mRNA_H-paniculata_contig3133.8462.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: D7G359_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G359_ECTSI) HSP 1 Score: 234 bits (598), Expect = 5.420e-68 Identity = 114/163 (69.94%), Postives = 132/163 (80.98%), Query Frame = 1
Query: 43 GVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLSKLPPRYLAGLSTSCQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDAVSAIRGEVALKPRARFCTVLYGLPTLKFG 531
GVREWQSLISG+ + GG F+YYGPGRCLSKLPP++L GLS SC+AAILIDRAD S R ESKQDT KS +E+E E P Q AALFSL GCQSV+LN+W TLHNNRR+ CSLFRGWGEE L LG+A++A+RG+V +KPRARFCTVLYGLPTLK+G
Sbjct: 3080 GVREWQSLISGNGSAGEGG-------FVYYGPGRCLSKLPPKHLVGLSASCKAAILIDRADTSVSRRLESKQDTLKSPEELEAEEPAQTAALFSLVGCQSVVLNMWSVTLHNNRRVICSLFRGWGEEGLALGNALAAVRGDVGIKPRARFCTVLYGLPTLKYG 3235
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: A0A7S2G932_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G932_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.530e-27 Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 1
Query: 1 VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLSKLPPRYLAGLST-SCQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDA 444
+W+G+ G + +P V EWQ+++ ++ GGFL+YGPGR LS LPP L GL C+ +L+D+ADND S RR+SK D+ + + LERP++ AAL++LAG V++N W S+ H NRR+ F G T GDA
Sbjct: 305 AGAWSGVKGSERIPSVGEWQAMLR----------QRKNGGFLFYGPGRLLSHLPPDRLVGLDARGCRLVMLVDQADNDMSFRRQSKVDSTRRAAALALERPVEAAALWTLAGAGGVVVNQWASSFHANRRLVMRFFGAMGG---TSGDA 440
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: A0A7S2CWE2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWE2_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.120e-26 Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = 1
Query: 16 GIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLSKLPPRYLAGLSTS-CQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDAV----------------SAIRGEVALKPRARFCTVLYGLPTLKFGE 534
G++G +P EW+ LI ++ GGF+YYGPGRCL+ L P +AGL S C+ L+DRADNDAS R+ D +K+ ++LERP++ L++LAG SVL N WP++ NRR+ LF L +A+ + + ++ LK R F +LYGLP ++ G+
Sbjct: 340 GLSGSKKIPSDGEWKKLIG----------LRKKGGFVYYGPGRCLAHLTPDNVAGLDASGCRVVFLVDRADNDASLSRQVIVDKDKTSHALKLERPVESVVLWTLAGAGSVLFNQWPTSFSANRRLMLKLFGNLASGNSVLSEALLDVTSASGLQDQLGGTTVMSQKLRLKLRVAFNPILYGLPDVRIGK 519
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: A7RGW5_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RGW5_NEMVE) HSP 1 Score: 99.0 bits (245), Expect = 3.270e-22 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 1 VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLSKLPPRYLAGLSTS-CQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDAVSAI 456
+ W G G DH+P V E+Q L++ + GFL+YG RCL LPP+ LA ++ S CQ L+DRA S +R+ ++D+ KS E+ LERPL+ A LFS+AG V+ N W +N+ F EE T G AV ++
Sbjct: 12 AAKWAGTMGTDHLPSVGEFQRLLNEST------------GFLFYGTERCLGTLPPQMLAPMNISDCQVVFLMDRAQTSQSFQRQGREDSTKSVSELCLERPLETAMLFSMAGAGCVVANAWNCQFEDNKDKINKFFFVLLEEGRTTGQAVRSL 152
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: B3S8Y7_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S8Y7_TRIAD) HSP 1 Score: 95.1 bits (235), Expect = 2.840e-19 Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 1 VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLSKLPPRYLAGLST-SCQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNR-RIFCSLFRGWGEECLTLGDAVSAIRGEV----ALKPRAR---------------FCTVLYGLPTL 522
+ W G+ G+DH P + EWQ ++ SA F+YY RCL+ P+YLA L+ C+ +++D+A + S ++K D KS +E++LE PL+ AALF+L+G SV++N W + L N+ RI + E+ L D S+ +G + A++ R R + TV+YGLP L
Sbjct: 1388 TNRWYGLMGNDHAPSLGEWQRILLQSSA------------FIYYAYERCLADFSPKYLAPLNLPDCRLVVILDQAHSYQSFHNQAKIDAQKSVEELQLEEPLETAALFTLSGVGSVVINQWGTKLQQNKERIRQFIGDPVKEQKLLEQDLASSHKGSLDIAAAVEARRREEEENTNSVQLSYDWYNTVIYGLPNL 1570
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: A0A369SAE3_9METZ (Cilia-and flagella-associated protein 46 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SAE3_9METZ) HSP 1 Score: 92.8 bits (229), Expect = 1.870e-18 Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 1 VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLSKLPPRYLAGLST-SCQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDAVSAI 456
+ W G+ G+DH P + EWQ ++ SA F+YY RCL+ P+YLA L+ C+ +++D+A + S ++K D KS +E++LE PL+ AALF+L+G SV++N W + L N+ G T+G V A+
Sbjct: 2505 TNRWYGLMGNDHAPSLGEWQRILLQSSA------------FIYYAYERCLADFSPKYLAPLNLPDCRLVVILDQAHSYQSFHNQAKIDAQKSVEELQLEEPLETAALFTLSGVGSVVINQWGTKLQQNKERIRQFIGGNQTGNKTVGQMVYAL 2645
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: UPI001455D5C7 (cilia- and flagella-associated protein 46-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455D5C7) HSP 1 Score: 82.0 bits (201), Expect = 1.020e-14 Identity = 54/150 (36.00%), Postives = 72/150 (48.00%), Query Frame = 1
Query: 1 VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLSKLPPRYLAGLSTS-CQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDAV 447
+ W GI G DHVP V EW+ A F+ YG R S +PP+ +A + S C IL+D + S R+SK DT KS +E+ LE+ ++ A L SL+G VL N W TL N F +L + E T G V
Sbjct: 2604 TARWEGIQGSDHVPSVGEWEEQFRECQA------------FISYGLERFFSHVPPQKMAPTNLSECLLVILLDLVQTNRSFMRQSKIDTQKSFNELSLEKSVETAMLLSLSGAGCVLANQWHCTLQQNANKFQTLMKALLETGRTTGQTV 2741
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: R7V141_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7V141_CAPTE) HSP 1 Score: 81.6 bits (200), Expect = 1.380e-14 Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = 1
Query: 10 WTGIAGDDHVPGVREWQSLISGDS---AVESGGDGK---RGGGFLYYGPGRCLSKLPPRYLAGLST-SCQAAILIDRADNDASHRRESKQDTNKSKDEVELERPLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDAV 447
W G++G+DHVP ++ L+ AV SG G F++YG R L LPP +A L CQ +++D A S R+SK D K+ D + LERP++ AAL SLAG + ++ N W TL N R E+ L+ G V
Sbjct: 2443 WLGVSGEDHVPRYSPYEKLLGSLQYYFAVSSGEYETYLVEGQAFIFYGMERFLCYLPPHKVASLELPECQFVMMLDLAQTSQSSLRQSKMDVLKTHDVLALERPVESAALLSLAGVKCIMQNQWHCTLQENAHRLRMSMRDMLEKGLSSGQTV 2595
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: A0A8K1CII8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CII8_PYTOL) HSP 1 Score: 79.7 bits (195), Expect = 6.380e-14 Identity = 66/208 (31.73%), Postives = 97/208 (46.63%), Query Frame = 1
Query: 1 VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCL-SKLPPRYLAG--LSTSCQAAILIDRADNDASHRRESKQDTNKSKDEVELER-PLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRGWGEECLTLGDAV------------------SAIRGEVA--------LKPRARFCTVLYGLPTLKFGE 534
+++W VP +WQ + +R GG Y GP R L S + LAG L+ +C +L+DRA+N S RR+SK D K+ E+ LE P A L SL G +++LN W +T ++ RR+ SL G G ++ A+ S+ +G+V LK R RF TV+YGL + FG+
Sbjct: 2366 LAAWKDAVDHGQVPTTTDWQQALL----------TRRFGGLCYVGPTRVLGSFVSLSSLAGMNLANACYVLLLLDRAENTTSARRQSKLDGEKAAWELALEEDPYACALLSSLCGVNAIVLNQWTTTFNSTRRLANSLLSGLGRG-QSIAKALRRYPDGTVPTLPRSPKRKSSFKGQVGASEKPTYRLKNRVRFNTVMYGLGHMSFGQ 2562
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Match: A0A2D4BDA5_PYTIN (T-complex protein 1 subunit gamma n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDA5_PYTIN) HSP 1 Score: 77.4 bits (189), Expect = 3.990e-13 Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = 1
Query: 1 VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCL-SKLPPRYLAG--LSTSCQAAILIDRADNDASHRRESKQDTNKSKDEVELER-PLQVAALFSLAGCQSVLLNLWPSTLHNNRRIFCSLFRG 411
+++W + P +WQ + G+R GG Y GP R + S LP + LA LSTSC +L+DRA+N + RR+SK D++K++ +V LE P A L SL G ++++N W ST H+ RR+ ++ G
Sbjct: 1767 LAAWRDLVDHGQPPTPTDWQLAVM----------GRRAGGVCYVGPNRVVGSLLPLQTLAAMNLSTSCYVLLLLDRAENAVTARRQSKIDSDKARWQVRLEDDPYACALLCSLCGVNALVINQWTSTFHSARRLASAVLGG 1897 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3133.8462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3133.8462.1 >prot_H-paniculata_contig3133.8462.1 ID=prot_H-paniculata_contig3133.8462.1|Name=mRNA_H-paniculata_contig3133.8462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp VSSWTGIAGDDHVPGVREWQSLISGDSAVESGGDGKRGGGFLYYGPGRCLback to top mRNA from alignment at H-paniculata_contig3133:8845..11583+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3133.8462.1 ID=mRNA_H-paniculata_contig3133.8462.1|Name=mRNA_H-paniculata_contig3133.8462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2739bp|location=Sequence derived from alignment at H-paniculata_contig3133:8845..11583+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3133:8845..11583+ >mRNA_H-paniculata_contig3133.8462.1 ID=mRNA_H-paniculata_contig3133.8462.1|Name=mRNA_H-paniculata_contig3133.8462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at H-paniculata_contig3133:8845..11583+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |