prot_H-paniculata_contig3106.8399.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3106.8399.1
Unique Nameprot_H-paniculata_contig3106.8399.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length851
Homology
BLAST of mRNA_H-paniculata_contig3106.8399.1 vs. uniprot
Match: D8LLU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU4_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 1.260e-73
Identity = 156/279 (55.91%), Postives = 186/279 (66.67%), Query Frame = 0
Query:   42 LLEAVHRVNVSRVATLLFNGADVNMTDSQGVTPLIISCERGELRMVNLLLEAKASTKMVTNDTQSSCLHIAAKSNAASIVERLLKVERSLEERTNCQGDTPLMLACLSAVETEESENTLAALLQPLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSRATDNHRHGRRTVEYLGQDDPRLRARNRHGHTALHIATFTQSPTAVRMLLEAGADCTVVDKAGRTAMQAALNVVGKVRGLREGFDACLKLLQERWAELEKESQERENLFLGELDVASGG 320
            LLEAVHRVNV R ATLL  GADVN TD+QGVTPLII+CERGEL+M++LLL+A+ASTKMVTNDTQSSCLHIAAK+NA  IV RLL+V+ ++EER   QGDT LM+ACLSAVETE S  TL ALLQP                                G+  +  +   G+  V  LG DDPRL ARNRHGHTALH A F+QSPTAVR+LLEAGADCT+ D+AG TA++ ALN++ K                  WA+LE E++ER+   LGEL+   GG
Sbjct:    4 LLEAVHRVNVQRAATLLARGADVNTTDAQGVTPLIIACERGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAEDIVLRLLEVDPTIEERATSQGDTALMVACLSAVETEASSATLNALLQP------------RLATTTGPSNKASGPPPRKTGRYASAGD---GKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIRDEAGLTAVEVALNLIKKATA---------------WAKLENEAKERQRALLGELEGGEGG 252          
BLAST of mRNA_H-paniculata_contig3106.8399.1 vs. uniprot
Match: A0A6H5K161_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K161_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 1.330e-66
Identity = 154/289 (53.29%), Postives = 182/289 (62.98%), Query Frame = 0
Query:   42 LLEAVHRVNVSRVATLLFNGADVNMTDSQGVTPLIISCERG---------------------------ELRMVNLLLEAKASTKMVTNDTQSSCLHIAAKSNAASIVERLLKVERSLEERTNCQGDTPLMLACLSAVETEESENTLAALLQPLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSRATDNHRHGRRTVEYLGQDDPRLRARNRHGHTALHIATFTQSPTAVRMLLEAGADCTVVDKAGRTAMQAALNV-VGKVRGLREGFDA-------CLKLLQER 295
            LLEAVH+VNV R A LL  GADVN TD+QGVTPLII+CERG                           EL+M++LLL+A+ASTKMVTNDTQSSCLHIAAK+NAA IV RLL+V+ ++EE+   QGDT LM+ACLSAVETE S  TL ALL+P  T                              K+ +  +   G+  V  LG DDPRL ARNRHGHTALH A F+QSPTAVR+LLEAGADCT+ DKAGRTA++ ALN+   K  GLREG          CL+LL+ER
Sbjct:    4 LLEAVHQVNVQRAAALLARGADVNTTDAQGVTPLIIACERGALCLGTSSNHAVTVTAXXXXXXPAATGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEEKATSQGDTALMVACLSAVETEASSATLNALLRPRPTSTTGPSNNATSAPPR---------------KTGSYASAGDGKAPVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIGDKAGRTAVEVALNLNKKKATGLREGARGGSAPAAECLRLLKER 277          
BLAST of mRNA_H-paniculata_contig3106.8399.1 vs. uniprot
Match: A0A7S3BLI8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BLI8_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 3.320e-5
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 0
Query:   57 LLFNGADVNMTD-SQGVTPLIISCERGELRMVNLLLEAKASTKMVTNDTQSSCLHIAAKSNAASIVERLLKVERSLEERTNCQGDTPLMLA 146
            LL  G D N  + + GVTPL ++ ERG +  V LLL+AKA+  ++TND  S  LHI+++    +++E L +   +   R   +  TPLM A
Sbjct:    3 LLKRGVDPNSKNYNSGVTPLGVAAERGHIESVQLLLQAKATVDVLTNDGLSP-LHISSQFGQDAVIEMLCQHHANPNLRCGYRDHTPLMYA 92          
BLAST of mRNA_H-paniculata_contig3106.8399.1 vs. uniprot
Match: UPI000B2F7876 (ankyrin repeat domain-containing protein n=1 Tax=Novosphingobium rosa TaxID=76978 RepID=UPI000B2F7876)

HSP 1 Score: 57.8 bits (138), Expect = 6.450e-5
Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 0
Query:   39 AMSLLEAVHRVNVSRVATLLFNGADVNMTDSQGVTPLIISCERGELRMVNLLLEAKASTKMVTNDTQSSCLHIAAKSNAASIVERLLKVERSLEERTNCQGDTPLMLACLS 149
            A  L++AV R +   V  LL  GAD ++ D +G++PL ++C+ G   +++ LL A            +  LHI A+   A++V RLL  +   +   + +G+TPLM A  S
Sbjct:   66 ATPLMQAVDRQDAPLVGLLLAAGADADLADEEGLSPLTLACQLGSETVLDRLLSAPHINLRAALPDGAGALHICARYAPATVVARLLAAKLPADA-LDSRGETPLMWAAAS 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3106.8399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LLU4_ECTSI1.260e-7355.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K161_9PHAE1.330e-6653.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3BLI8_9EUKA3.320e-538.46Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
UPI000B2F78766.450e-532.43ankyrin repeat domain-containing protein n=1 Tax=N... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 289..309
NoneNo IPR availablePFAMPF13857Ank_5coord: 222..269
e-value: 2.5E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 42..271
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 224..304
NoneNo IPR availablePANTHERPTHR24121:SF2NO MECHANORECEPTOR POTENTIAL C, ISOFORM Hcoord: 224..304
NoneNo IPR availablePANTHERPTHR24121:SF2NO MECHANORECEPTOR POTENTIAL C, ISOFORM Hcoord: 42..271
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 138..172
e-value: 820.0
score: 5.7
coord: 230..259
e-value: 0.0016
score: 27.7
coord: 104..133
e-value: 16.0
score: 14.4
coord: 37..66
e-value: 2400.0
score: 2.1
coord: 70..99
e-value: 0.3
score: 20.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 230..262
score: 12.129
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 70..102
score: 9.404
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 193..317
e-value: 6.5E-13
score: 50.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 31..192
e-value: 6.4E-23
score: 83.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 42..272
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 53..126
e-value: 1.3E-9
score: 38.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 42..271
score: 28.645

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3106contigH-paniculata_contig3106:6023..16236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3106.8399.1mRNA_H-paniculata_contig3106.8399.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3106 6022..16236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3106.8399.1 ID=prot_H-paniculata_contig3106.8399.1|Name=mRNA_H-paniculata_contig3106.8399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=851bp
PTPHGRNNLEFVSFECSGYTGPFLASWSACGGAAQSAFAMSLLEAVHRVN
VSRVATLLFNGADVNMTDSQGVTPLIISCERGELRMVNLLLEAKASTKMV
TNDTQSSCLHIAAKSNAASIVERLLKVERSLEERTNCQGDTPLMLACLSA
VETEESENTLAALLQPLDTTTTTTTTAENKATSVKRSNNNSDGSAAAAGK
SRATDNHRHGRRTVEYLGQDDPRLRARNRHGHTALHIATFTQSPTAVRML
LEAGADCTVVDKAGRTAMQAALNVVGKVRGLREGFDACLKLLQERWAELE
KESQERENLFLGELDVASGGGSALGAGKGRRSNNSDGTPVYSKKSTGNRK
KKKGKGKSLASPAAATDRDGTVVPPRELPLQQVGEATAAAQGQKLVSNST
AERSRVEGITDKTIGGGGGDGGGMQKKSSDGSSPGTSDTEGETDDETGSH
PSSEETDTATAATDDDDDGGMASGPVVKASVVVGPAAAAAATRNDAAGAA
SMGGVHEGRRVKSSSLAREKGGEIDAAAEMGAAAGVMPVGGADVSSEARA
SSEEDEEAWSIVARPSRKKKTATSAFKIAAMPALPARRVGDGVGAGAPEG
RRGQCDFGGGVSSGSNRGATIAAGERQLVPSSGGFIRKDTSAADAAARRE
SGQRRARPAQPVTLRAGPPAMATQPKRQPPVAVEATANVPIPLAQAAAAA
ASPAVSSPLPKRGSESAAVAATAEQGTDTVSRTETPDDAAAAAATTADAE
EEHKRPPNPPSQRPLNVNANTWTPPLSSMASAPAAPSSAGFVIHDQQPVA
PYAPHRPYAPQGLQHQMMNQMQVQGQQVPSFSGMPPLPRPLLQPSAGAAT
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom