mRNA_H-paniculata_contig310.8382.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig310.8382.1
Unique NamemRNA_H-paniculata_contig310.8382.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: D8LKV4_ECTSI (Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV4_ECTSI)

HSP 1 Score: 639 bits (1649), Expect = 9.040e-229
Identity = 314/401 (78.30%), Postives = 357/401 (89.03%), Query Frame = 1 
Query:   22 DDHCSPSAPPVHRLSEETGATLRERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDSEDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQGLYVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDP---DYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTEPDDDMLSLSRTLEKVL 1215
            D H     PPVHR     G  LRERRNW IF+A+ARQ+YPECL+IIEEQLR C GLAEY I+VKG I+RA+G+IQESL LFQAATCLNPQNP+NLK+VGRCLFLLGKHK AL++Y EA+++DSEDWE+WH+R LCY+HLK+FERALEAF+QANSISRHD+TFL MGKVYRLQ KP+EAL VYEEALEFSPESPELLTTVGL HLQQG+NQKAFECLGNAL+HDPR+PKAILAAGSIIQDN DMDVALVKYRV+AVQ  Y+AAVACLKRALYLDPFEWIV+YNLGLVHL+TSQYASAFHHFSA+INLKP+FAASYMYLAITLARLEDF+N+CSAY+KAL+LD    DYLTHLN+AVTL+NNDEPERA EH+ SFK +FE LDPDTE D ++L+ S+ L   L
Sbjct:    7 DSHHLRGGPPVHRPEAIEGVVLRERRNWRIFSAFARQEYPECLQIIEEQLRACNGLAEYAIHVKGQIVRAQGQIQESLVLFQAATCLNPQNPSNLKEVGRCLFLLGKHKAALDVYGEAQQIDSEDWEVWHSRGLCYMHLKQFERALEAFDQANSISRHDSTFLHMGKVYRLQDKPAEALTVYEEALEFSPESPELLTTVGLLHLQQGENQKAFECLGNALTHDPRNPKAILAAGSIIQDNQDMDVALVKYRVSAVQCKYIAAVACLKRALYLDPFEWIVAYNLGLVHLSTSQYASAFHHFSAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKALELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDTERDQEVLARSQALANSL 407
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A7S3GDF2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDF2_9EUKA)

HSP 1 Score: 497 bits (1280), Expect = 1.100e-172
Identity = 245/398 (61.56%), Postives = 316/398 (79.40%), Query Frame = 1 
Query:   79 ATLRERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDSEDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTE-PDDDMLSLSRTLEKVL 1215
            +TLRE++N  I   Y RQDY +CL++IEEQL+ECKGL EYPIYVK LI R +G+I ESL LFQAAT LNP N ANLKQVGR L+LLGKHK A+++Y+EA+K+  +DWE+WHN+ LC + LK+++ A+E+F  ANSI RHDAT++Q+GKVY LQ     A+ VY EALEFSPE+PE+LTT+GL +L+ G+N +AF+ LGNAL+HD ++PK ILAAGSIIQD+ DMDVAL+KYRVAA Q           G+       YVAA+ACLK+ALYLDPFEWI+SYNLGLVHLNT QYASAFH+FSASINLKP+F +SYMYLAITL+RL+DFEN+CSAYEKA++++ DY+  LN+++TL NN + E+A++HF  F+ LF+ELD +T+  D D+L   + L  +L
Sbjct:    9 STLREKKNALIHRLYIRQDYDDCLKVIEEQLKECKGLCEYPIYVKALIKRQRGQINESLQLFQAATVLNPHNVANLKQVGRSLYLLGKHKAAIDVYEEAQKIGIDDWEIWHNKGLCNMFLKKYKEAIESFRHANSIQRHDATYMQLGKVYTLQENYKAAIEVYLEALEFSPENPEILTTIGLLYLRLGENYRAFDFLGNALTHDAKNPKTILAAGSIIQDHSDMDVALIKYRVAATQTPNSAQLWNNIGMCFFGKQRYVAAIACLKKALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSASINLKPDFPSSYMYLAITLSRLDDFENACSAYEKAIEMESDYMFELNYSITLYNNGDVEKAKQHFVEFERLFQELDEETKNADPDVLEQRQALVMLL 406
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A6T9B7X8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9B7X8_9EUKA)

HSP 1 Score: 491 bits (1264), Expect = 2.400e-170
Identity = 245/401 (61.10%), Postives = 312/401 (77.81%), Query Frame = 1 
Query:   70 ETGATLRERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDSEDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTE-PDDDMLSLSRTLEKVL 1215
            + G TLRER NW I   Y RQDY +CL+ IE  L +C+GLAEYPIYVK LI R +G I ESL LFQAATCLNP N +NLKQVGR L+LLG+HK A+++Y+EA KL SEDWE+WHN+ LC ++LK++E A+E  ++AN I RHDATF+Q+GKVY LQ +   A+ VY EA+EFSPE+PE+LTT+GL +L+ G+N KAF+ LGN+L+HDP++PK ILAAGSIIQDN DMDVALVKYR+AAVQ           G+       +VAA+ACLKRALYLDPFEWI+SYNLGLVHLNT QYASAFH+FS SINLKP+F +SYMYLAITL+RLEDFEN+ SAYEKA++++ D+L  LN+ V L  N E ++AREHF +F+ LF +LD +++  D +++     L++ L
Sbjct:    1 QPGVTLRERVNWLIHIQYVRQDYNDCLKTIEAHLAQCRGLAEYPIYVKALIKRQRGEINESLQLFQAATCLNPHNVSNLKQVGRSLYLLGRHKAAIDVYEEALKLGSEDWEIWHNKGLCCMYLKQYEAAIECLKRANLIQRHDATFMQLGKVYTLQEQYRNAIDVYLEAIEFSPENPEILTTIGLLYLRLGENLKAFDYLGNSLTHDPKNPKTILAAGSIIQDNSDMDVALVKYRIAAVQTPNSAQLWNNIGMCFFGKQRFVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSTSINLKPDFPSSYMYLAITLSRLEDFENAYSAYEKAIEMEEDHLFELNYTVALYINGEVDKAREHFATFERLFTKLDDESKNADPEVIEQRAALQEAL 401
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A6S9RQ16_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RQ16_CHRCT)

HSP 1 Score: 487 bits (1254), Expect = 1.780e-168
Identity = 242/389 (62.21%), Postives = 303/389 (77.89%), Query Frame = 1 
Query:   91 ERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDSEDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTEPDDDMLSLSRTL 1203
            ER NW I   Y RQDY ECL+ IE+ L+E KG+ EY IYVK LI R +G IQESL LFQAATCLNP N +NLKQVGR L+LLG+H+ A+++YDEAE++  EDWE+ HNR LC+++LK++E A  AF++ANSI RHD T++Q+GKVY LQ     A+ VY EALEFSPE+P+LLTT+GL HL+ G+N KAF+ LGN+L+HDP++PK ILAAGSIIQD+ DMDVALVKYRVAAVQ           G+       YVA++ACLKRALYLDPFEWI+SYNLGLVHLNT QYASAFHHFS SINLK +FA+SYMYLAITL+RL+D EN+C+AYEKA+D++ D++  LN+A+TL NN+E ERA+EHF  F+ +F +LD +    D  +   R L
Sbjct:   17 ERHNWHIHMLYVRQDYDECLKAIEKALKESKGMCEYAIYVKALIKRQRGEIQESLQLFQAATCLNPHNISNLKQVGRSLYLLGRHRAAIDVYDEAERIGIEDWEIKHNRGLCFLYLKQYEEAANAFKKANSIQRHDNTYVQLGKVYTLQEDYRAAIEVYMEALEFSPENPDLLTTLGLLHLRLGENFKAFDYLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRYVASIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHHFSTSINLKADFASSYMYLAITLSRLDDLENACAAYEKAIDMEEDHMFELNYAITLANNEELERAKEHFAQFERIFAKLDDEARSADPEVEEMRML 405
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A8J6CHX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHX9_DIALT)

HSP 1 Score: 481 bits (1237), Expect = 4.290e-166
Identity = 235/381 (61.68%), Postives = 299/381 (78.48%), Query Frame = 1 
Query:   88 RERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDSEDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAV------------------QGLYVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTEPDD 1176
            RER NW I   Y +Q+Y  CL +IEEQL+   GL EYPIY+K LI R +G IQ+SL LFQAATCLNP N  NLKQVGR L+LLGKHK AL++Y EA +L+ EDWE+WHN+ LC ++LK++E+A++ F+QAN+I +HD T++Q+GKVY LQ     A+ VY EAL+FSP++PE+LTTVGL +L+ G+N +AF+ LGN+L+HDP++PK ILAAGSIIQD+ DMDVALVKYRVAAV                  +  YVAA+ACLKRALYLDPFEWI+SYNLGLVHLNT QYASAFH FS+SINLKP+F +SYMYLAITL+RL+DF+N+CSAYEKA++++ D+L  LNFA+TL NNDE E+A EHF  F+ L+ +LD + +  D
Sbjct:   16 RERVNWLIHVNYVQQNYDHCLALIEEQLKMHNGLCEYPIYIKALIKRQRGEIQDSLQLFQAATCLNPNNINNLKQVGRSLYLLGKHKAALDVYKEAMRLNEEDWEVWHNQGLCQMYLKQYEKAIDCFKQANAIQQHDVTYIQLGKVYTLQEDFRAAIEVYLEALDFSPDNPEMLTTVGLLYLRLGENYRAFDFLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVATPNSAQLWNNIGMCFFGKQRYVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHFFSSSINLKPDFPSSYMYLAITLSRLDDFDNACSAYEKAIEMEDDHLFELNFAITLYNNDEVEKAAEHFAKFEQLYAKLDDEAKSSD 396
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: K3WTZ6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTZ6_GLOUD)

HSP 1 Score: 473 bits (1216), Expect = 1.040e-162
Identity = 239/393 (60.81%), Postives = 309/393 (78.63%), Query Frame = 1 
Query:   97 RNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDS-EDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTE-PDDDMLSLSRTLEKVL 1215
            RNW +   Y R ++ ECLR++E+ L+  +GL+EYP+Y+K LI+R  GRIQESL LFQAATCLNP N  NLKQVGR L+LLGKH  A+E+Y+E   +   +DWE++H+  LCY++LKE+E+A++ F+ AN+I+RHDATFLQ+GKVY LQ     A+AVY EALEFSPE+PE+LTT+GL +L+ G+N +AF+ LGN+L+HDPR+PK ILAAGSIIQD+ DMDVALVKYRVAAVQ           G+       +VA+VACLKRALYLDPFEWI SYNLGLVHLNT QYASAFH FSA+INLKP+F +SYMYLAITL RL+DFEN+CSA+EKA++++ D+L HLN+A+TL NNDE ERA+  F+ F+ +FE LD +T+  D ++L   ++L  VL
Sbjct:   32 RNWYLHRLYLRSEFKECLRVVEDVLKTHQGLSEYPLYIKALILRHSGRIQESLQLFQAATCLNPDNKENLKQVGRSLYLLGKHMAAIEVYEEILTMGRVDDWEIYHSIGLCYMYLKEYEKAVDNFQHANTINRHDATFLQLGKVYTLQEDFKAAIAVYLEALEFSPENPEILTTLGLLYLRIGENFRAFDYLGNSLTHDPRNPKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVASVACLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHFFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAFEKAIEMERDHLFHLNYAITLYNNDEMERAKVQFDRFEEIFEALDDETKNADQEVLEQRQSLLNVL 424
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A067C533_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C533_SAPPC)

HSP 1 Score: 472 bits (1215), Expect = 1.280e-162
Identity = 240/379 (63.32%), Postives = 298/379 (78.63%), Query Frame = 1 
Query:   97 RNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDS-EDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTEPDD 1176
            +N+ I   Y RQ+Y ECLR+IEE L+E  GL E+PIYVK LI++  GRIQESL LFQAATCLNP+N  NLKQVGR L+LLGKHK A+E+Y+E +KL   EDWE+ HN  LCY++LK+F+ A+EAF+ AN++ RHD TFLQ+GKV+ L+     A+ VY EALEFSPESPELLTT+GL +L+ G+N +AF+ LGN+++HDPR+ K ILAAGSIIQD+ DMDVALVKYRVAAVQ           G+       +VAAVA LKRALYLDPFEWI SYNLGLVHLNT QYASAFH+FSA+INLKP+F +SYMYLAITL RL+DFEN+CSAY+KA++++ D++ HLN+A+TL NNDE ERA+  FN F+ +FE LD  T   D
Sbjct:   26 KNYLIHKLYLRQEYTECLRLIEEMLKEHHGLCEFPIYVKALILQRNGRIQESLQLFQAATCLNPENKDNLKQVGRSLYLLGKHKAAIEVYEETQKLPGLEDWEVSHNIGLCYMYLKDFDHAIEAFQHANNVHRHDTTFLQLGKVHTLRDDFKAAINVYLEALEFSPESPELLTTIGLLYLRIGENFRAFDYLGNSMTHDPRNAKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVAAVASLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHYFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAYDKAIEMEADHMFHLNYALTLFNNDELERAKVQFNKFEAIFETLDEATRSSD 404
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A7S2C5V5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5V5_9STRA)

HSP 1 Score: 472 bits (1215), Expect = 1.580e-162
Identity = 241/427 (56.44%), Postives = 315/427 (73.77%), Query Frame = 1 
Query:   46 PPVHRLSEETGATLRERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEK-----------------LDSEDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ------------------GLYVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDP-DTEPDDDMLSLSRTLEKVLT 1218
            PP+ R S     + RE++N  I A Y R ++ EC+R+IEEQL EC    EYP+YVK LI+R +G+IQESLTLFQ+ATCLNP N ANLKQVG   +LLGKHK A+++Y+EA++                 L ++DWE+WHN+ LCY+H+K+   A+E+F++ANSI RHDAT++Q+GKVY+LQ    EAL VY++A++FSPE+PELLTTVGL  L+  +N KAFE LGN+L+HDPR+ K ILAAGSIIQDN +MD AL+KYRVAAVQ                    + AAV+CLKRALYLDPFEWI+ YNLGLVHLNT QYASAFH+FSASINLK +F ASYMYLAITLARL+DF NSC+AYEKA+ ++ D++ HLN+A+TL N+ E ++AR H   FK L+ EL+  D E D ++++ S+ L++ L+
Sbjct:    2 PPMARYS-----SWREKQNAFIHACYVRHEHDECMRVIEEQLSEC-AFCEYPLYVKALILRQRGKIQESLTLFQSATCLNPNNTANLKQVGHSYYLLGKHKQAIQVYEEAQRIGEENVRKRNEVGRQARLSADDWEIWHNKGLCYIHMKQLGLAIESFQRANSIQRHDATYMQLGKVYQLQENFEEALKVYQDAIDFSPENPELLTTVGLVWLRLQENPKAFEQLGNSLTHDPRNAKTILAAGSIIQDNQEMDTALIKYRVAAVQTPNSAQLWNNIGMCFFGKAFHTAAVSCLKRALYLDPFEWIICYNLGLVHLNTGQYASAFHYFSASINLKSDFPASYMYLAITLARLKDFPNSCTAYEKAISMEQDHMNHLNYAITLYNHGEVDKARTHHGIFKQLYAELNQEDVEHDYEVMAQSQGLQEALS 422
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A812SLH6_9DINO (BBS4 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812SLH6_9DINO)

HSP 1 Score: 470 bits (1209), Expect = 7.380e-162
Identity = 230/390 (58.97%), Postives = 300/390 (76.92%), Query Frame = 1 
Query:   88 RERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDSEDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTEPDDDMLSLSRTL 1203
            RE++NW I   Y RQ++ EC+ +IEEQLRE  G+ EY IYVK LI R +G++QESL LFQAATC++P N  NLKQ+GR L+LLGKH+ A+E+YDEA+K+  EDWE+WHN+ LC+++L++++ +++ F +AN+I RHD TF+Q+GKVY LQ     A+ VY EALEFSPE  ELLTT+G+ +L+ G+N KAF+ LGNAL+HDP++ K ILAAGSIIQD+ DMDVAL+KYRVAAV            G+       YVAA+ACLKRALYLDPFEWI+SYNLGLVHLNT Q+ASAFH FSASINLKP+F +SYMYLAITL+RL+DF N+CSAYEKA+++D D++ HLNFA+TL N+ +   AR  F  F +LF++LD +    D  ++  R L
Sbjct:   13 REKKNWLINLLYVRQEFKECMDVIEEQLRESNGMCEYAIYVKALIKRQEGQVQESLQLFQAATCISPLNVYNLKQMGRSLYLLGKHRGAIEVYDEAQKISPEDWEIWHNKGLCHMYLRQYDSSIDCFTKANAIQRHDVTFMQLGKVYALQEDYKSAIDVYTEALEFSPEHAELLTTLGILYLRMGENFKAFDYLGNALTHDPKNAKTILAAGSIIQDHSDMDVALIKYRVAAVHTPNSAQLWNNIGMCFFGKTKYVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQFASAFHFFSASINLKPDFPSSYMYLAITLSRLDDFSNACSAYEKAIEMDSDHMFHLNFAITLFNHGDLTEARRQFVLFSDLFQQLDEEQRNSDPEVNEQRQL 402
[Close]
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Match: A0A485LI56_9STRA (Aste57867_21444 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LI56_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 2.980e-161
Identity = 247/405 (60.99%), Postives = 308/405 (76.05%), Query Frame = 1 
Query:   22 DDHCSP-SAPPVHRLSEETGATLRERRNWSIFAAYARQDYPECLRIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPANLKQVGRCLFLLGKHKFALELYDEAEKLDS-EDWEMWHNRALCYVHLKEFERALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESPELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDMDVALVKYRVAAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQYASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPDYLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTEPDD 1176
            DD  SP SA P HRL     A     +N+ +   Y RQ++ ECL++IEE L+E +GL EYPIYVK LIM+  GRIQESL LFQAATCLNP N  NLKQVGR L+LLGKHK A+E+Y+E +KL   EDWE+ HN  LC+++LK ++ A+E+F+ AN+I RHD T+LQ+GKV+ L+     A+ VY EALEFSPE+PELLTTVGL +L+ G+N +AF+ LGN+++HDPR+ K ILAAGSIIQD+ DMDVALVKYRVAAVQ           G+       +VAAVA LKRALYLDPFEWI SYNLGLVHLNT QYASAFH+FSA+IN+KP+F +SYMYLAITL RL+DFEN+CSAYEKA++++ D+L HLN+A+TL NNDE ERAR  F+ F+ +F+ LD  T   D
Sbjct:    5 DDSKSPLSARPAHRLEPPLTA-----KNYLLHKLYLRQEFGECLKLIEEMLKEYQGLCEYPIYVKALIMQHNGRIQESLQLFQAATCLNPDNKENLKQVGRSLYLLGKHKAAIEVYEETKKLAGPEDWEIQHNVGLCHMYLKNYDLAIESFQCANNIHRHDTTYLQLGKVHTLREDFKAAINVYLEALEFSPENPELLTTVGLLYLRIGENFRAFDYLGNSMTHDPRNAKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVAAVASLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHYFSAAINIKPDFPSSYMYLAITLGRLDDFENACSAYEKAIEMESDHLFHLNYALTLFNNDEIERARVQFDKFEAIFDALDEGTRTGD 404
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig310.8382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV4_ECTSI9.040e-22978.30Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus silicul... [more]
A0A7S3GDF2_9EUKA1.100e-17261.56Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A6T9B7X8_9EUKA2.400e-17061.10Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A6S9RQ16_CHRCT1.780e-16862.21Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A8J6CHX9_DIALT4.290e-16661.68Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
K3WTZ6_GLOUD1.040e-16260.81Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A067C533_SAPPC1.280e-16263.32Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A7S2C5V5_9STRA1.580e-16256.44Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812SLH6_9DINO7.380e-16258.97BBS4 protein n=3 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A485LI56_9STRA2.980e-16160.99Aste57867_21444 protein n=4 Tax=Aphanomyces TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig310contigH-paniculata_contig310:24531..31129 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score639.8
Seed ortholog evalue8.6e-181
Seed eggNOG ortholog2880.D8LKV4
Preferred nameBBS4
KEGG koko:K11447,ko:K16531
KEGG Pathwayko05202,map05202
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000086,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000288,GO:0000291,GO:0000785,GO:0000910,GO:0000956,GO:0001085,GO:0001103,GO:0001654,GO:0001708,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005929,GO:0006139,GO:0006325,GO:0006401,GO:0006402,GO:0006464,GO:0006482,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008217,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009933,GO:0009934,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0012505,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016569,GO:0016570,GO:0016577,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019439,GO:0019538,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031514,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0034641,GO:0034655,GO:0034708,GO:0035050,GO:0035097,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035327,GO:0035845,GO:0035869,GO:0036064,GO:0036211,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043473,GO:0043928,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044666,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045165,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046483,GO:0046530,GO:0046548,GO:0046700,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048507,GO:0048509,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051276,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0055044,GO:0055087,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0070988,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071557,GO:0071704,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090304,GO:0090596,GO:0097458,GO:0097499,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098791,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902494,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:1990234,GO:2000145
EggNOG free text desc.cellular component assembly
EggNOG OGsCOG0457@1,KOG1124@2759
Ec32 ortholog descriptionBardet-Biedl syndrome 4
Ec32 orthologEc-11_005700.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons10
Model size1221
Cds size1221
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig310.8382.1prot_H-paniculata_contig310.8382.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig310 24531..31129 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929953.2966378-CDS-H-paniculata_contig310:24530..246051622929953.2966378-CDS-H-paniculata_contig310:24530..24605Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 24531..24605 -
1691481084.4522107-CDS-H-paniculata_contig310:24530..246051691481084.4522107-CDS-H-paniculata_contig310:24530..24605Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 24531..24605 -
1622929953.3181565-CDS-H-paniculata_contig310:25098..252151622929953.3181565-CDS-H-paniculata_contig310:25098..25215Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 25099..25215 -
1691481084.4679146-CDS-H-paniculata_contig310:25098..252151691481084.4679146-CDS-H-paniculata_contig310:25098..25215Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 25099..25215 -
1622929953.353771-CDS-H-paniculata_contig310:25692..257981622929953.353771-CDS-H-paniculata_contig310:25692..25798Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 25693..25798 -
1691481084.4790628-CDS-H-paniculata_contig310:25692..257981691481084.4790628-CDS-H-paniculata_contig310:25692..25798Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 25693..25798 -
1622929953.3997157-CDS-H-paniculata_contig310:26482..266161622929953.3997157-CDS-H-paniculata_contig310:26482..26616Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 26483..26616 -
1691481084.488868-CDS-H-paniculata_contig310:26482..266161691481084.488868-CDS-H-paniculata_contig310:26482..26616Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 26483..26616 -
1622929953.4131067-CDS-H-paniculata_contig310:28078..281451622929953.4131067-CDS-H-paniculata_contig310:28078..28145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 28079..28145 -
1691481084.4978726-CDS-H-paniculata_contig310:28078..281451691481084.4978726-CDS-H-paniculata_contig310:28078..28145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 28079..28145 -
1622929953.4251225-CDS-H-paniculata_contig310:28438..285901622929953.4251225-CDS-H-paniculata_contig310:28438..28590Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 28439..28590 -
1691481084.5069418-CDS-H-paniculata_contig310:28438..285901691481084.5069418-CDS-H-paniculata_contig310:28438..28590Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 28439..28590 -
1622929953.437244-CDS-H-paniculata_contig310:28872..289201622929953.437244-CDS-H-paniculata_contig310:28872..28920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 28873..28920 -
1691481084.5163321-CDS-H-paniculata_contig310:28872..289201691481084.5163321-CDS-H-paniculata_contig310:28872..28920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 28873..28920 -
1622929953.4529164-CDS-H-paniculata_contig310:29128..292691622929953.4529164-CDS-H-paniculata_contig310:29128..29269Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 29129..29269 -
1691481084.5295813-CDS-H-paniculata_contig310:29128..292691691481084.5295813-CDS-H-paniculata_contig310:29128..29269Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 29129..29269 -
1622929953.4663663-CDS-H-paniculata_contig310:29513..296801622929953.4663663-CDS-H-paniculata_contig310:29513..29680Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 29514..29680 -
1691481084.5406327-CDS-H-paniculata_contig310:29513..296801691481084.5406327-CDS-H-paniculata_contig310:29513..29680Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 29514..29680 -
1622929953.482933-CDS-H-paniculata_contig310:30915..311291622929953.482933-CDS-H-paniculata_contig310:30915..31129Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 30916..31129 -
1691481084.5500023-CDS-H-paniculata_contig310:30915..311291691481084.5500023-CDS-H-paniculata_contig310:30915..31129Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 30916..31129 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig310.8382.1

>prot_H-paniculata_contig310.8382.1 ID=prot_H-paniculata_contig310.8382.1|Name=mRNA_H-paniculata_contig310.8382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp
MPTPRYADDHCSPSAPPVHRLSEETGATLRERRNWSIFAAYARQDYPECL
RIIEEQLRECKGLAEYPIYVKGLIMRAKGRIQESLTLFQAATCLNPQNPA
NLKQVGRCLFLLGKHKFALELYDEAEKLDSEDWEMWHNRALCYVHLKEFE
RALEAFEQANSISRHDATFLQMGKVYRLQGKPSEALAVYEEALEFSPESP
ELLTTVGLWHLQQGDNQKAFECLGNALSHDPRDPKAILAAGSIIQDNHDM
DVALVKYRVAAVQGLYVAAVACLKRALYLDPFEWIVSYNLGLVHLNTSQY
ASAFHHFSASINLKPEFAASYMYLAITLARLEDFENSCSAYEKALDLDPD
YLTHLNFAVTLVNNDEPERAREHFNSFKNLFEELDPDTEPDDDMLSLSRT
LEKVLT*
back to top

mRNA from alignment at H-paniculata_contig310:24531..31129-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig310.8382.1 ID=mRNA_H-paniculata_contig310.8382.1|Name=mRNA_H-paniculata_contig310.8382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6599bp|location=Sequence derived from alignment at H-paniculata_contig310:24531..31129- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCAACGCCCCGGTACGCGGACGACCACTGTTCTCCGTCGGCGCCGCC
CGTTCACCGCTTATCCGAAGAAACAGGCGCTACTCTGCGGGAGAGGCGGA
ACTGGTCTATCTTCGCAGCCTATGCCCGCCAAGACTACCCAGAGTGCCTG
CGGATCATCGAGGAGCAGCTGCGAGAGTGCAAGGGCCTGGCCGAGTATCC
CATTTATGTCAAAGGTATCTATGACAACGATGTGACTACCTTGCACCGCA
CGATGTTTCAGGGGTTTCTTTCGAAGGACTTCAAAAATGCCACAATTTGG
CAACCGCAGAAACCAATATCTGTGGAGAATTGAGTTCATCTGAAATAGCT
AGCGTTAGGAAAAACCTTTTTTGGTCAACCAGTACGTGATTCTTGATGCT
GAAGTTGCTGTTGACGTGAATAGTTGTGGCCAAACGAACAGACCGAAATG
GATGCACAGTGGGCCAGTTGTCAGGCGCATTTTAAAAGAGGCACCCTCGG
GTTACGCTGTATAGAATCCGCTGTACAGATTGCACCCGCCTTATTATCTA
ACATAAAGCGTAGGAACGATTTTCTTCACTGTCAGATACAGAACGGGTGG
TACATTTATGTATCCGCGAGAGAAGAAAATTGTAAGGTTCCCTTCGCCTC
TAGGGATATTACGGTCTCCCCTCCCGAAGTCTAGTCAGTTTATCTTCCCT
TTCTTTCTTCCCCAGCTTCTCCCTCCTGGAATTTTGTTGAATTGTTTGGA
GAATCAGTCACTCGCAGCATAACTTACATGAACGTACCTCTGGTTTCGAT
TGGTGTTCATGAGCATATTTCCATATTCATTTGTACTTGTACTGTAGTGC
ATGTTTCAAACCATATCTTCATGTTGTTGGCGATGCTGTCCCGTTGTTGG
AGTTGTCCTTGGCAAGGGTCGCACATGGTGCTGTCGCGGTATTAGAGTAG
CTGATATGTCGGATTCTTTCTCCTGCTTCAAGGTTGCTATTTGCCTCTTT
TGTAAGTTGCGGTATTTTTACATCAAGAGGATACCCCCTCGTCTCGCTCC
CCATGTATCTTTGTGAGACGAAATTACGATGTGCCGACTGACGGTTAGCG
TCAGACGATGAGCAGGTTAATAATTTCGGTGATAATTTCGATGTTTCCGA
GGTATGTAAGCTCATTTCAAGGTAGCGGGCGATCGTTCTAAACATCGTTA
GCTGTGCAAGGGTTGGTACGTCTCGTTGCGCTGCATGCAGACAGCTCCGT
AACCGGTTATTGTATAAAGCGTGAGATCAGTGACCACGGCATCTGCAATC
TCATCGCGTGTGTTCTTGCGTCCTTCGGGTTTTTGTACAATCACAGCTGG
CCAACAATGGTCTGCTGCTGCTGGTTCTGTTTTATCATCTTTGCAACACG
GTGATATTTTGGGGTGCCACGCATATACTTACTGTGTTCTTGGTGGCAGG
GCTAATCATGCGCGCCAAGGGTCGAATACAGGAATCTCTGACGTTGTTTC
AGGCAGCTACATGCCTCAACCCGCAAAATCCTGCCAACCTTAAGCAAGTA
GGTCGGTGTCTTTTTCTTCTCGGGAAGCACAAGTTCGCCCTTGAACTCTA
CGACGAGGCTGAAAAGGTGAGGGCGAGGGGTGGATCTGTTGACGAACTGT
GTCAATGACAGTAAGGACTGGGTTCCACCGACAATGCTTCTCGTCCGAGC
CCGGTTGGGGCCGTGCACCTTGTATCCAGCGTCACGTATGTTAAGTGCAA
TTCAATACTGTACCCAAATGTCTTTCGATCGGTAGCTGCGAACTTGGCTC
TTGATACTGCCACACTGAGTGGCGTACTCTACCTCCGCTTTCCTTTTTTC
CGGAAGGAAGCTCGATTCAGAAGATTGGGAGATGTGGCACAACCGAGCGC
TGTGCTATGTGCACCTCAAGGAGTTTGAGCGAGCGCTGGAAGCTTTCGAG
CAGGCAAACTCCATTAGCAGGCACGATGCCACATTTCTTCAGATGGGAAA
GGTAAGGAGCGAAATGGGTTGATTGGGGTCCCTTCTGCTTGATCCTTGGC
CTTTCTCTCCGTCATGAAACAACCTTACGCCGTCTTGATTTTGGTATTTC
TATGTAGCCTTTACGCCGTGTTAACTTTGGTGACCGGTCCGTTCCGAAAA
GGCATTCAAAAGATTGCCTGGACAACATGTCGCGGCTTGCACACACCGCA
AAATCGCAGGTTTACCGTTTGCAAGGCAAGCCGAGCGAAGCTTTGGCAGT
ATACGAGGTGAGACACTGTAGGTAACCTAGGTGCGGGCATTTTACGCTGT
CAGCGTCAGCTGAATTGTTCTCTTCGCTGCCAGCAGTGTCAAAGAGAGTC
GTTGAACATGCGACGACTCGATAAACAATAGTCGAAACGCACCATGGGGC
TGAGTCCGTTGAAAAGGATGTAGCTCTGGCCGCCGGGGTAGAAAACCAAA
GATAGATTCTTGCTGCGGCCCGAAGCAACAGACTAAATAATGGGAAATAT
GAACTGTTTGCCAACTTGTCTTCAATTGATCTTTCATAGGAGGCACTCGA
GTTCTCACCAGAGAGCCCGGAGCTTCTTACAACGGTTGGACTCTGGCACC
TGCAGCAGGGGGACAACCAGAAAGCGTTCGAGTGCCTGGGAAATGCGCTT
AGTCACGATCCTCGGGACCCGAAAGCGATTCTCGCGGCAGGGTGAGATCC
CGGACCTTCTGCACGCCAAAGCAGTGCTCACCAGCTGTACGCTTGTTCAA
ACATCTTTGCGGCTAAACTTAATCCGCAATCTTCGGGGCAGCAATCATAC
CACCGATCAATCTCGAATCCCACAGATTCTATAGAGAAAGGAATTACGCA
GCGTGAACTTTCAAGTTCACAGTAGGGTAAGAAGAATAGAGAAGCTTTTG
CCGCCGTCTTCTCTGCCTCTAATCTCCCTGTTTGGTCTGCCGCATATGTG
TGTTGTTTTCCCACGCTTGGTCGTTCGACGCCAGGTCAATCATCCAGGAT
AATCACGACATGGACGTGGCCCTCGTCAAATACAGGGTTGCGGCCGTACA
GGTAAGAACACCGTAAAATGTCAAGCTTTGGGCTCGCGTTTACACATCCT
GGTGGAGATCAATTGGCCCCCACGTGTTATTTTGTTACCGACCTGGATTC
CTCCTTTCCGAGCATACATATGCCATCTGTCAACCGCAAGGTTAAAAGAA
TTTTGTGTTTGTCGTCATGTACGTGAGACCAATACGCGCTGGAGCAACAA
TTTGCAACGCAACACAAGGCATTCCTCCTGCGTTCATCTCACGCATGTCC
TTATGCACGCCAGCCACACTGGAGGAGTTCAATGCAGTCTACTGATTGAA
TCCACGCTTGCTTGATCGTTTTGCCGTGATGAAAAATTCAGAAACGCCTG
TCCATCTTTGCCAATGACCCCATGTTTCTTTCCCAGACACCAAATTCTGC
CCAGCTGTGGAATAACATCGGTATGTGTTTCTTCGGAAAGGTGGGTGTGG
TTTTATAGCGACTATTTGACTCCTTGGGCGCCTGTCTCGACAGAATCGTC
ACCTGAAGAAATACGGGAAGAACAATGCCCGTCTAATGGCCAGGATTTTG
ATGGGGAAGGTAGCTGTCGTCGTTGAGGCAGTTAGTCCAGTACAGACACT
AACTACGCACAGCACAGAAAGGGAGTTGGTATGCTTCTGTGCACAACGGC
CGCAACGCTCGACACACTTTGTCACACTCAATTTCTCACGTCTGTTCAAA
ACAAGGTTGTTTTTTGTCCCATTTTTCCCATTTTCCCGTTTTCCGAAAAT
TGGAATTGCGATAGCGAGCTGAATAAATTGACTGTAACCAAAGTGGACCA
GACATATGAGGGTAACATGCCGTAGAGTATTTCGGCACTTTTCCCTCAAT
TTTGAACTCGTTATCGCAATTTCCAATTTTTCGGAAACGGAAAAGAATAT
AAATTGGACAAAAAACGACCTCGTTTAGAACGTCCCTTATCCGAAACAGG
CTTCAGCGCCCAAACGTTTACCAAGACTCGTTCAGCGCAATGTTCTGATT
CCTTCACTCCGATGAATGTTATTGCTAGAGCTCTCCTAGACCCCAAGCGT
CATCTGAGTCTAAGGCATGATGAAGGGTTGCATGCTCATGAAGCAACTTC
AGACGAGAATTTGGATGTGTTGCATACTATCGCTGAAGGGTATCTATACC
CCAAGCGAGCTCGTGCAGTAGTCTCTCGGAGGTGCCTGGCAGTGAGGTTA
ACCGTTACGATAGTACGCGCAAAACTCCTTCTGCTATGCTTGAGAACAGA
GAGGAAGAAAATGATGTTGCGTTACGGAACGTCGATTTATTCATGCTACG
AGCAGACTCTTCTTCGAACCCACCTGTCAAAAAGTGCACAAGCCATACAC
GACAAAATACTATGGAATGTGTATATGTTCACATTCACTTGACTCGGTGT
TTTCTTTTCGCCCCCCGCCCGTTACCGTGGGCCCTCTTTGCTTCTCCCCG
CCTGCAATTATAGGGTCTTTATGTGGCAGCAGTTGCGTGCTTGAAACGCG
CTTTGTACCTGGATCCATTTGAGTGGATCGTCTCTTACAACCTGGGCTTG
GTACACCTGAACACCTCGCAGTACGCCTCGGCCTTTCATCACTTCAGGTA
CTAAGGGGTTTATTTTTACTTTCAAGGGAGTTAGTTGACTTTTACTATGT
AGGACTTCCGTCCAAGTTTTTGATACGGAAAACGTTGGAAAGATGCCCGC
AGTTTTCCTTTTGGTCGCTTTTGAAAAGGACTCATCTATTCGGTTCAAAA
ATCATTGCATTCATCCCGGTTTCACTCGCCTCAGATAACGAGCAACTCAA
CGGCCTTTTCGCAGAAGACGATCGCTGTTGTTCCGCCTGAGATGCGGTAC
GATTCAAGCAGACCGTCTTACCAACCCCCCGTCCAACGTTCACTCCTTAG
GGTCTAACGTCTTTGTCACAGCCCCACCCACACTCAACACTCCTGTAATC
AACTGGATCAGGACTTGGTTTTCTTCGATGCCGCTACAAAATGCACATTG
GACCCACCACAACATGACCTATTATTGCTGTGAACTAGTCGGAACACACG
CACATCGATCGACACGGAAATACACATGGTAGGCAATTTGCATAGTATAT
CAGGGGGCAATTGAACAACGAAGTGTGTTGTGCGCTAAGGCGCCAGACGC
TACACATGTATAGGTAGAGTTATACATTCACATCCTTGCGCGGCATGGCT
CTGGTCCTTTCAACCGAACTCTGGCATAAGATAACTGTATCTCGCTCATA
CTCCTATGCACCTGCGTGCCTATCCTTTCAGTGCGTCTATTAACTTGAAG
CCGGAATTCGCAGCGTCGTACATGTACCTGGCCATAACGCTGGCCAGGTT
GGAGGATTTTGAAAATTCCTGCAGCGCCTATGAAAAGGTGCGATATCTCG
GACCTCGCCCTGAAAACGTTACTCATTAATACGAATGACTTTGGCGATGT
AATGATACGTTGAACTACCAATTACTGCTAACGTTATCGTCGAAAGTCTT
TCATGCGCTTCTTGACAGCGGGCCTCGCATGGTACAATAGTTTCTCACAG
ATAACGGCGAGCCTAGTGGATCTTGGTGTCCAAATCATACTTTGTGCACA
TCAGCATCCCGCTTCATGTGCACCGGCATCGGAACGTGTCAGACTGCAAA
CATCCACCAATAGCTCGAAATGGTTGTTTTTTCTCTGGTTCCATATCGTC
CTCTTGACTAAGAATCGTAATATAGCCTTGTTCATGTTTATCTACGGGTT
GAGACCAAATTTTTACCGTTCTCGGTGTGTCAGCTCTACTAATGTATTGT
CTGCAATTAAAATGATGAGAGCTGTCATTTTCTGCGGGTCTATCGTGCTT
CGTGAATGTCACAGGCACTGGACCTTGATCCTGACTACCTCACCCACCTA
AACTTTGCGGTAACGTTGGTCAACAACGATGAGCCTGAACGCGCCAGGGA
ACACTTCAACTCGTTTAAAAACCTCTTCGAGGTATGTATGACTCACAAGA
GTAATGCCCAAAGTTCACCGCCGAACAGAAACCTTGTTGGAGTTGTAGGG
TTGTTGGAGCTACCGCAACAGATATAGTGGAGACTCTGACAAATAATCGA
GCTTATTGTAAACGAATTCCAGCACAATGGGCTACTCATTTGTTTTCGAG
AACCATTGCGTGGCGAAAACAGCGACCATCTACTGACTGTAGAGAACATC
GCGGCATCAGTTGGAGAGGGACGTCGAACTGGTGCTGCGTTCATGGTGAC
CTGGACATCGTCTACCGACTGAGAAAATTACACGAAAAGACGACGTAGTG
ACATTCCTTCTGTAGGAGTCGTTACTCGAAAGACCCTTTTCCTACAACCA
TTGAAGCTTTCCCGTGGGAGAATGGTATGCCTTGTTTCACTCCGCTCGCC
TTCGCTCCGTTACACCTCCCATGAACCCCCTATCACCTCCTCCCTCCGCG
GTCCAACGGTGTCATCGTTTCCAGGAGCTCGATCCAGACACTGAACCTGA
CGATGACATGTTGTCGCTCAGCCGTACTCTTGAGAAGGTCTTAACTTAA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig310:24531..31129-

>mRNA_H-paniculata_contig310.8382.1 ID=mRNA_H-paniculata_contig310.8382.1|Name=mRNA_H-paniculata_contig310.8382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2442bp|location=Sequence derived from alignment at H-paniculata_contig310:24531..31129- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCAACGCCCCGGTACGCGGACGACCACTGTTCTCCGTCGGCGCCGCC
CGTTCACCGCTTATCCGAAGAAACAGGCGCTACTCTGCGGGAGAGGCGGA
ACTGGTCTATCTTCGCAGCCTATGCCCGCCAAGACTACCCAGAGTGCCTG
CGGATCATCGAGGAGCAGCTGCGAGAGTGCAAGGGCCTGGCCGAGTATCC
CATTTATGTCAAAGATGCCAACGCCCCGGTACGCGGACGACCACTGTTCT
CCGTCGGCGCCGCCCGTTCACCGCTTATCCGAAGAAACAGGCGCTACTCT
GCGGGAGAGGCGGAACTGGTCTATCTTCGCAGCCTATGCCCGCCAAGACT
ACCCAGAGTGCCTGCGGATCATCGAGGAGCAGCTGCGAGAGTGCAAGGGC
CTGGCCGAGTATCCCATTTATGTCAAAGGGCTAATCATGCGCGCCAAGGG
TCGAATACAGGAATCTCTGACGTTGTTTCAGGCAGCTACATGCCTCAACC
CGCAAAATCCTGCCAACCTTAAGCAAGTAGGTCGGTGTCTTTTTCTTCTC
GGGAAGCACAAGTTCGCCCTTGAACTCTACGACGAGGCTGAAAAGGGCTA
ATCATGCGCGCCAAGGGTCGAATACAGGAATCTCTGACGTTGTTTCAGGC
AGCTACATGCCTCAACCCGCAAAATCCTGCCAACCTTAAGCAAGTAGGTC
GGTGTCTTTTTCTTCTCGGGAAGCACAAGTTCGCCCTTGAACTCTACGAC
GAGGCTGAAAAGCTCGATTCAGAAGATTGGGAGATGTGGCACAACCGAGC
GCTGTGCTATGTGCACCTCAAGGAGTTTGAGCGAGCGCTGGAAGCTTTCG
AGCAGGCAAACTCCATTAGCAGGCACGATGCCACATTTCTTCAGATGGGA
AAGCTCGATTCAGAAGATTGGGAGATGTGGCACAACCGAGCGCTGTGCTA
TGTGCACCTCAAGGAGTTTGAGCGAGCGCTGGAAGCTTTCGAGCAGGCAA
ACTCCATTAGCAGGCACGATGCCACATTTCTTCAGATGGGAAAGGTTTAC
CGTTTGCAAGGCAAGCCGAGCGAAGCTTTGGCAGTATACGAGGTTTACCG
TTTGCAAGGCAAGCCGAGCGAAGCTTTGGCAGTATACGAGGAGGCACTCG
AGTTCTCACCAGAGAGCCCGGAGCTTCTTACAACGGTTGGACTCTGGCAC
CTGCAGCAGGGGGACAACCAGAAAGCGTTCGAGTGCCTGGGAAATGCGCT
TAGTCACGATCCTCGGGACCCGAAAGCGATTCTCGCGGCAGGGAGGCACT
CGAGTTCTCACCAGAGAGCCCGGAGCTTCTTACAACGGTTGGACTCTGGC
ACCTGCAGCAGGGGGACAACCAGAAAGCGTTCGAGTGCCTGGGAAATGCG
CTTAGTCACGATCCTCGGGACCCGAAAGCGATTCTCGCGGCAGGGTCAAT
CATCCAGGATAATCACGACATGGACGTGGCCCTCGTCAAATACAGGGTTG
CGGCCGTACAGGTCAATCATCCAGGATAATCACGACATGGACGTGGCCCT
CGTCAAATACAGGGTTGCGGCCGTACAGGGTCTTTATGTGGCAGCAGTTG
CGTGCTTGAAACGCGCTTTGTACCTGGATCCATTTGAGTGGATCGTCTCT
TACAACCTGGGCTTGGTACACCTGAACACCTCGCAGTACGCCTCGGCCTT
TCATCACTTCAGGGTCTTTATGTGGCAGCAGTTGCGTGCTTGAAACGCGC
TTTGTACCTGGATCCATTTGAGTGGATCGTCTCTTACAACCTGGGCTTGG
TACACCTGAACACCTCGCAGTACGCCTCGGCCTTTCATCACTTCAGTGCG
TCTATTAACTTGAAGCCGGAATTCGCAGCGTCGTACATGTACCTGGCCAT
AACGCTGGCCAGGTTGGAGGATTTTGAAAATTCCTGCAGCGCCTATGAAA
AGTGCGTCTATTAACTTGAAGCCGGAATTCGCAGCGTCGTACATGTACCT
GGCCATAACGCTGGCCAGGTTGGAGGATTTTGAAAATTCCTGCAGCGCCT
ATGAAAAGGCACTGGACCTTGATCCTGACTACCTCACCCACCTAAACTTT
GCGGTAACGTTGGTCAACAACGATGAGCCTGAACGCGCCAGGGAACACTT
CAACTCGTTTAAAAACCTCTTCGAGGCACTGGACCTTGATCCTGACTACC
TCACCCACCTAAACTTTGCGGTAACGTTGGTCAACAACGATGAGCCTGAA
CGCGCCAGGGAACACTTCAACTCGTTTAAAAACCTCTTCGAGGAGCTCGA
TCCAGACACTGAACCTGACGATGACATGTTGTCGCTCAGCCGTACTCTTG
AGAAGGTCTTAACTTAAGAGCTCGATCCAGACACTGAACCTGACGATGAC
ATGTTGTCGCTCAGCCGTACTCTTGAGAAGGTCTTAACTTAA
back to top