prot_H-paniculata_contig3080.8344.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3080.8344.1
Unique Nameprot_H-paniculata_contig3080.8344.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length491
Homology
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BLAST of mRNA_H-paniculata_contig3080.8344.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.010e-5
Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    8 CSHEGCPTRPSYGLASTRKVEFCAGHAKDGMVDVRN 43
            C H GCP +P YG+A T+K EFC+GH K GMVDV N
Sbjct:    4 CGHAGCPKQPKYGVAGTKKREFCSGHRKAGMVDVVN 39
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BLAST of mRNA_H-paniculata_contig3080.8344.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 5.320e-5
Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 0 
Query:    6 RECSHEGCPTRPSYGLASTRKVEFCAGHAKDGMV 39
            R C+HE C   P+YG+  TRK EFCA HA DGMV
Sbjct:   15 RRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMV 48
[Close]
BLAST of mRNA_H-paniculata_contig3080.8344.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 6.320e-5
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    4 RRRECSHEGCPTRPSYGLASTRKVEFCAGHAKDGMVDVRN 43
            R  +C HE C  RP+YG+A ++K EFC+ HA+DGMV+V N
Sbjct:   60 RMSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNN 99
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3080.8344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KW71_9PHAE2.010e-563.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBM3_9PHAE5.320e-561.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT00_9PHAE6.320e-555.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3080contigH-paniculata_contig3080:14099..15913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3080.8344.1mRNA_H-paniculata_contig3080.8344.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3080 3475..16751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3080.8344.1 ID=prot_H-paniculata_contig3080.8344.1|Name=mRNA_H-paniculata_contig3080.8344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=491bp
MSCRRRECSHEGCPTRPSYGLASTRKVEFCAGHAKDGMVDVRNKMCSHEG
CFTQPSYGLASSRKADFCVRHAKDGMVHLKRKTCSYEGCLTLPSYGLAGT
RKVEFCVGHAKDGMVRVKRQRCSHEGCLTFPSYGLASTRKAECCVRHAKD
GMVHVIRKRCSHEGCSTQPSYGLANTRKADFCAGHAKHGMVDVLNKACSH
EGCSTQPSYGLASTRKAEFCARHAKDGMIQLRNKTCYHEGCSTQPSYGLA
GTRKAEFCVGHAKDGMVHVKRKRCAHEGCSTQPSYGLASRRKADFCVRHA
KDGMVHVRNKTCYHEGCSTQPSYGLASTRKADFCVRHAKGGMVDVRNKTF
HHERCSTQPSCGLAEDAEEGMVAGMTRKSFNRGCRLQKPPSPSQIKLELP
SEEADGHGYTVTAEKAGKRNSRTSVPSHSGSSLLRELRSAKRARIGAGSI
SSEQLLLGMPAAGLSSLDDGTNVKTEVTVSRRSVSDQASQ*
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