prot_H-paniculata_contig31124.8417.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31124.8417.1
Unique Nameprot_H-paniculata_contig31124.8417.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: D7G858_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G858_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.440e-35
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
Query:    3 DISELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTD 65
            D+SELPLTLPEMESFEPGDDPQGCL RA DWR+FQ+DGKWFARETNTMPQWAGSCWYYLR+TD
Sbjct:  502 DVSELPLTLPEMESFEPGDDPQGCLTRAPDWRFFQRDGKWFARETNTMPQWAGSCWYYLRFTD 564          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S2SQV0_9STRA (Leucine--tRNA ligase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQV0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.210e-33
Identity = 51/61 (83.61%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    5 SELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTD 65
            ++LPLTLP+M +FEPGDDPQGCLARAT+WRYFQ+DG+WFARETNTMPQWAGSCWYYLR+ D
Sbjct:    8 ADLPLTLPDMSNFEPGDDPQGCLARATEWRYFQQDGQWFARETNTMPQWAGSCWYYLRFID 68          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S2RFM0_9STRA (Leucine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFM0_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.910e-33
Identity = 55/64 (85.94%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    3 DISELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTDN 66
            D SELPL LP ME F+PGDDP GCLARA DWRYFQKDGKWFARETNTMPQWAGSCWYY RY DN
Sbjct:  551 DESELPLELPHMEDFQPGDDPAGCLARAADWRYFQKDGKWFARETNTMPQWAGSCWYYFRYIDN 614          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S2XSK2_9STRA (Leucine--tRNA ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.910e-33
Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    3 DISELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTDNT 67
            D +ELPLTLPE++ F+PGDDP GCLARA DWRYFQKDGKWFARETNTMPQWAGSCWYYLRY D T
Sbjct:  551 DEAELPLTLPEIDDFKPGDDPAGCLARAKDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYLDPT 615          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S2YMF9_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMF9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.190e-33
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    6 ELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTDN 66
            +LPL LP ME F+PGDDP GCLARA DWRYFQKDGKWFARETNTMPQWAGSCWYY R+TDN
Sbjct:   11 DLPLKLPLMEDFQPGDDPAGCLARAKDWRYFQKDGKWFARETNTMPQWAGSCWYYFRFTDN 71          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S2XZA7_9STRA (Leucine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZA7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.070e-32
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    6 ELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTD 65
            +LPL LPEM+ FEPGDDPQGCLARA DWRYF+KDGKWFARETNTMPQWAGSCWYY+R+ D
Sbjct:   99 DLPLRLPEMDRFEPGDDPQGCLARAVDWRYFEKDGKWFARETNTMPQWAGSCWYYMRFAD 158          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S0DVS4_9EUKA (Leucine--tRNA ligase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DVS4_9EUKA)

HSP 1 Score: 123 bits (308), Expect = 2.540e-32
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    7 LPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTD 65
            +PL LP+ME FEPGDDPQGCLARA DWRYF+KDGKW+ARETNTMPQWAGSCWYYLR+ D
Sbjct:    1 MPLKLPDMERFEPGDDPQGCLARAADWRYFEKDGKWYARETNTMPQWAGSCWYYLRFID 59          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S1U728_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U728_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.530e-32
Identity = 51/63 (80.95%), Postives = 59/63 (93.65%), Query Frame = 0
Query:    3 DISELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTD 65
            D ++LPLTLP+M++FEPGDDPQGCLARA DWR+F+KDGKWFARETNTMPQWAGSCWYY R+ D
Sbjct:  403 DEADLPLTLPDMDNFEPGDDPQGCLARAVDWRFFEKDGKWFARETNTMPQWAGSCWYYWRFCD 465          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7R9YFC1_9STRA (Leucine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFC1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.720e-32
Identity = 51/63 (80.95%), Postives = 59/63 (93.65%), Query Frame = 0
Query:    3 DISELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTD 65
            D ++LPLTLP+M++FEPGDDPQGCLARA DWR+FQKDGKW+ARETNTMPQWAGSCWYY R+ D
Sbjct:  477 DEADLPLTLPDMDNFEPGDDPQGCLARAVDWRFFQKDGKWYARETNTMPQWAGSCWYYWRFCD 539          
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Match: A0A7S4DRP5_9EUKA (Leucine--tRNA ligase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DRP5_9EUKA)

HSP 1 Score: 123 bits (309), Expect = 3.040e-31
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    6 ELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTMPQWAGSCWYYLRYTD 65
            ELPL LPEM++F+PGDDPQGCLARA DWRYF KDGKW+ARETNTMPQWAGSCWYYLR+ D
Sbjct:  565 ELPLQLPEMDNFQPGDDPQGCLARAADWRYFLKDGKWYARETNTMPQWAGSCWYYLRFID 624          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31124.8417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G858_ECTSI1.440e-3590.48Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2SQV0_9STRA3.210e-3383.61Leucine--tRNA ligase n=2 Tax=Rhizochromulina marin... [more]
A0A7S2RFM0_9STRA3.910e-3385.94Leucine--tRNA ligase n=1 Tax=Eucampia antarctica T... [more]
A0A7S2XSK2_9STRA3.910e-3384.62Leucine--tRNA ligase n=1 Tax=Attheya septentrional... [more]
A0A7S2YMF9_9STRA4.190e-3385.25Leucine--tRNA ligase (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2XZA7_9STRA2.070e-3285.00Leucine--tRNA ligase n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0DVS4_9EUKA2.540e-3284.75Leucine--tRNA ligase n=1 Tax=Amorphochlora amoebif... [more]
A0A7S1U728_9STRA4.530e-3280.95Leucine--tRNA ligase (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YFC1_9STRA8.720e-3280.95Leucine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4DRP5_9EUKA3.040e-3185.00Leucine--tRNA ligase n=1 Tax=Lotharella globosa Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 2..67
e-value: 1.8E-16
score: 62.4
IPR002302Leucine-tRNA ligasePANTHERPTHR43740FAMILY NOT NAMEDcoord: 5..65
NoneNo IPR availablePANTHERPTHR43740:SF6LEUCINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIALcoord: 5..65
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 23..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31124contigH-paniculata_contig31124:560..763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31124.8417.1mRNA_H-paniculata_contig31124.8417.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31124 560..763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31124.8417.1 ID=prot_H-paniculata_contig31124.8417.1|Name=mRNA_H-paniculata_contig31124.8417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
DQDISELPLTLPEMESFEPGDDPQGCLARATDWRYFQKDGKWFARETNTM
PQWAGSCWYYLRYTDNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR002302Leu-tRNA-ligase