mRNA_H-paniculata_contig31.8380.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig31.8380.1
Unique NamemRNA_H-paniculata_contig31.8380.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 8.750e-95
Identity = 161/207 (77.78%), Postives = 179/207 (86.47%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRG--FAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAKDTEEEV 615
            NATV+M  +DQALI+RVFS+T+ L+REAMQHFV QL+QVSQ EIPQLF RR        RQEG  +KGG AKPRV+SMQKLVEVA LNM++RSRIEWAS+WG+LADHFGTVG ISG+ SVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATI+R S E  +RELVVSCLNNVIL KG L+RSGWKTVL VLRSAA DT+EEV
Sbjct: 1265 NATVVMAQIDQALIDRVFSATQLLNREAMQHFVEQLIQVSQSEIPQLFGRRASTLGNYQRQEGV-LKGGAAKPRVFSMQKLVEVAHLNMDIRSRIEWASLWGILADHFGTVGSISGNSSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIVRTSRETAVRELVVSCLNNVILTKGTLLRSGWKTVLTVLRSAAADTQEEV 1470          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A6H5KJ76_9PHAE (DUF1981 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ76_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 7.940e-63
Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 1
Query:  226 MQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAKDTEEEV 615
            MQKLVEVA LNM++RSRIEWAS+WG+LADHF TVG ISG+ SVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATI+R S E  +RELVVSCLNNVIL KG ++RSGWKTVL VLRSAA DT+EEV
Sbjct:    1 MQKLVEVAHLNMDIRSRIEWASLWGILADHFATVGSISGNSSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIVRTSREPAVRELVVSCLNNVILTKGTMLRSGWKTVLTVLRSAAADTQEEV 130          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A835ZB96_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB96_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.110e-55
Identity = 104/201 (51.74%), Postives = 133/201 (66.17%), Query Frame = 1
Query:   13 LMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAKDTEEEV 615
            L+  +D   ++RV++S+  LDR ++  FV QLV+VS+ EI                          PRV+S+Q+LVEVAD NM++RSRI+WASMWG +A H   VGC+ G+ +VAMY +DCLRQLALKFL K+ELRDFNFQR FLGPF  I+R S     RELV  CL+NVI A+   IRSGWKT+L VL  AA+D EE +
Sbjct:  438 LLAEIDHLGVDRVYASSARLDRGSLHCFVQQLVEVSRNEI---------------------AARPAPRVFSLQRLVEVADYNMDIRSRIDWASMWGDIAGHLAAVGCMPGNSAVAMYAIDCLRQLALKFLTKEELRDFNFQREFLGPFEDIMRRSQHAPTRELVARCLDNVIAARAANIRSGWKTLLTVLTLAARDPEEAI 617          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A7S2S9F0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9F0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.260e-51
Identity = 93/205 (45.37%), Postives = 132/205 (64.39%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAKDTEEEV 615
            NA  +MG VD  +IER+FSS+  L  + +Q  V QL QVS+ E+    + R            I+   ++PR++ +QKLVEVAD NM VR R+ WAS+W +LADHF  V C   + +VAMY VD LRQL+LKFL K+E+  FNFQR FL PF  I+++++  + RE V+S +NN++LA+ P +RSGWK++  V  +A    EE +
Sbjct:   13 NAEQVMGQVDTVVIERIFSSSTRLSAQGIQDLVHQLCQVSRKELQSSSSYRSKH---------IQADMSQPRIFCLQKLVEVADYNMAVRGRVVWASIWEMLADHFTRVAC-GENQAVAMYAVDSLRQLSLKFLGKEEMVGFNFQRRFLKPFEVIMQHNTAPETREFVLSSINNLLLARAPNVRSGWKSIFHVFSTAGMLREEAI 207          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A4D9CUH3_9STRA (SEC7 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUH3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 5.690e-51
Identity = 99/212 (46.70%), Postives = 140/212 (66.04%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGI---------KGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAKDTEE 609
            NA  +MGA+D A+IERVF+++  LD +A+Q+FV QL +VS++E+         AP     GGG          K    +PRV+S+QKLVEVAD NM  RSR+ WA++W VL+ H+  VG +  + +VAMY +D LRQL++KFL K+ELRDFNFQR+FL PF  I+  S  ++IREL++ CL+N+I  +   IRSGW+++  V   AA   +E
Sbjct: 1151 NAEQIMGAIDAAMIERVFTTSVALDSQAIQYFVLQLCEVSKMEV-------AVAPTAHHGGGGAYRPSQDLLGKETALQPRVFSLQKLVEVADFNMAARSRLVWANVWEVLSRHYAAVG-LHDNVAVAMYAIDSLRQLSMKFLAKEELRDFNFQRLFLKPFEVIMATSRSIEIRELILRCLDNLISVRAHNIRSGWRSMFAVFSLAASSPDE 1354          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A1V9ZTE7_9STRA (Brefeldin A-inhibited guanine nucleotide-exchange protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTE7_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.940e-50
Identity = 99/199 (49.75%), Postives = 136/199 (68.34%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAK 597
            NA  +   +D   ++RVFSS+ HL   A+Q F+ QL  VS  E   +  R   +  + Q         A PRV+S+QKLVEVAD+NM+VRSR+ WA+MW VL+ HF T+GC   + S+AMY +D L+QL++KFL+KDELRDFNFQR+FL PF  I+ N+  ++IRELV+SC+ N+IL +   I+SGWKT+  VLR AA+
Sbjct: 1024 NAARVNAEIDPLQVDRVFSSSVHLSNAAIQEFLLQLCVVSLTECAGVSGRVVSSRNMSQN--------AAPRVFSLQKLVEVADMNMHVRSRVVWAAMWKVLSRHFTTIGC-DDNLSIAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLTPFEIIMANAMSMEIRELVLSCVQNMILGRVRNIKSGWKTIWGVLRVAAE 1213          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A024GKN5_9STRA (SEC7 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKN5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.970e-50
Identity = 96/199 (48.24%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAK 597
            NA  ++  +D    +RVFSS+ HL+  A+Q F+ QL  VS  E   +   R   P    +       ++ PRVY +QKLVEVAD+NM+ RSR+ WASMW VL+ HF T+GC     SVAMY +D L+QL++KFL+++EL+DFNFQR+FL PF  ++ N+S ++IRELV+ C+ N+ILA+   I+SGWKT+  VLR AA+
Sbjct: 1050 NAARILEEIDSLATDRVFSSSMHLNDTAVQEFIQQLCVVSLSECSGISNNRVAIPPRNTDSNINSQFSSFPRVYCLQKLVEVADMNMHTRSRVVWASMWKVLSRHFTTIGCHENL-SVAMYAIDSLKQLSMKFLEREELKDFNFQRLFLTPFEVVMANASNLEIRELVLRCVENMILARVGNIKSGWKTIWAVLRVAAE 1247          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: F0WM19_9STRA (Brefeldin Ainhibited guanine nucleotideexchange protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM19_9STRA)

HSP 1 Score: 183 bits (464), Expect = 9.030e-50
Identity = 97/199 (48.74%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAK 597
            NAT ++  +D    +RVFSS+ HL+ +A+Q F+ QL  VS  E   +   R   P            ++ PRVY +QKLVEVAD+NM+ RSR+ W SMW VL+ HF T+GC     SVAMY +D L+QL++KFL+++EL+DFNFQR+FL PF  I+ N+S ++IRELV+ C+ N+ILA+   I+SGWKT+  VLR AA+
Sbjct:  783 NATRILQEIDALASDRVFSSSMHLNDKAVQEFIQQLCVVSLSECSGISNNRVAIP-----NADPNASSSFPRVYCLQKLVEVADMNMHTRSRVVWDSMWKVLSRHFTTIGCHENL-SVAMYAIDSLKQLSMKFLEREELKDFNFQRLFLTPFEIIMANASSLEIRELVLRCVENMILARVGNIKSGWKTIWAVLRVAAE 975          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A024U0E2_9STRA (SEC7 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0E2_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.290e-49
Identity = 100/199 (50.25%), Postives = 137/199 (68.84%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAK 597
            NA  +   +D    +RVFS++R+L   ++Q FV QL  VS  E   L    G    +R         TA PRV+S+QKLVEVAD+NM+VRSR+ WASMW VL+ HF T+GC   +  +AMY +D L+QL++KFL+KDELRDFNFQR+FL PF  I+ N+  V+IRELV+SC++N+I+++   I+SGWKT+  VLR AA+
Sbjct:  972 NAQRIADQIDGLASDRVFSNSRYLTDASVQEFVQQLCIVSLSECQGL---TGSGMTVRMAAVA----TALPRVFSLQKLVEVADMNMHVRSRVVWASMWNVLSRHFTTIGC-HDNLGLAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLTPFEIIMGNAVSVEIRELVLSCVHNMIMSRVDSIKSGWKTIWGVLRVAAE 1162          
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Match: A0A067CB14_SAPPC (SEC7 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CB14_SAPPC)

HSP 1 Score: 182 bits (461), Expect = 2.300e-49
Identity = 97/199 (48.74%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    1 NATVLMGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAPLLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADHFGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIIRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAK 597
            NA  +   +D   ++RVFSS+ HL   A+Q F+ QL  VS  E   +  R   +  + Q        +A PRV+S+QKLVEVAD+NM+ RSR+ WA+MW VL+ HF  +GC   + S+AMY +D L+QL++KFL+KDELRDFNFQR+FL PF  I+ N+  ++IRELV+SC+ N+IL +   I+SGWKT+  VLR AA+
Sbjct: 1025 NAARVTAEIDPLQVDRVFSSSVHLSNAAIQEFLLQLCVVSLTECAGVSGRVLSSRDMNQ--------SAAPRVFSLQKLVEVADMNMHARSRVVWAAMWKVLSRHFTAIGC-DDNLSIAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLTPFEIIMANAMSMEIRELVLSCVQNMILGRVRNIKSGWKTIWGVLRVAAE 1214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31.8380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFA1_ECTSI8.750e-9577.78BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax... [more]
A0A6H5KJ76_9PHAE7.940e-6383.08DUF1981 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZB96_9STRA1.110e-5551.74SEC7 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2S9F0_9STRA3.260e-5145.37Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A4D9CUH3_9STRA5.690e-5146.70SEC7 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A1V9ZTE7_9STRA1.940e-5049.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
A0A024GKN5_9STRA1.970e-5048.24SEC7 domain-containing protein n=1 Tax=Albugo cand... [more]
F0WM19_9STRA9.030e-5048.74Brefeldin Ainhibited guanine nucleotideexchange pr... [more]
A0A024U0E2_9STRA2.290e-4950.25SEC7 domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A067CB14_SAPPC2.300e-4948.74SEC7 domain-containing protein n=2 Tax=Saprolegnia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31contigH-paniculata_contig31:64086..67764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.8
Seed ortholog evalue3.8e-81
Seed eggNOG ortholog2880.D8LFA1
KEGG koko:K18442
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of ARF protein signal transduction
EggNOG OGsCOG5307@1,KOG0929@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons5
Model size615
Cds size600
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31.8380.1prot_H-paniculata_contig31.8380.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig31 64101..67764 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929952.6325693-UTR-H-paniculata_contig31:64085..641001622929952.6325693-UTR-H-paniculata_contig31:64085..64100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31 64086..64100 +
1691481084.0938492-UTR-H-paniculata_contig31:64085..641001691481084.0938492-UTR-H-paniculata_contig31:64085..64100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31 64086..64100 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929952.6458232-CDS-H-paniculata_contig31:64100..641991622929952.6458232-CDS-H-paniculata_contig31:64100..64199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 64101..64199 +
1691481084.106608-CDS-H-paniculata_contig31:64100..641991691481084.106608-CDS-H-paniculata_contig31:64100..64199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 64101..64199 +
1622929952.6605914-CDS-H-paniculata_contig31:64551..646801622929952.6605914-CDS-H-paniculata_contig31:64551..64680Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 64552..64680 +
1691481084.116412-CDS-H-paniculata_contig31:64551..646801691481084.116412-CDS-H-paniculata_contig31:64551..64680Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 64552..64680 +
1622929952.6739464-CDS-H-paniculata_contig31:66193..663581622929952.6739464-CDS-H-paniculata_contig31:66193..66358Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 66194..66358 +
1691481084.1273947-CDS-H-paniculata_contig31:66193..663581691481084.1273947-CDS-H-paniculata_contig31:66193..66358Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 66194..66358 +
1622929952.6871352-CDS-H-paniculata_contig31:66891..669921622929952.6871352-CDS-H-paniculata_contig31:66891..66992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 66892..66992 +
1691481084.1346903-CDS-H-paniculata_contig31:66891..669921691481084.1346903-CDS-H-paniculata_contig31:66891..66992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 66892..66992 +
1622929952.6996107-CDS-H-paniculata_contig31:67658..677641622929952.6996107-CDS-H-paniculata_contig31:67658..67764Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 67659..67764 +
1691481084.1425197-CDS-H-paniculata_contig31:67658..677641691481084.1425197-CDS-H-paniculata_contig31:67658..67764Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31 67659..67764 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig31.8380.1

>prot_H-paniculata_contig31.8380.1 ID=prot_H-paniculata_contig31.8380.1|Name=mRNA_H-paniculata_contig31.8380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp
MGAVDQALIERVFSSTRHLDREAMQHFVTQLVQVSQLEIPQLFARRGFAP
LLRQEGGGIKGGTAKPRVYSMQKLVEVADLNMNVRSRIEWASMWGVLADH
FGTVGCISGSPSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATI
IRNSSEVQIRELVVSCLNNVILAKGPLIRSGWKTVLRVLRSAAKDTEEEV
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mRNA from alignment at H-paniculata_contig31:64086..67764+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig31.8380.1 ID=mRNA_H-paniculata_contig31.8380.1|Name=mRNA_H-paniculata_contig31.8380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3679bp|location=Sequence derived from alignment at H-paniculata_contig31:64086..67764+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACGCGACCGTATTGATGGGCGCGGTCGACCAAGCCTTGATCGAGCGAGT GTTCAGCTCCACGCGCCACCTCGACCGGGAGGCGATGCAGCACTTCGTTA CGCAACTCGTGCAGGTACGGGGCGAAGCGAGGGGGGTATGGTGGCGGGGG ACGAGGACGGGGAGGGGAGACTGGGGAGATGGGGCCGGAGGGGGTAATCG TGTTTTGCACGCCGTAGTTGCTAGGCCATTGACCATGCGTCCTGCAGAGG ATGGGGATGTGTTCCCATGAGGGCGATTTCCGATAGCTAGTCGCTCTTTC TCAAGTTGCGAAACGGGAGGGAGGGGATAAGTGGCATACGACAATCTGGA TCGCATGTAAGCACGAGTGAACCTTCGTTGTTTTCCCGGCCTGTTTATTT GCTGAGGCCGTGGATTCTCCACTTGGTGGCCCTTGTTCGTCTGTCCTTGT TGTTCTATCTTGTCAGGTATCTCAGTTAGAAATCCCGCAGCTCTTCGCCC GACGAGGGTTTGCACCTTTATTGCGTCAGGAAGGAGGCGGGATTAAGGGC GGAACGGCCAAGCCAAGGGTGTACTCAATGCAAAAACTCGTCGAGGTGCG CCGTGTAATGGTGGGAGAGGGAGACGGGGGTTACTACTCCACCCACGAGC ACATTTGGTTTTAACGCCGAACAACTCGATCCTCCTCCCCCCCCCCACAA TCAGTCAGAGAAGAACAAGGACTGAGAAGAGAAGCTGCGAGTACAGTACG TCTGGAAGTATATCAAAACTGAATGAAGGGATTGTGTTGAAGGGATCCCT ACATGGACTATTAGATGCAAATTTAGAACGGGGGATGTTGACCTTAAGGA ATGTAGGAAACAATTCAGGAAAGACGAGACGACGATGAGATCTTCAAGTA CGACTGCGGTAGTGCGTACGAGGACCGATACATATATAGACATGCTCGCA GGACATTGGTTATCGAGAGAAATCGAACCCCCTCCGCATGGTGTTTGATT GTTGCTGACGAATGTAAGTATACTATTAATAGGAGACGTACCCGTGATTA TGGGCTGAACAACCCCAGCATGCTCTGTATGTACTACGTATGATGTGCAT AAGTACATGCGTGAGGGTACAGCATGATTTCTGTTATCCAAGACAGTGGA TGGAACTAAAGTCTCGAATTTCCCCCCCACTATTTACTGTACTGTACACT GTTGTACTCATGTTACGACCAGGGTAATTAAATTCCACACCAGCGAAGAT AATGATTCCGTCGTGATGTCACGTGTGTGGGCGTACTACAGAGTTGCCCC CCTATATTAAAAATAGAAGGGAGTTCATATGATGAATGAATCGGGGAAAA TCGAAGGACGTGGTAGAGGGCCGTTTGAATCCTGGGATTATGAAGAACAG GCGATATCGGTCCTAGGATGTAACAATCGGCCTGAAAAGGCGAGGGTTGA CGTAACAAGGCCAAGTAAAATATTTTTGAGCTCCATTTGGCAACCGAAGA GAGAGCGACTGGCCATCGAAAATCGATCTGATAGGAACCACGCTCCGTTC TCTCTAGGGCACCTTGTGCATGATCCGACAAGTACAGCATGCAACGCATG AGTACGTCCTCCGCCCCTAGTCCTTGTAAGTTTGCTGATGAGTATGTTGA GCGATTATTTTTGGCTACGTATCGTCAGCCTGTACCTTTTAATATTGAGG ATTAGGGATTGAAATTAGAGAAAACGGGTTGATCGGTAAAAAAAGGTCCA TGAGTTGGATTTGTGTGCGGGTAAGGTGTTTACTTCGAGGTCGTAACGCC TATGCACACTACATGTACGAAATATACGGGTATACTACTTGGTAACTCCC CCCGCCTCCCCTCCCGCGCGCTTCTTCGCCCCCTCATCAATCCCTGAATC AGGATGGGCTACCGACGCTGTCACGTAGCACTGCCGCCGTCGGTCGTTGT CGTACCTTCTGGCGCCACATTCCACAGCACTGACCGGCTATACTATTAAT ACCTGTCCACGGCAGCATATTTCGCAAGCTCTCCTTTTCGTCTTTGTCGT TCAGATCGTCGTTTGTCGTATCCACGCTATTTTTGCTGTTTTTCGGGTAT GTACATAGGTGGCCGACTTGAACATGAACGTTCGCAGTCGCATCGAGTGG GCGAGCATGTGGGGCGTGTTGGCGGATCACTTCGGGACGGTAGGGTGCAT CTCTGGGAGCCCTTCGGTAGCGATGTATACCGTCGATTGCCTGAGACAGC TCGCGCTCAAGTTTTTGGACAAGGTGTGCTTTGGTGTGTCCACTACTGTT AATCTTCATGCGTACAATAATATAACGGCCCATCGCGTGTACAGTGTGAA AGTGATGAAACTTGGAGACCGCACGTGAAGGGCTATCGTTTGCCAGTCAC ATGCAGAGCGACCCCCCCCCCCTCCCCACCCCCATGCCTCGCCCTTAGTA ACGTCATGTTGCATCAACTCAAAGATCGAACATGCGTAATTGTCCAGATG TTTCCGTAGGTAGTAGCCCCCGTGACGGCTCGGAGGGTTTGTTTGGATTT CGATTCACCCGATGAAAGGATTTTACGTGATGCAGTGGAAGCCCCGGACG CGAGATGTACGAGGTATTCTATCGACTGGCGTCACACGACTATCCCTTTC TCCTCATTCCCTCTCTCTTAGTTTTTTCCTTTTATTTTTTTTTCTTTGCG CTCTCGCCGGAATGGTATGGTTTGTCTCGCGTCTCGTCCTCACTGTGTTT TCTTCTCTTCGGGTCGATCGGCCGTGACTACGTATGATTTTGTTATTCTT CAAAAGGATGAGCTCCGAGATTTCAACTTCCAGAGAGTCTTCCTAGGACC GTTCGCCACCATCATCCGCAACAGTTCAGAGGTTCAAATACGGGAGCTCG TCGTGAGGTAAGCGACACAAGAAAAGTGTTGAACATTGCGTTTCCGTTTA CCTTTCCTGCCAGCACATTGAGCACCTCCTCCATGCAGCAGTACTGAGAA GGTTTGAGTCCCACACCCCGGCTTCCATGTAGTACGGTGCCGATATGTTG TTGATGGTGAAAGGCTAATCACGCGTACTCCTCATCGTTTCATCACCCCC CCAGCGAGCACTAACATTTATTCTATCCCGCAATAGCATGATTCCAGGTC GTTGACAAATTTGCGCCTCGCGGACGGATCCGAACAACACTTGGAGCATT CACGACGAAAGTCGAAAAATATTTGCCCGGGTTTCAGAATGTGCGGGCTC CTTGAAAAAGTGTCGACCTCCGGTTACTTCGTTGTTCTATCATTCAGGGC ACTTGTAGATGGTCGGGGACACATAGAATAAACATGCTATAAGCGGCCGA GGTCAAGTGCTGCAATGGCACCCTCTCAAGCTTCCAAGTGCTGTAGTGGA GGTCACATGGACTGATCACGTCCTGATTTCATCCGTGTCGTGTGCTTCAA CTGCTCATTTTTCTAGATATTCTCACACTATCGTGGCCTGTTTTAAGCCC TCCTTCCCCACGCTCCCGCCGCCATCACCGCCGCCGGTCTCTAACCCTAA CTATGCTGTTGCTGGTACGGCAGTTGTTTAAATAACGTGATCCTGGCGAA GGGGCCTCTAATTCGTTCCGGGTGGAAGACGGTGTTAAGGGTACTAAGGT CGGCGGCAAAGGACACTGAGGAAGAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig31:64086..67764+

>mRNA_H-paniculata_contig31.8380.1 ID=mRNA_H-paniculata_contig31.8380.1|Name=mRNA_H-paniculata_contig31.8380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1200bp|location=Sequence derived from alignment at H-paniculata_contig31:64086..67764+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGCGGTCGACCAAGCCTTGATCGAGCGAGTGTTCAGCTCCACGCG
CCACCTCGACCGGGAGGCGATGCAGCACTTCGTTACGCAACTCGTGCAGA
TGGGCGCGGTCGACCAAGCCTTGATCGAGCGAGTGTTCAGCTCCACGCGC
CACCTCGACCGGGAGGCGATGCAGCACTTCGTTACGCAACTCGTGCAGGT
ATCTCAGTTAGAAATCCCGCAGCTCTTCGCCCGACGAGGGTTTGCACCTT
TATTGCGTCAGGAAGGAGGCGGGATTAAGGGCGGAACGGCCAAGCCAAGG
GTGTACTCAATGCAAAAACTCGTCGAGGTATCTCAGTTAGAAATCCCGCA
GCTCTTCGCCCGACGAGGGTTTGCACCTTTATTGCGTCAGGAAGGAGGCG
GGATTAAGGGCGGAACGGCCAAGCCAAGGGTGTACTCAATGCAAAAACTC
GTCGAGGTGGCCGACTTGAACATGAACGTTCGCAGTCGCATCGAGTGGGC
GAGCATGTGGGGCGTGTTGGCGGATCACTTCGGGACGGTAGGGTGCATCT
CTGGGAGCCCTTCGGTAGCGATGTATACCGTCGATTGCCTGAGACAGCTC
GCGCTCAAGTTTTTGGACAAGGTGGCCGACTTGAACATGAACGTTCGCAG
TCGCATCGAGTGGGCGAGCATGTGGGGCGTGTTGGCGGATCACTTCGGGA
CGGTAGGGTGCATCTCTGGGAGCCCTTCGGTAGCGATGTATACCGTCGAT
TGCCTGAGACAGCTCGCGCTCAAGTTTTTGGACAAGGATGAGCTCCGAGA
TTTCAACTTCCAGAGAGTCTTCCTAGGACCGTTCGCCACCATCATCCGCA
ACAGTTCAGAGGTTCAAATACGGGAGCTCGTCGTGAGGATGAGCTCCGAG
ATTTCAACTTCCAGAGAGTCTTCCTAGGACCGTTCGCCACCATCATCCGC
AACAGTTCAGAGGTTCAAATACGGGAGCTCGTCGTGAGTTGTTTAAATAA
CGTGATCCTGGCGAAGGGGCCTCTAATTCGTTCCGGGTGGAAGACGGTGT
TAAGGGTACTAAGGTCGGCGGCAAAGGACACTGAGGAAGAGGTGTTGTTT
AAATAACGTGATCCTGGCGAAGGGGCCTCTAATTCGTTCCGGGTGGAAGA
CGGTGTTAAGGGTACTAAGGTCGGCGGCAAAGGACACTGAGGAAGAGGTG
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