..12943- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3136.8466.1 ID=mRNA_H-paniculata_contig3136.8466.1|Name=mRNA_H-paniculata_contig3136.8466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10440bp|location=Sequence derived from alignment at H-paniculata_contig3136:2504..12943- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3136:2504..12943- >mRNA_H-paniculata_contig3136.8466.1 ID=mRNA_H-paniculata_contig3136.8466.1|Name=mRNA_H-paniculata_contig3136.8466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8154bp|location=Sequence derived from alignment at H-paniculata_contig3136:2504..12943- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |