mRNA_H-paniculata_contig3119.8435.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: D8LTA6_ECTSI (SUN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA6_ECTSI) HSP 1 Score: 204 bits (518), Expect = 9.910e-64 Identity = 100/131 (76.34%), Postives = 118/131 (90.08%), Query Frame = 1
Query: 1 MVPDKEDDELEQGAPRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQPAFAR 393
MVPD EDD +Q P+ V LQNYAS+DSGAV+LE+SP SKGM NLL++++D YAISPCE+KQWAV GLSEDI+VR++ I SHEKYSSL+K+FQVLASQTYPVNEWLDLGT++AKFVQGEQTFE+PQPAFAR
Sbjct: 15 MVPDVEDDGAKQ--PKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFAR 143
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A6H5JRG7_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG7_9PHAE) HSP 1 Score: 195 bits (496), Expect = 2.620e-55 Identity = 92/117 (78.63%), Postives = 109/117 (93.16%), Query Frame = 1
Query: 43 PRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQPAFAR 393
P+ V LQNYAS+DSGAV+LE+SP SKGM NLL++++D YAISPCE+KQWAV GLSEDI+VR++ I SHEKYSSL+K+FQVLASQTYPVNEWLDLGT++AKFVQGEQTFE+PQPAFAR
Sbjct: 202 PKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFAR 318
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A835YLS6_9STRA (UNC-like C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS6_9STRA) HSP 1 Score: 175 bits (444), Expect = 8.640e-54 Identity = 85/131 (64.89%), Postives = 106/131 (80.92%), Query Frame = 1
Query: 1 MVPDKEDDELEQGAPRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQPAFAR 393
MVPDKE E + +P L+NYASKDSGAVM+E SPG+KG NLLV+++D Y ISPCEEKQW V GLSEDI+VRT+K+ S+EKYS +VK+FQVLASQ++PV+ W+DLG ++A GEQTFE+P PAFAR
Sbjct: 1 MVPDKE--EGDSAKLKPTKLKNYASKDSGAVMMEHSPGTKGADNLLVDSKDKYTISPCEEKQWVVIGLSEDILVRTIKLGSYEKYSRIVKEFQVLASQSFPVDNWMDLGVFTAADAHGEQTFELPSPAFAR 129
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A482SF98_9ARCH (SUN domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SF98_9ARCH) HSP 1 Score: 130 bits (327), Expect = 2.230e-35 Identity = 66/126 (52.38%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 4 VPDKEDDELEQGAPRPVLLQNYASKDSGAVMLESSPGS-KGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQ 378
V D+E D + L N+AS +GAV+L+SSP S KG NLL +++D Y+ISPC EK+W V GLSEDI + ++ + ++E+YSSLVKDFQ+LAS +YP +EW+DLGTY+A+ GEQTF + Q
Sbjct: 31 VDDEEVDATNSNSRSSGNLFNFASATAGAVVLDSSPSSAKGYYNLLNSDKDKYSISPCSEKRWVVIGLSEDIQITSVVLANYERYSSLVKDFQLLASGSYPTSEWIDLGTYTAEPKLGEQTFNITQ 156
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: B8CB42_THAPS (SUN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB42_THAPS) HSP 1 Score: 132 bits (332), Expect = 3.250e-33 Identity = 70/126 (55.56%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 22 DELEQGAPRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNE--WLDLGTYSAKFVQGEQTFEVPQPAFAR 393
DE E G P+ +L +YASK +GA +LE SP KG +NLL + D YAI+PCEEK++ V GLSEDI+V+ +K+ ++E+YSS V++FQVLASQ YP W DLGTY+A GEQTFE+ +PA+AR
Sbjct: 295 DEGEDG-PKEHVLVDYASKLAGAQILEKSPSLKGTSNLLTGDIDKYAIAPCEEKKYVVIGLSEDILVKRIKLSNYERYSSHVREFQVLASQEYPAPSEYWNDLGTYTALSKSGEQTFELNEPAWAR 419
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A7S3GXC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXC2_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.750e-33 Identity = 65/126 (51.59%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 1 MVPDKEDD-ELEQGAPRPVLLQNYASKDSGAVMLESSPGS-KGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEV 372
+V DK+DD E A R V + N+AS+ +GAV+L+ SP S KG LL +++D Y ISPCEEK+W V GLSEDI++ ++++ ++EKYSS +KDFQ+LAS +YP +EW++LG Y+AK G Q F V
Sbjct: 27 IVKDKDDDDEANTKAKRAVKMFNFASQSAGAVILDKSPASAKGFHYLLNDDKDKYGISPCEEKKWVVIGLSEDILITSIEVSNYEKYSSTLKDFQLLASYSYPTDEWINLGQYTAKPQLGAQLFNV 152
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A8J2WR33_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WR33_9STRA) HSP 1 Score: 127 bits (320), Expect = 5.900e-32 Identity = 64/131 (48.85%), Postives = 88/131 (67.18%), Query Frame = 1
Query: 1 MVPDKEDDELEQGAPRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQPAFAR 393
MV D +D++ AP+ V+ NYASKD+GA+++E S SKG NLLV+N+D Y I+ C EK++ V GLSEDI + + + +EKYSS V+DF VL SQT+P EWL LG + A + + EQ F P P + R
Sbjct: 75 MVQDVDDEDDAPAAPKKVI--NYASKDAGALVVEKSGTSKGFDNLLVDNKDKYGITDCGEKKYVVIGLSEDIRMTELILCQYEKYSSGVRDFDVLGSQTFPTKEWLHLGAFEATYAKREQLFVFPDPKYVR 203
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A7S1D9Q2_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q2_CYCTE) HSP 1 Score: 125 bits (315), Expect = 6.240e-31 Identity = 64/129 (49.61%), Postives = 93/129 (72.09%), Query Frame = 1
Query: 7 PDKEDDELEQGAPRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQPAFAR 393
P+ EDD P ++ +YAS +GA++LE SP KG +NLL N+D YAISPCEEK++ V GLSEDI+V+ + + ++E+YSS VKDFQ+L SQT + +W++LGTY+A G+Q F++ QP++AR
Sbjct: 205 PEDEDD-----GPSEIVTVDYASTTAGALILEKSPHMKGTSNLLNGNKDKYAISPCEEKKFVVIGLSEDILVKQVCLANYERYSSRVKDFQILGSQT--MGKWVNLGTYTADPNNGQQKFDLGQPSWAR 326
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A7S4IV93_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IV93_9STRA) HSP 1 Score: 125 bits (314), Expect = 8.560e-31 Identity = 58/113 (51.33%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 55 LLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQPAFAR 393
L+ +YA+K+SGA++LE SP KG +NLL ++ D YAI+PCE++++ V GLSEDI+V+ +K+ ++E+YSS ++FQVL SQT ++W DLGT+ A GEQ+FE+ +PA+AR
Sbjct: 130 LVVDYANKNSGAIILEKSPSMKGTSNLLKSDNDQYAIAPCEDRKFVVVGLSEDILVKQIKLSNYERYSSHPREFQVLGSQTNTGSDWADLGTFIADPGNGEQSFELDEPAWAR 242
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Match: A0A7S2UMH9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMH9_9STRA) HSP 1 Score: 116 bits (291), Expect = 7.460e-28 Identity = 57/128 (44.53%), Postives = 90/128 (70.31%), Query Frame = 1
Query: 10 DKEDDELEQGAPRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRDSYAISPCEEKQWAVFGLSEDIMVRTMKIISHEKYSSLVKDFQVLASQTYPVNEWLDLGTYSAKFVQGEQTFEVPQPAFAR 393
D DDE +G + +YA+K SGA++LE SP KG +NLL ++ D YAI+PCE+K++ V GLSEDI+V+ + + ++E+YSS VK+F + S T + +W ++GT++AK GEQ+F++ +P +AR
Sbjct: 159 DPHDDE--EGGKMSRVTLDYANKSSGALILEKSPTMKGSSNLLNDDMDRYAIAPCEDKKYVVVGLSEDILVKQVFLANYERYSSHVKEFTIFGSTTMLMGDWAEVGTFTAKPRNGEQSFDLTEPVWAR 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3119.8435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3119.8435.1 >prot_H-paniculata_contig3119.8435.1 ID=prot_H-paniculata_contig3119.8435.1|Name=mRNA_H-paniculata_contig3119.8435.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp MVPDKEDDELEQGAPRPVLLQNYASKDSGAVMLESSPGSKGMANLLVNNRback to top mRNA from alignment at H-paniculata_contig3119:17513..18570+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3119.8435.1 ID=mRNA_H-paniculata_contig3119.8435.1|Name=mRNA_H-paniculata_contig3119.8435.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1058bp|location=Sequence derived from alignment at H-paniculata_contig3119:17513..18570+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3119:17513..18570+ >mRNA_H-paniculata_contig3119.8435.1 ID=mRNA_H-paniculata_contig3119.8435.1|Name=mRNA_H-paniculata_contig3119.8435.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at H-paniculata_contig3119:17513..18570+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |