prot_H-paniculata_contig3109.8408.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3109.8408.1
Unique Nameprot_H-paniculata_contig3109.8408.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: D7FUW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW1_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 3.730e-79
Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 0
Query:   29 LVMVAFICACAATGKNSGGGSASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDEKPADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMDDSTKYEDDPVPEVSTQPPIGV 172
            +VMVAFICACA+   + G GSASLGFAA+WTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVV IMSQTMLVLFAVFAGRAST  D DEKPADRAFAA CFFLWIVY+ FAGMLAVFREDIIMDD+TKYEDDPVPE S QPPIGV
Sbjct:    1 MVMVAFICACASAAHSDGDGSASLGFAAVWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVIIMSQTMLVLFAVFAGRASTAEDVDEKPADRAFAAFCFFLWIVYSTFAGMLAVFREDIIMDDTTKYEDDPVPEASGQPPIGV 144          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: A0A836CM66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM66_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.100e-66
Identity = 111/163 (68.10%), Postives = 129/163 (79.14%), Query Frame = 0
Query:    1 MSLRNALCAPCDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSG----GGSASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDEKPADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMDD--STKYE 157
            M +R+ +CAPC +NPQKAIAYAWFTSI+LV +AF+CAC A  K  G     GS SL FA+IWT LLLI L +GGS+VMR+YRTSLAVGFFLGVV IMSQ ML+LFAVFAGRA  T++  EKPAD AFAA CFFL++VYT FA MLA+FR DII D   STKY+
Sbjct:    1 MGIRDNVCAPCARNPQKAIAYAWFTSIILVAIAFVCACVAASKQEGVDAVKGSKSLAFASIWTALLLILLCIGGSMVMRRYRTSLAVGFFLGVVIIMSQQMLILFAVFAGRAEDTTNDSEKPADSAFAAFCFFLFVVYTGFAIMLAMFRADIIADTNTSTKYD 163          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: A0A7S2V157_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V157_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.960e-52
Identity = 89/172 (51.74%), Postives = 117/172 (68.02%), Query Frame = 0
Query:    2 SLRNALCAPCDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSG-GGSASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDEKPADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMDDSTKYEDDPVPEVSTQPPIGV 172
            S  + LC PC KN +K I Y WFTS+  V +AFI AC AT + S  G + +LGFAAIWTVLL++ L +GGSLVM+K++TSLA+GFFLGVV +MSQ  L+LFA+FAGRA  T  + E  AD+  A+ CFFL+++Y  FA +L  FR+D+I D      D+     S  PP G+
Sbjct:    3 SFHDTLCGPCAKNARKTITYTWFTSLAFVAIAFIIACVATSRISAEGDNRALGFAAIWTVLLMVALGIGGSLVMKKFQTSLAIGFFLGVVIMMSQQCLILFAIFAGRAGATDSESESSADKGMASFCFFLFLIYGFFASVLGYFRKDLIRDADAMSADE-----SQMPPQGM 169          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: A0A6V1N1N4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N1N4_HETAK)

HSP 1 Score: 153 bits (386), Expect = 2.600e-44
Identity = 81/148 (54.73%), Postives = 104/148 (70.27%), Query Frame = 0
Query:    3 LRNALCAPCDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSGGGS-ASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDEKPADRAFAAXCFFLWIVYTAFAGMLAVFREDII 149
            + + LC  C +NP K I Y W  S+ LV ++FICAC A  K S  GS  ++GFA ++TVLL+I LSVGG+ V+RKY+T LAVGFFLGVV +MSQ  L++FAVFAGRA  T+   E  AD A A  CF L++VY  FAG+LA FR D++
Sbjct:    4 IHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLM 151          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: F0YCM6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCM6_AURAN)

HSP 1 Score: 124 bits (312), Expect = 9.970e-33
Identity = 69/160 (43.12%), Postives = 100/160 (62.50%), Query Frame = 0
Query:   10 PCDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSGGGSASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDE---KPADRAFAAXCFFLWIVYTAFAGMLAVFR--------EDIIMDDSTKYED 158
            P     ++ +AYAWFTSI+LV+ +F  A     ++ G G+  LGFAA+WT +L + +SVGG++VMRK++T  A+G FLGVVT+M+   L++ A+F G+ S   D+D+   K AD  F    FFL++VY  FA +LAVFR         D+I +DS    D
Sbjct:   17 PARARARRFVAYAWFTSILLVLASFFAAAVVADRHRGKGTGGLGFAAVWTTILCLFISVGGTVVMRKFQTGFAIGIFLGVVTVMANQCLMMVAIF-GQWSGNEDEDKESKKAADDTFTTFSFFLFVVYAFFASLLAVFRASFGACFGNDLIKEDSVASTD 175          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: A0A482RX29_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX29_9ARCH)

HSP 1 Score: 103 bits (258), Expect = 2.530e-25
Identity = 52/110 (47.27%), Postives = 80/110 (72.73%), Query Frame = 0
Query:   44 NSGGGSASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDK-DEKPADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMDD 152
            +S GG  + GF A+WT +LLI +SV G+++MR+Y+T+L++GF +G++ IM+Q ML+LFAVFA +A+ + +   E  +  A A   FFL++VY AF  ML+VFR+D+I  D
Sbjct:    2 SSKGGDGAAGFMAVWTCILLIVISVIGTVIMRRYQTALSIGFLIGIIFIMTQQMLILFAVFADQANNSGNTLVETQSQEAMAVFAFFLFLVYAAFGSMLSVFRQDVIKQD 111          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: D7FX95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX95_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 4.200e-25
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 0
Query:   12 DKNPQKAIAYAWFTSIVLVMVAFICAC--AATGKNSGGGSASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDEKPADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMDDSTKYEDD 159
            DKNP K ++Y+W+  ++   V  + A   A+T  +S  GS +  FA++WT+ +++G+SV G+++++KY T LAVG  LG+ T+MSQ M VLFAVF   A    +      DR  A   FFL+++Y  F+ +L  +R  ++    T   +D
Sbjct:   18 DKNPSKVVSYSWYLVLIFAAVDVLVALINASTNDSSANGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSND 167          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: A0A5D6YEA3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEA3_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.350e-23
Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 0
Query:   11 CDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSGGGSA---SLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDEKP-------ADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMDDST 154
            C  NP+  I Y WF ++V   +  + A  A   N+G G A   SLGF  +W + L+IGLSVGG++VMRKY+T LAVGFF+GVV +MS  M  L  +FAG A     + +K        ++ A +   FF++++Y AF+ +L   R  II +  T
Sbjct:   15 CCTNPKLLITYLWFITLVFGFMYALAAIVAAVNNNGSGEADSKSLGFVGVWAMFLIIGLSVGGTMVMRKYQTPLAVGFFIGVVIMMSLQMFTLSVLFAGAAYLARQERDKGNTSVSVHSNDAGSIFSFFMFVLYLAFSIVLIKHRNVIIKEGVT 168          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: A0A8K1CCX0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCX0_PYTOL)

HSP 1 Score: 102 bits (253), Expect = 1.790e-23
Identity = 64/155 (41.29%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   11 CDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSGGG---SASLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTT-SDKDEK-------PADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMDDST 154
            C  NP+  I Y WFT+++   +  + A  A   N G G   S SLGF  IW + L++GLSVGG+LVMRKY+T LAVGFF+GVV +M+  M  L  +FAG A     D+D          ++ A A   FF++++Y AF  +L   R  II +  T
Sbjct:   50 CCNNPKILITYLWFTTLIFGFMYALAAIVAAVNNGGSGISSSKSLGFVGIWAMFLIVGLSVGGTLVMRKYQTPLAVGFFIGVVIMMAFQMFSLCVLFAGAAYLARQDRDANHNENVSVTSNDAGAVFSFFMFVLYIAFGVVLIKNRNVIIKESGT 204          
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Match: K3WDT8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDT8_GLOUD)

HSP 1 Score: 100 bits (250), Expect = 2.560e-23
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0
Query:   11 CDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSGGGSA---SLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVLFAVFAGRASTTSDKDEKP-------ADRAFAAXCFFLWIVYTAFAGMLAVFREDIIMD 151
            C  NP+  I Y WF +++   +  + A  A   N+G G A   SLGF  IW +LL+IGLSVGG++VMRKY+T LAVGF +GVV +MS  M  L  +FAG A     + +K        ++ A +   FF++++Y AF+ +L   R  II +
Sbjct:   15 CCNNPKLLITYLWFITLIFGFMYALAAIVAAVNNNGSGEADSKSLGFVGIWAMLLVIGLSVGGTMVMRKYQTPLAVGFLIGVVLMMSLQMFSLSVLFAGAAYLARQERDKGDESTSIHSNEAGSVFSFFMFVLYLAFSIVLVKHRNVIIKE 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3109.8408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUW1_ECTSI3.730e-7986.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CM66_9STRA1.100e-6668.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V157_9STRA4.960e-5251.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1N1N4_HETAK2.600e-4454.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YCM6_AURAN9.970e-3343.13Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482RX29_9ARCH2.530e-2547.27Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
D7FX95_ECTSI4.200e-2536.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6YEA3_9STRA1.350e-2340.26Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CCX0_PYTOL1.790e-2341.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WDT8_GLOUD2.560e-2340.40Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..74
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 19..41
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3109contigH-paniculata_contig3109:13005..16385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3109.8408.1mRNA_H-paniculata_contig3109.8408.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3109 9751..16437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3109.8408.1 ID=prot_H-paniculata_contig3109.8408.1|Name=mRNA_H-paniculata_contig3109.8408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MSLRNALCAPCDKNPQKAIAYAWFTSIVLVMVAFICACAATGKNSGGGSA
SLGFAAIWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVTIMSQTMLVL
FAVFAGRASTTSDKDEKPADRAFAAFCFFLWIVYTAFAGMLAVFREDIIM
DDSTKYEDDPVPEVSTQPPIGV*
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