mRNA_H-paniculata_contig30766.8330.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: A0A2U9GIQ0_9STRA (Reverse transcriptase n=1 Tax=Psammoneis japonica TaxID=517775 RepID=A0A2U9GIQ0_9STRA) HSP 1 Score: 397 bits (1021), Expect = 1.200e-128 Identity = 224/467 (47.97%), Postives = 307/467 (65.74%), Query Frame = 1
Query: 4 LKVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDRIK-LKKDGKFKIKP----SLKDAIVQEGMRFLLELLF----KAKSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIEK-------KGMFCSINNPFFLNLAK--YKQDKFNFKTLNKSLTYNKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSVN 1350
LK N S IMSD +FLI+CW RI NK S L +D ++ ++E WF++TA+K++NG + FQ R K + K K++P SLKD IVQEGMR LLE+LF K SY R N+ L LNN+ K KGCSWYIEG + +Q + + +L+SIIK KVDDQAFIDLLYKY V Y E N K P++ + +L IL NIYMH FD+W+E KG + N +F N K K N +++ S+ N K+++Y RY ++FIIGV+GS++DC+ L+N++N FL+ L+L+++ DK KI + +++ FLGYRI+K + K ++ D + + + D I + K+LI+ KYATK G TRN + +N+ L +II HY+ VER ILNYYSLANNY NL S++H+ILKYSCVLTIASKMKL+TKK+VF+KYGK+L I +E GKII YP++N
Sbjct: 155 LKATNLSVIMSDPNFLIACWVRIRSNKGS-LTPAFDGTIDGIKESWFSETASKIRNGGYKFQVARRKYVPKPNSNKLRPLTMPSLKDKIVQEGMRLLLEILFEPLFKDSSYGWRPNQGCLTALNNIRMKCKGCSWYIEGDIEQQFPTMTHNILVSIIKTKVDDQAFIDLLYKYMKVGYGE-NLKLATPMRIGVIQGGVLSPILANIYMHPFDEWMENFLKPNFDKGDKRAKNPEYFKNYYKSGLKAKDKNLRSV-LSMDPNFKRIYYFRYADDFIIGVDGSKKDCMELKNKINDFLKTKLSLVLNLDKTKITNAQRESTKFLGYRIHKTVMRKMPIRRDKIGRLSRIVPRPILDGPIDEIVKRLIERKYATKAGNPTRNARFINHQLPDIINHYRTVERGILNYYSLANNYGNLASRIHFILKYSCVLTIASKMKLETKKRVFKKYGKDLRILNEKGKIIACYPTIN 618
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: A0A343A6U0_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Navicula ramosissima TaxID=265559 RepID=A0A343A6U0_9STRA) HSP 1 Score: 379 bits (974), Expect = 1.280e-121 Identity = 216/469 (46.06%), Postives = 299/469 (63.75%), Query Frame = 1
Query: 1 GLKVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDRIK-LKKDGKFKIKP----SLKDAIVQEGMRFLLEL----LFKAKSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIEK-------KGMFCSINNPFFLNLAKYKQD--KFNFKTLNKSLTY--NKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSV 1347
G K +N S I+SD FL+SCW RI NK NL +D S+ ++ WFT+TA ++KNG + F+ R K + K K++P S KD I+QEGMRFLLE+ LFK SY R N+ L +N++ K K SWYIEG + +Q LN+ LISI+ K+ DQAFID++YKY V Y E + KE +P+K + IL IL NIYMH FD+W+ + KG + N +F KY QD K KT+ LT N K+++Y RY ++F+I V+G++EDCI L+NQ+ FL +NL ++ +K KI + + + FLGY I+K +NK ++ D + + + + DA IK + K+LI+ KYAT+ G TRN + +N+ L +II HY+ VER ILNYYSLA NY + ++VH+ILKYSCVLTIASKMKLKTK+KVF+KYGK+L I +E GKII YP++
Sbjct: 154 GNKANNLSTILSDPKFLVSCWVRIRSNKG-NLTPAFDGSIDGIKSSWFTETAKQIKNGKYQFKVARRKYILKPNSDKLRPLTMPSSKDKIIQEGMRFLLEIIFEPLFKDNSYGWRPNRGCLTAINDIKMKCKAASWYIEGDIEQQFPSLNHKFLISILNSKIHDQAFIDMVYKYIKVGYGE-SIKEAIPMKVGVIQGGILSPILANIYMHPFDEWVTEYLKPNFDKGDKRAKNPEYF---KKYHQDGQKVKDKTIRSVLTQDPNFKRLYYFRYADDFLISVDGTKEDCISLRNQIKEFLSNKINLTLNVEKTKIINAQHESAKFLGYIIHKTPMNKMPIRRDKKNRLARIVPRPMTDAPIKEIVKKLIERKYATRNGNPTRNGRFINHRLPDIINHYRSVERGILNYYSLATNYSRMAARVHFILKYSCVLTIASKMKLKTKRKVFKKYGKDLNILNEKGKIIACYPTI 617
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: I6N5U4_9STRA (ORF715 n=1 Tax=Endosymbiont of Kryptoperidinium foliaceum TaxID=1079369 RepID=I6N5U4_9STRA) HSP 1 Score: 299 bits (766), Expect = 8.970e-91 Identity = 181/463 (39.09%), Postives = 263/463 (56.80%), Query Frame = 1
Query: 7 KVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDRIK--LKKDGK--FKIKPSLKDAIVQEGMRFLLELLFKA----KSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIEK-------KGMFCSINNPFFLNLAKYKQDKFNFKTLNKSLTYNKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSVN 1350
K N S+IMSD +FLI+ W R+ N S ++ ++ WF TAN M+NG F F P R + DGK F PS +D IVQE MRFLL L+F+ S+ + + LN + ++ +W+IEG + +Q LN+ +L++ +K K+DDQAFIDL++KY V Y + + + V ++ +L IL NIYM FD W+E KG N + + K + +L+ N ++ Y RY ++FI+G+ G R C ++ ++ IFL + L L ++ DK KI H + D FLGYR+YK K++K + + + V D I + +L + Y K G TRN + +N++LY+++EHYK VER IL YY LANNY + ++VHYILKYSC LTIASKMKL T ++VF +YGK L I DE+GKIIT YP+V+
Sbjct: 156 KCTNLSKIMSDPNFLIAAWVRVRSNSGSLTPALNKETLDGIDVPWFEKTANTMRNGIFQFSPSRRTHISRPDGKKRFLTIPSPRDKIVQEAMRFLLTLVFEGDFSENSHGWVTGRGCHAALNQIKLEFAHDNWFIEGDIDQQFPSLNHQVLVNQLKTKIDDQAFIDLIFKYLKVGYGKSSNRT-VKMRLGVSQGGVLSPILANIYMIPFDKWVENHLIPKYTKGKRKRANPVYSKMIRSGKVTDHSIHSLHPR-DQNFIRLHYVRYADDFIMGLNGPRVYCEHIVDECRIFLSEQLKLSLNIDKTKITHSQLDSALFLGYRVYKTKLSKMKISYTIKSNRTCRTTNTVLDGPIDQIVAKLRERNYTKKDGSPTRNGRFINHTLYDMVEHYKMVERGILQYYKLANNYGRVAARVHYILKYSCALTIASKMKLTTLRRVFNRYGKNLNIKDESGKIITNYPTVD 616
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: A0A8F1B8C0_9STRA (Putative reverse-transcriptase n=1 Tax=Tryblionella apiculata TaxID=1003145 RepID=A0A8F1B8C0_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.590e-90 Identity = 183/465 (39.35%), Postives = 263/465 (56.56%), Query Frame = 1
Query: 7 KVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDRIKL--KKDGKFKIK--PSLKDAIVQEGMRFLLELLFKA----KSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIEK-------KGMFCSINNPFFLNLAKYKQDKFNFKTLNKSLTYNKK--QVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSVN 1350
K N S IMSD +FLI+ W RI N S ++ + WF +TAN M+NG F F P R K DG+ ++ PS +D IVQE MRFLL L+F+ S+ S +S LN + ++ +W+IEG + +Q LN+ +L++++K K+DDQAFIDL+YKY Y E K IV + +L +L NIYM FD W+E+ KG N + + K + +L +N+ ++ Y RY ++FII + G + C + ++ FL + L L ++ +K KI H + D TFLGYR++K K++K + + + + D I + +L + Y K G TRN + +N++LY++IEHYK VER IL YY LANNY + ++VHYILKYSC LTIASKMKL T ++VF KYGK L I DE+GKIIT YP+V+
Sbjct: 182 KCINLSSIMSDPNFLIAAWARIRSNSGSLTFALSKETLDGIALSWFEETANTMRNGIFQFSPSRRTYISKSDGRKRLLTIPSPRDKIVQEAMRFLLMLVFEGDFSKNSHGWVSGRSCHTALNQIKMEFAHDNWFIEGDIDQQFPSLNHQVLVNLLKTKIDDQAFIDLIYKYLRAGYGESPDK-IVKMHIGTSQGGVLSPVLSNIYMTPFDKWVERDLIPKYTKGKRKKANPAYTKMIRSGKVTDHSIPSL---YAHNRNFIRLHYVRYADDFIISLNGPKVYCKQIVDECKTFLFEQLKLSLNIEKTKITHSQLDSATFLGYRVHKTKLSKMKIAYNLKGQLSRRTTNTIIDGPIDRIVGKLTERGYTKKDGSPTRNGRFINHTLYDMIEHYKMVERGILQYYKLANNYGRVAARVHYILKYSCALTIASKMKLTTLRRVFNKYGKNLNIKDESGKIITSYPTVD 642
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: A0A023PJ99_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A023PJ99_9STRA) HSP 1 Score: 297 bits (760), Expect = 6.130e-90 Identity = 181/468 (38.68%), Postives = 272/468 (58.12%), Query Frame = 1
Query: 7 KVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFS--MGYVEEKWFTDTANKMKNGSFNFQPDRIKL--KKDGKFK--IKPSLKDAIVQEGMRFLLELL----FKAKSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIEKKGMFCSINNPFFLNLAKYKQDKFNFKTLNKSLTYNK------------KQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPS 1344
K++N SEIMSD ++LI+CW +I +K +L ++ + + + E+WF T+ +NG F F+P + K +G+ + I PS KD IV EGMRFLLEL+ F KSY RS + L + + G W+IEG V++Q S +N+ +L I+ +K+ DQ FIDL++KY V + + EI P+ + L ++L NIYM+ FD W+EK+ M P F + K + + + + NK K++ Y RY ++F++GV GS++DC L++++ FL L LI++ +K KI H D FLG+RI+ ++ K ++ +S + + V DA +K V ++LI+ +A +GQ RN K +N L IIEHYK +E I +Y+ ANN L +VHYILKYSC LTIASKMKL+T +VF KYGK+L+I D+ G+II YPS
Sbjct: 153 KINNLSEIMSDPEYLITCWTKI-RSKKGSLTPTFEKNDTLDGINEEWFKKTSRTFRNGIFQFKPAQRTYISKSNGERRPLIMPSPKDKIVMEGMRFLLELIYEPEFSEKSYGWRSKRGCFTALGQIKIHFGGTRWFIEGDVSQQFSTINHKILAEILSEKIKDQPFIDLVFKYIKVGFGK-RLDEIQPMNTGIIQGGNLSTMLANIYMNMFDQWMEKELM------PRFNKGIRRKANPEYTRMICEGKAMNKMIQTGLGDDDQFKRIRYVRYADDFLVGVIGSKKDCESLRDEIKRFLADRLKLILNIEKTKISHAVLDSAKFLGHRIHMTELTKMPLKYNSEGVLTRRSPRLVQDAPLKEVVQKLIEKGFAKGEGQPCRNGKFVNLGLPEIIEHYKSIETGIRQFYAGANNQHRLSGRVHYILKYSCALTIASKMKLRTLSRVFGKYGKDLSIVDDKGRIIISYPS 612
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: Q3S275_THAPS (ORF718 n=2 Tax=Bacillariophyta TaxID=2836 RepID=Q3S275_THAPS) HSP 1 Score: 296 bits (757), Expect = 2.020e-89 Identity = 183/463 (39.52%), Postives = 259/463 (55.94%), Query Frame = 1
Query: 7 KVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDR---IKLKKDGKFKIK-PSLKDAIVQEGMRFLLELLFKA----KSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIEK-------KGMFCSINNPFFLNLAKYKQDKFNFKTLNKSLTYNKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSVN 1350
K N S IMSD +FLI+ W RI N S ++ + W +TAN M+NG F F P R I GK + PS +D IVQE MRFLL L+F+ S+ S + LN + ++ +W IEG + +Q LN+ +L++++K K+DDQAFIDL+YKY V Y E K IV ++ +L +L NIYM FD W+E+ KG N + + K + +L + N ++ Y RY ++FI+G+ G + C + ++ FL + L L ++ +K KI H + D TFLGYR+YK K++K + + + V D + K+L + Y K G TRN + +N++LY++IEHYK VER IL YY LANNY + ++VHYILKYSC LTIASKMKL T ++VF KYGK L I DE+GKII YP+V+
Sbjct: 159 KCVNLSSIMSDPNFLIAAWARIRSNSGSLTFALSKETLDGIALSWLEETANTMRNGIFQFSPSRRTYISKSDGGKRPLTIPSPRDKIVQEAMRFLLMLVFEGDFSKNSHGWVSGRGCHTALNQIKMEFAHDNWLIEGDIDQQFPSLNHQVLVNLLKTKIDDQAFIDLIYKYLRVGYGESPDK-IVKMRIGTSQGGVLSPVLANIYMTPFDKWVERDLIPKYTKGKRRKANPVYTKMIRSGKVTDHSIPSL-YAHDRNFIRLHYVRYADDFIMGLNGPKVYCKQIVDECKTFLFEQLKLTLNIEKTKITHSQLDSATFLGYRVYKTKLSKMKIAHNLKGQLSRRTTNTVLDGPTDQIVKKLNERGYTKKDGSPTRNGRFINHTLYDMIEHYKTVERGILQYYKLANNYGRVAARVHYILKYSCALTIASKMKLTTLRRVFNKYGKNLNIKDESGKIIISYPTVD 619
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: A0A7T8ILV4_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A7T8ILV4_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.120e-87 Identity = 182/470 (38.72%), Postives = 264/470 (56.17%), Query Frame = 1
Query: 7 KVDNFSEIMSDSDFLISCWKRIVLNK-------NSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDRIKL--KKDGKFK--IKPSLKDAIVQEGMRFLLELLFK----AKSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIEK-------KGMFCSINNPFFLNLAKYKQDKFNFKTLNKSLTYNKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSVN 1350
K +N S IMSD +FLIS W R+ N N++ LD D + WF T+N M+NG F F P R + DGK + PS KD IVQE MRFLL L+F+ S+ +N+ LN + ++ +W+IEG + +Q +N+ +L+++++ K+ DQAFIDL+YKY V Y E + K I + +L IL NIYM FD W+E KG N + + K + + +S N ++ Y RY ++FI+G+ G + C + + IFL + L LI++T+K KI H + D FLGY ++K K++K + +S+ V D + + ++L YA K G TRN + +N+ LY+++EHYK VER IL YY LANNY + +++HYILKYSC LTIASKMKL T ++VF KYGK L I +E G+IIT YP+V+
Sbjct: 156 KCNNLSIIMSDPNFLISVWVRVRSNNGSLTPALNTDTLDGIDLT-------WFQKTSNSMRNGIFQFSPSRRTYISRPDGKKRPLTIPSPKDKIVQEAMRFLLMLVFENDFSKNSHGWVTNRGCHTALNQIKMQFAQDNWFIEGDIDQQFPSINHQVLVNLLETKITDQAFIDLIYKYLKVGYGESSNK-ITRMSLGISQGGVLSPILANIYMTPFDKWVESHLIPKYTKGKRKKANPVYTKMIRSGKVTDHSIHSF-QSHDRNYIRLHYVRYADDFIMGLNGPKIYCEQIVEECRIFLFEQLKLILNTEKTKITHSQLDSAKFLGYCVHKTKLSKMKIAYNSKGKLTRRTTNTVLDGPVDQIVEKLKQRGYANKTGSPTRNGRFINHPLYDMVEHYKMVERGILQYYKLANNYGRVAARIHYILKYSCALTIASKMKLTTLRRVFNKYGKNLNIKNELGEIITNYPTVD 616
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: A0A0E3M4A7_BANFU (Reverse transcriptase domain-containing protein n=1 Tax=Bangia fuscopurpurea TaxID=101920 RepID=A0A0E3M4A7_BANFU) HSP 1 Score: 231 bits (588), Expect = 2.490e-65 Identity = 159/466 (34.12%), Postives = 251/466 (53.86%), Query Frame = 1
Query: 1 GLKVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDRIKL---KKDGKFKIK-PSLKDAIVQEGMRFLLELLFKA----KSYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFD----DWIEK--KGMFCSINNPFFLNLAKYKQDKFNFKTLNKSLTYNKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAF--KFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSVN 1350
G +V+ S ++ + FLI+ + +I NK + + ++ ++ +WF A + NGS+NF+P R K K G+ + P+ +D I+QE MR LLEL+++ S+ R NKS LN + SW+IEG +++ +++T L+S + K + DQAFIDL+YK Y +K +V ++ IL NIY+H FD + E KG+ N + + K DK NF + N K++ Y RY ++F+IGV GS+ DC ++ ++ L+K L ++ +K KI + K+D FLG+ I+ K Q ++ ++ V + + DA I + +L Y G TR K+L+ L II YK ++ +LNYYS+ANNY L +++H+ LKYSC LTIASKMKL T KKVF+ YG L + +E G+II +P ++
Sbjct: 169 GKRVEGLSRLLRNPRFLIASYSKIKSNKGALTPGLNNETLDGIKLEWFEKAAESIVNGSYNFEPVRRKFIPKPKGGERPLGIPNPRDKIIQEAMRQLLELVYERIFVDSSHGFRPNKSCHSALNQIKMTMGYSSWFIEGDISKYFDAVDHTYLVSKLTKVIKDQAFIDLIYKVLKAGYGFSKWK-VVSTNIGFPQGGVISPILANIYLHDFDLKMLEMAENFNKGIRRKANPEYTKMVRDGKVDKRNFIYPSVGNDSNFKRMKYVRYADDFLIGVIGSKADCEGIRTRIEDVLKKEFLLKLNIEKTKITNAKQDCAFFLGHNIHISVPFKDKTQYLPKRGNKPVRITSRPLLDAPIDKIVSKLGSVGYCKTDGTPTRFGKLLHEPLAEIIHRYKTLQNGLLNYYSMANNYGRLSARIHWTLKYSCALTIASKMKLGTLKKVFKHYGANLEVKNEKGEIIQCFPKIS 633
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: UPI001D1014BE (hypothetical protein n=1 Tax=Ahnfeltia fastigiata TaxID=31363 RepID=UPI001D1014BE) HSP 1 Score: 231 bits (589), Expect = 6.660e-65 Identity = 158/471 (33.55%), Postives = 269/471 (57.11%), Query Frame = 1
Query: 1 GLKVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYD-FSMGYVEEKWFTDTANKMKNGSFNFQPDR---IKLKKDGKFKIK-PSLKDAIVQEGMRFLLELLFKAK----SYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKY-RN-VNYDE-INFKEIVPIKKNAVLNNILPSILIN---IYMHSFDDWIEKKGMFCSINNPFFLNLAKYKQDKFNFKTLNK-SLTYNKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQ---GVAFKFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMY--PSVN 1350
G K+ S I+ + +L++C+ +I +++ L D ++ + E+WF TA KM NG++ F+P R I + G+ + P+ +D IVQE +R LLE++F + S+ RS++S LN + K W+IEG +A+ +++ LL++ I K ++DQ FIDL+YK RN YD + + I+ + + V++ +L +IL+N I M E G N+ + + K K ++ N K L N K++ Y RY ++F++ V GS+EDC+ ++N + +L+ + L ++ +K KI H D FLG++IY ++K + SRK + V + DA I + +L + + G TR ++++ L+ II+ Y +E+R++N+YSLA+NY +++++HYILKYSC LT ASK+KLKT +KVFRK+GK+LT+ + +++ Y PS N
Sbjct: 167 GKKIRGISNILRNPLYLMACYHKIK-SRDGALTTGLDKATLDGINEQWFIKTAEKMVNGTYKFKPFRRQFIPKPQGGERPLGIPNPRDKIVQEAIRQLLEIVFDRQFQDVSHGFRSHRSCHTALNEIKIKMGSSRWFIEGNIAKCYDKIDHNLLVAKINKVIEDQPFIDLIYKVLRNPYGYDNRVIYPSIIGVLQGGVVSPMLSNILLNDLDIAMLEMASSFEL-GKRRKANHEYTKMIRKSKVNR-NLKILPLLGDDSNFKRMKYIRYADDFLVSVIGSKEDCVKIRNDILNYLKNDFKLDLNLNKTKISHATNDGAVFLGHKIYISDISKYKTKYVSRKDGKVLTRVVSRLRMDAPIGKIVNKLTLSGFCKANGNPTRCGRLIHEPLHEIIKSYGNLEKRLINFYSLASNYSRVVARIHYILKYSCALTFASKLKLKTLRKVFRKFGKDLTVLSDGNEVLANYLTPSYN 634
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Match: A0A0A7A710_9FLOR (Reverse transcriptase domain-containing protein n=1 Tax=Hildenbrandia rubra TaxID=31481 RepID=A0A0A7A710_9FLOR) HSP 1 Score: 228 bits (580), Expect = 1.400e-63 Identity = 156/468 (33.33%), Postives = 250/468 (53.42%), Query Frame = 1
Query: 1 GLKVDNFSEIMSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFNFQPDRIKL---KKDGKFKIK-PSLKDAIVQEGMRFLLELLFKAK----SYNCRSNKSSLFVLNNVYTKYKGCSWYIEGKVAEQISDLNYTLLISIIKKKVDDQAFIDLLYKYRNVNYDEINFKEIVPIKKNAVLNNILPSILINIYMHSFDDWIE------KKGMFCSINNPF--FLNLAKYKQDKFNFKTLNKSLTYNKKQVFYSRYVNNFIIGVEGSREDCIYLQNQMNIFLQKNLNLIVDTDKIKIKHIKKDFVTFLGYRIYKKKVNKTVMQVDSRKHSQGVAF--KFVFDAHIKYVEKQLIDNKYATKKGQATRNVKILNYSLYNIIEHYKEVERRILNYYSLANNYKNLISKVHYILKYSCVLTIASKMKLKTKKKVFRKYGKELTITDENGKIITMYPSVN 1350
G +++ S ++ + +FL + + +I NK + ++ ++ +WF A + NGS+NF+P R K K G+ + P+ +D I+QE MR LLEL+++ S+ R NK LN V SW+IEG +++ +NY L+S + K + DQAFIDL+YK Y + I+ ++ IL NIY+H FD I KG+ N + + K + FN+ ++K + K++ Y RY ++F+IGV GS+ DC+ +++ + L++ L ++ +K KI + K+ FLG+ ++ K +Q +++ ++ V + + DA IK + +L Y G TR K L+ L II YK ++ +LNYYS+ANNY L +++HYILKYSC LTIASKMKL T KKVF +YG L I +E K+I YP ++
Sbjct: 173 GKRIEGLSNLLQNPNFLTASYSKIKSNKGAVTPGLNSETLDGIKLEWFEKAAKSIVNGSYNFEPVRRKFIPKPKGGERPLGIPNPRDKIIQEAMRQLLELIYERIFLKFSHGFRPNKGCHTALNQVKMTMGYSSWFIEGNISKYFDTVNYNHLVSKLTKVIKDQAFIDLIYKVLKAGYGFPKGR-IIGTSMGFPQGGVISPILANIYLHDFDLKILAVAQTFNKGLRRKANPEYTKMVRDGKVNRKHFNYPAMSKDTHF--KRMEYVRYADDFLIGVIGSKADCVEIKSNIADILKEEFFLKLNLEKTKITNTKQASAFFLGHCVHISLPTKDKIQYLAKRGNKLVRLTSRPLLDAPIKEIILKLNSVGYCKTDGTPTRFGKFLHEPLAEIIYKYKSLQNGLLNYYSMANNYGRLSARIHYILKYSCALTIASKMKLGTLKKVFNQYGANLKIKNEKEKVIQSYPKIS 637 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30766.8330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30766.8330.1 >prot_H-paniculata_contig30766.8330.1 ID=prot_H-paniculata_contig30766.8330.1|Name=mRNA_H-paniculata_contig30766.8330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=440bp MSDSDFLISCWKRIVLNKNSNLLDNYDFSMGYVEEKWFTDTANKMKNGSFback to top mRNA from alignment at H-paniculata_contig30766:9..1358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30766.8330.1 ID=mRNA_H-paniculata_contig30766.8330.1|Name=mRNA_H-paniculata_contig30766.8330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig30766:9..1358+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30766:9..1358+ >mRNA_H-paniculata_contig30766.8330.1 ID=mRNA_H-paniculata_contig30766.8330.1|Name=mRNA_H-paniculata_contig30766.8330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2640bp|location=Sequence derived from alignment at H-paniculata_contig30766:9..1358+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |