prot_H-paniculata_contig3088.8355.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3088.8355.1
Unique Nameprot_H-paniculata_contig3088.8355.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length966
Homology
BLAST of mRNA_H-paniculata_contig3088.8355.1 vs. uniprot
Match: D7FNF4_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNF4_ECTSI)

HSP 1 Score: 783 bits (2022), Expect = 1.590e-268
Identity = 515/947 (54.38%), Postives = 610/947 (64.41%), Query Frame = 0
Query:   12 ALPLVLLVVGVGPLDAMKWPFSVTQPPVPQQVKVSFDDESFSFWDPFKHTGFNASSVLVPAVEEAGRRAPGYIAYAGFATALKLFLPPNALTALNVIYVAGALARPHRD-VEAFCKNEGTLLLLSPPIHVALMGSVLRATRFRTWRRLFVKATLFRLRYQLLFRRMYRPRWVTTGPSSMTLIVKDTAAAARSVQGLFPGLCSQTALLAGGCRLPYWPDCIPPPRVEKGWRKFRRLDRGLKREFGKRARRVRPGDGRRHGVGILGWRIPHKIVFGTVRMVGGLLSDPASRAKRSTRKRRGGRKGRDRTRSHNSRLVQLEGSDGGQEGEATVELLKEVEDK----------------NEXXXXXPTESQSPRAPILLGHTLNFPVEGPLIRLHNVTAIASVGSTLTKSYRALAELPFGDA------DEFAAWSSLCSPSTSSSSNGVAVATEISKEAKLPGW-TAADPEDIEVDNETDKQHSAVVGPPSXXXXXXXXXASLQPVIIKRNVPRQLKLSADDIAAAQKALRRMTYRSELDLDLSGVMAEVAAAVAKAGDLRVEASSIEMVRANLARAGMLGSAVVVPQVMSCPELGRLARRGLLVTTALRGVDVSDARVMDHAAARGEKERGRFVDGLFAVFGQMCLADGCFPSNPMPDNLLYMYSGQVGLTDLSAVCQLTEEQRRALCRLYRTMAELKNEDATNPSAAAESKARAVMEGVGFVIDLPPAGGIARTSTYYAESRGGASALSPSSLRKKSWTQEEVMDAVAAAGEATLDVSLGNDAEAAGSPDGGEDDXXXXXXXXXXXXXXXXXXERDNVEMENEXXXKGEDXXXXXXXXXXXXXXXXXXXXXXXXLMVARAPLTHVLLLRGLFDTQRDEALDLLGGGCVELMRGMAVRRLPRAMVPVLRMVANLRGVCAHLDVDKSLLPQFSRAASKGLSWRLALSSSRG 934
            +L LVLL      +DA KW F    P   ++VKVSFDDESFSFWDPFK+ GFN +  + P  EE GRRAPGY AYA  +TAL LFLPP  +TA+NV YVA A+AR H   VE FC++EG LLL  P +H+A  G+ LRA RFR WRRLFV+ATLFRLRYQL F R+YRPRWV  G S + LIV+DTA AARSVQGL P LC Q A +AGGCRL YW +C PPPRVEKGW   RR+DR L+RE G RA+R RP      GVG+LGWRIPH++V GT+R V      PA+R +    KR  GR           RLV  EG + G +G     +++EV ++                +       T  +  R   L+      P EGPL+R HNVT IAS GSTLT+SYRALAELP+GD       D F+ W +           GV             GW +A D  D + D E   +  +   P S         A+LQPV+IKRNV RQL L+ DD+AAA+K LRR+T+R+E+DLD+SGV+A VAAAV++A DLR EA SIE VR+NL +AGMLGS V VP+V+SCPELG LAR+G+LVTTALRGVDVSD+ VM HAA  GEKERGRF+DG+F  FGQMCLADGCFPSNP+P+NLLYMYSGQVGLTDLS+V QL E QRRALCRLY T+A+L+ EDA NPS AAE KARA ME VG VIDLPPAG                                                                   XXXXXXXXXXXXXXXXX   + E+  E     E         XXXXXXXXXXXXXXXX     APLT+V+LLRGLFDT+RDEAL L+GGG +EL++GMAVRRLP+AMVPVL+MVANLRG+CAHLDVD+S+LP+FS+AASKGLSWR  L+SSRG
Sbjct:   10 SLALVLLAKACH-VDASKWKFGAQAPATKKRVKVSFDDESFSFWDPFKNKGFNLTRAVGPIAEEVGRRAPGYAAYAAASTALGLFLPPKVMTAVNVAYVAAAVARSHEGGVETFCRDEGRLLLGMPSLHLAAAGTALRAARFRFWRRLFVRATLFRLRYQLRFMRIYRPRWVIRGGSPLGLIVQDTADAARSVQGLVPDLCRQAAFIAGGCRLAYWSECNPPPRVEKGWFVLRRVDRRLRRELGPRAQRARPV-----GVGLLGWRIPHRVVLGTLRFV---FRSPAARREN---KRISGRA---------PRLVGAEGHEQG-DGSGGGVVVEEVGEEYSTVLYGDAGALAAGSDRDGVEDGTRRRGGRKEALMPE--GIPAEGPLVRFHNVTTIASRGSTLTRSYRALAELPYGDGQVDPEGDSFSLWYAKLQ-------RGVPAGG---------GWGSAGDGGDRDEDEEVLARMESTPTP-SAVAAAARKAATLQPVVIKRNVRRQLMLAEDDLAAARKVLRRLTFRAEIDLDMSGVLAAVAAAVSRAADLRTEARSIEKVRSNLFKAGMLGSVVGVPEVLSCPELGALARKGILVTTALRGVDVSDSYVMQHAAPGGEKERGRFLDGVFRAFGQMCLADGCFPSNPLPENLLYMYSGQVGLTDLSSVTQLAESQRRALCRLYHTLADLRREDAVNPSEAAELKARAAMESVGLVIDLPPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXXXXXXXEGHWEVGAEADEGKE---------XXXXXXXXXXXXXXXXXXXXSAPLTYVMLLRGLFDTRRDEALALVGGGGMELLKGMAVRRLPQAMVPVLKMVANLRGLCAHLDVDESILPRFSQAASKGLSWRKRLASSRG 889          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3088.8355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNF4_ECTSI1.590e-26854.38ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 336..356
NoneNo IPR availableCOILSCoilCoilcoord: 791..813
NoneNo IPR availablePANTHERPTHR43173:SF12AARF DOMAIN-CONTAINING KINASE 1coord: 488..923
NoneNo IPR availablePANTHERPTHR43173FAMILY NOT NAMEDcoord: 488..923
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..965
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.746

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3088contigH-paniculata_contig3088:7022..14048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3088.8355.1mRNA_H-paniculata_contig3088.8355.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3088 5431..14093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3088.8355.1 ID=prot_H-paniculata_contig3088.8355.1|Name=mRNA_H-paniculata_contig3088.8355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=966bp
MGTSVRRRGSRALPLVLLVVGVGPLDAMKWPFSVTQPPVPQQVKVSFDDE
SFSFWDPFKHTGFNASSVLVPAVEEAGRRAPGYIAYAGFATALKLFLPPN
ALTALNVIYVAGALARPHRDVEAFCKNEGTLLLLSPPIHVALMGSVLRAT
RFRTWRRLFVKATLFRLRYQLLFRRMYRPRWVTTGPSSMTLIVKDTAAAA
RSVQGLFPGLCSQTALLAGGCRLPYWPDCIPPPRVEKGWRKFRRLDRGLK
REFGKRARRVRPGDGRRHGVGILGWRIPHKIVFGTVRMVGGLLSDPASRA
KRSTRKRRGGRKGRDRTRSHNSRLVQLEGSDGGQEGEATVELLKEVEDKN
EDEEEEPTESQSPRAPILLGHTLNFPVEGPLIRLHNVTAIASVGSTLTKS
YRALAELPFGDADEFAAWSSLCSPSTSSSSNGVAVATEISKEAKLPGWTA
ADPEDIEVDNETDKQHSAVVGPPSMPPPPPPPPASLQPVIIKRNVPRQLK
LSADDIAAAQKALRRMTYRSELDLDLSGVMAEVAAAVAKAGDLRVEASSI
EMVRANLARAGMLGSAVVVPQVMSCPELGRLARRGLLVTTALRGVDVSDA
RVMDHAAARGEKERGRFVDGLFAVFGQMCLADGCFPSNPMPDNLLYMYSG
QVGLTDLSAVCQLTEEQRRALCRLYRTMAELKNEDATNPSAAAESKARAV
MEGVGFVIDLPPAGGIARTSTYYAESRGGASALSPSSLRKKSWTQEEVMD
AVAAAGEATLDVSLGNDAEAAGSPDGGEDDEDHDNDDDPENKNETAMAER
DNVEMENEQEEKGEDEEDEEVVGAAAAVPPPSPPSPPPPLMVARAPLTHV
LLLRGLFDTQRDEALDLLGGGCVELMRGMAVRRLPRAMVPVLRMVANLRG
VCAHLDVDKSLLPQFSRAASKGLSWRLALSSSRGGGADRTGAGLGLDSSS
QRLASAIYQPEAAEA*
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