prot_H-paniculata_contig31140.8423.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31140.8423.1
Unique Nameprot_H-paniculata_contig31140.8423.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length362
Homology
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 250 bits (638), Expect = 1.030e-73
Identity = 140/364 (38.46%), Postives = 222/364 (60.99%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVK-ISAPESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +L ++  WE  +   LP  RKA+  KW+FK K   DGS+ R++ARLVAQ FSQ    D+ E  +PV R  +  TV +   +   +L  M+V AA+LN  +E+E+++K P  F    ++     +L KSLYGLKQS RCWN+ LDE L  IG  ++ +D C+Y   ++G     +VA+HVDD+++AG+  EK+ + K +I++RF++KD+G L  +LG++V ++  +  + I Q +Y   +++ Y ++ C+ V TPV+   K +SA E ++       N  E++   GSL+Y S+ TRPDI +AV+  A+ + +P  E ++  K IFRYL    ++G+ +   +N   + GF DADWA D+ DRKS
Sbjct:  171 SLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSEL-----FNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKS 520          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 247 bits (631), Expect = 2.270e-72
Identity = 142/364 (39.01%), Postives = 217/364 (59.62%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVKIS-APESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +L  N  W   +   LP  RKA+ +KW+F+ K   DG+V  ++ARLVAQ FSQ   +D+ E  +PVAR  +  TV +  A+H  +L  M+V  A+LN  ++EE+++K    F    ++   V RLR+S+YGLKQS RCWN+ LD  L  +G  ++T D C+Y  ++EGGE   ++AV+VDD+++AG+ + K++E K  ++++F+MKD+G L   LG++V     +  I I Q +Y + VL  + ++  +   TPV    K+  A + + +  + N     Y+   G L+Y ST+TRPDIAYAV   AR + DP  E +   K I RYL+   D G+ + G     S  G+ DADWA D++DRKS
Sbjct:    7 SLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVN-----YQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKS 359          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 252 bits (643), Expect = 1.530e-71
Identity = 142/364 (39.01%), Postives = 222/364 (60.99%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVK-ISAPESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +L ++  WE  +   LP  RKA+  KW+FK K   DGS+ R++ARLVAQ FSQ    D+ E  +PV R     TV +   +   +L  M+V AA+LN  +E+E+++K P  F    ++   V +L KSLYGLKQS RCWN+ LDE L  IG  ++ +D C+Y   ++G     +VA+HVDD+++AG+  EK+ + K +I++RF++KD+G L  +LG++V ++  +  + I Q +Y   +++ Y ++ C+ V TPV+   K +SA E ++       N  EY+   GSL+Y S+ TRPDI +AV+  A+ + +P  E ++  K IFRYL    ++G+ +   +N   + GF DADWA D+ DRKS
Sbjct:  785 SLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSEL-----FNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKS 1134          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 243 bits (620), Expect = 3.290e-71
Identity = 140/364 (38.46%), Postives = 216/364 (59.34%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVKIS-APESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +L  N  W   +   LP  RKA+ +KW+F+ K   DG+V  ++ARLVAQ FSQ   +D+ E  +PVAR  +  TV +  A+H  +L  M+V  A+LN  ++EE+++K P  F    ++   V RLR+S+ GLKQS RCWN+ LD  L  +G  ++T D C+Y  ++EGGE   ++AV+VDD+++AG+ + K++E K  ++++F+MKD+G     LG++V +   +  I I Q +Y + VL  + ++  +   TPV    K+  A + + +  + N     Y+   G L+Y ST+TRPDIAYAV   AR +  P  E +   K I RYL+   D G+ + G     S  G+ DADWA D++DRKS
Sbjct:  155 SLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKE-HLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVN-----YQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKS 507          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 234 bits (598), Expect = 4.600e-70
Identity = 140/365 (38.36%), Postives = 208/365 (56.99%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIA-GRREKVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVKISAP--ESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +L KN  WE      LP GRKAI +KW+FK K   +G + RY+ARLVA+ F Q    DF E  APVA+ ++   + S  A++   L  M+V  A+LN  +EEE+++K P  F   ++    V +L+++LYGLKQS R WN T+DEF+  IG  +  TD C+Y  RD+  +  + V ++VDDL++A    + +   K  +S+RF M DLG L   LG+EV RD  +G +++ Q+ ++  VL  + + +C+ V TP +  +K++    E   K  +       YR   G+++Y    TRPD+A AV   ++   DPC   +   K + RYL   P  GI F G  +G  L G+ DADWA DIE R+S
Sbjct:   19 SLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDD-TMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRS 375          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A2K3M5H6_TRIPR (Retrotransposon protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M5H6_TRIPR)

HSP 1 Score: 232 bits (592), Expect = 1.420e-68
Identity = 138/363 (38.02%), Postives = 212/363 (58.40%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRREK-VDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVKISAPESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            ++VKN  W+  D   LP G++AI  KW++K K  EDGSV +Y+ARLVA+ +SQ    DF E  APVARM T  TV +  A+ + ++  ++V +A+LN  +EEE++VK P  F    ++   V +L K+LYGLKQ+ R WN+ +D + +  G  +S ++  LY  R+  G   L+V ++VDDL+ AG     V  FK  + + + M DLG +   LGI+V++ +  G I I+Q  YI ++L+ + L+ C+ V TP+    K+   + A++      +   YR + GSLIY  T TRPDI ++V   +R   +P +  F+ +K I RYL      GI +  K   + L G+ D+DWA   +DRKS
Sbjct:    7 SIVKNRTWQLVD---LPTGKEAIGLKWVYKTKYNEDGSVQKYKARLVAKGYSQQPGVDFNETFAPVARMETIRTVLALAAQLELQVFQLDVKSAFLNGELEEEVYVKQPQGFEAKGKERK-VYKLHKALYGLKQAPRAWNSKIDAYFLQNGFVKSPSEPSLYVKRN--GANFLMVCLYVDDLIYAGTNPNMVQSFKEAMMKEYEMTDLGLMKYFLGIQVKQTK--GEIFITQEKYIHDLLKKFRLESCKPVSTPMAMNEKLQLNDGAEQ-----ADPKVYRSLVGSLIYL-TNTRPDIVHSVSLVSRFMNEPSKLHFAAAKRILRYLQGTKKLGIKYV-KEEDNKLVGYTDSDWAGSFDDRKS 354          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL)

HSP 1 Score: 230 bits (586), Expect = 1.300e-67
Identity = 138/350 (39.43%), Postives = 207/350 (59.14%), Query Frame = 0
Query:   16 LPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVI-AGRREKVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPV--EGKVKISAPESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            LP GRKAI + W + +K  E+G VAR +ARLVA   SQ+   D+ E  APV R+ +     +  A  + E+  M++  AYLN  ++EE+F++ PP F   +     V RL+KSLYGL QSGR WN   D+ +  IGL ++  D+C+Y+ R+  GE  + V V VDDL+I A  +++ +  K  +   F MKDLG   +++GIEV RDR  GT+T+SQ  YI  +L  Y   +  GV TP+  +   K+        P+ P+  + EY+ M G L+YA+  TRPDIAYAV + ++   +P  E  +  K +F YLS   D+G+ +G + +    EG+ DA++A +++DRKS
Sbjct:   13 LPEGRKAIGSMWTYVKKSDENGLVARLKARLVALGNSQIPGIDYTETYAPVVRLESLRAAIALAAIENLEMIQMDIRGAYLNGELKEEVFMQQPPGFEDGTGR---VWRLKKSLYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYY-RERDGE-RVWVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARA-EYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFHYLSGTRDYGLVYGLQRDAVVFEGYCDANYAANLDDRKS 356          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 234 bits (597), Expect = 4.510e-67
Identity = 133/352 (37.78%), Postives = 211/352 (59.94%), Query Frame = 0
Query:   15 RLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDD-LVIAGRREKVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVKIS---APESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +LP G++AI TKW+FK K   +G++ RY+ARLV +  SQ    D+ E  +PV R ++   +F+  A+HD  +  ++   A+LN  ++EE+F+K P  +S  S     V RL KSLYGLKQ+ + WN+ L+E L+ +GL RS  D C+YF   E   + + VA++VDD LV +  ++     K+ +S + +MKD+GS S +LG+ V+RD     I + QS YI  VL+ + +D+C  V TP++   K++    P+S ++  E       Y    GSL+YA+  TRPDI++AV+  +R +++P +  +   K + RYL    + GI F  + +  SL G+ DADWA D++ R+S
Sbjct:  269 KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGR---VCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEME--KVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF--RKSAQSLTGYCDADWAGDLDQRRS 611          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A438FU81_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FU81_VITVI)

HSP 1 Score: 226 bits (576), Expect = 4.580e-67
Identity = 138/364 (37.91%), Postives = 212/364 (58.24%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVKISAPESADKPSEPNGNS-TEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +L+ N  WE  +   LPVG+KA+  KW++++K + DGS  RY+ARLV + F Q    D+ EI +PV +MS    V    A  +  LE ++V   +L+  +EE+L++  P  F    ++   V +LRKSLYGLKQ+ R W    D F+  IG  R   D C Y    +   + +++ ++VDD++I G   EK++  K  +S++F MKDLG+  ++LG+ + RD+ NGT+ +SQS Y+++VL  ++++E + V TP+ G  K+S  +S     E +  S   Y    GSL+YA   TRPDIA+AV   +R    P ++ +   K I RYL    D  + F G S    L+G+VDAD+A DI+ RKS
Sbjct:    3 SLLGNQTWELTE---LPVGKKALHNKWVYRKKNENDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSIIRLVLGMVATENLHLEQLDVKTTFLHGDLEEDLYMIQPEGFIVQGQE-NLVCKLRKSLYGLKQALRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDN--SYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSKFNMNEAKPVSTPLGGHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASL--KLQGYVDADFAGDIDSRKS 357          
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Match: A0A182H8F8_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H8F8_AEDAL)

HSP 1 Score: 234 bits (597), Expect = 6.320e-67
Identity = 135/363 (37.19%), Postives = 208/363 (57.30%), Query Frame = 0
Query:    1 ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQEFSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVIGLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGVPTPVEGKVKISAPESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYAVHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVDADWAEDIEDRKS 362
            +L KN  W+  D   LP G++AI +KW+FK K   DG+V RY+ARLVA+  SQ    D+ E  APV R+ST  T+ +   + +  +  M+V  A+LN  + E ++++LP  F   ++    V +L KSLYGLKQ+ R WN    +F+V +G +RS  DSCLY  R + G  + L+ ++VDD+++A    +++   K +++Q F M D+  L+  LG++V R+   GT+TI+QS Y+R +L+ +D+  C+ V TP+E  +K+   ESA     P      YR + G L Y    +RPDI+ AV+  +R         ++  K + RYL    D+ + +    N   L GF DADW  D+ DRKS
Sbjct:  278 SLEKNRTWDLVD---LPAGKRAISSKWVFKIKYAADGNVDRYKARLVAKGCSQRHGFDYQETYAPVVRISTVRTLLAVAVQKNLHVHQMDVRTAFLNGNLSETVYMRLPTGFERGTK----VCKLNKSLYGLKQAPRSWNERFHKFMVHLGFERSQHDSCLYV-RQKNGVVSYLI-LYVDDIILASSSLDELVRIKRSLTQEFEMDDMKELNHFLGLKVERNMKEGTLTINQSQYVRALLKRFDMQNCKPVSTPLEVNLKLEKNESAPVTQHP------YRELVGCLTYLMLSSRPDISSAVNFLSRFQSRATDTHWTHLKRVLRYLQGTKDYNLVYKRSENPKPLVGFADADWGSDVNDRKS 625          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31140.8423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9HZ03_PARCT1.030e-7338.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KES8_PARCT2.270e-7239.01Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7HEL0_PARCT1.530e-7139.01Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7JEY7_PARCT3.290e-7138.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5D6YB57_9STRA4.600e-7038.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2K3M5H6_TRIPR1.420e-6838.02Retrotransposon protein n=1 Tax=Trifolium pratense... [more]
A0A146H3U8_MYCCL1.300e-6739.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C9RAA9_9HYME4.510e-6737.78POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
A0A438FU81_VITVI4.580e-6737.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A182H8F8_AEDAL6.320e-6737.19Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 16..254
e-value: 5.2E-59
score: 199.8
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..225
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31140contigH-paniculata_contig31140:12..1160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31140.8423.1mRNA_H-paniculata_contig31140.8423.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31140 12..1160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31140.8423.1 ID=prot_H-paniculata_contig31140.8423.1|Name=mRNA_H-paniculata_contig31140.8423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=362bp
ALVKNGAWESEDPGRLPVGRKAIRTKWIFKRKLKEDGSVARYRARLVAQE
FSQVVDEDFFEISAPVARMSTSSTVFSQPAEHDFELEGMEVDAAYLNAPV
EEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRCWNNTLDEFLVVI
GLDRSTTDSCLYFSRDEGGETNLLVAVHVDDLVIAGRREKVDEFKHNISQ
RFRMKDLGSLSRLLGIEVRRDRPNGTITISQSSYIREVLRIYDLDECRGV
PTPVEGKVKISAPESADKPSEPNGNSTEYRGMAGSLIYASTRTRPDIAYA
VHQAARRTEDPCREDFSTSKLIFRYLSTVPDFGITFGGKSNGHSLEGFVD
ADWAEDIEDRKS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like