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Homology
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE) HSP 1 Score: 169 bits (429), Expect = 6.560e-49 Identity = 100/166 (60.24%), Postives = 117/166 (70.48%), Query Frame = 3
Query: 3 RGVAAWTAGAVVALTSADVSQGFVAYTGSGLRPASVSYGAKRARAAVAAACGR--RPAGSGGLQMHKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDRT 494
RGV A TAGA +AL V++GFV Y +R A+ + G R + A RP S LQMH+VTIEH G + LEV +ILEAALD IDLPHDCKLGVCLTCPS VVSGEVDQS+GTL+ +V G+ALTCC+Y +SDV IRSVEEDELVGAQFSDR+
Sbjct: 2 RGVDACTAGAFLALMG--VTRGFVPYGTPAIRSAAATLGGSRTSDSTRRARQETLRPTFSA-LQMHQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 164
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.790e-45 Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 3
Query: 159 RRPAGSGGLQMHKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDR 491
RRP G L MH+VTIE GK+H LEV + S+LEAALD GI+LPHDCKLGVCLTCPS +VSGEVDQ TLD +VVEQG+ALTCCS+P+SD+VIR+++EDELVGAQF R
Sbjct: 47 RRPRG---LYMHQVTIEVAGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGR 154
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.300e-42 Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 3
Query: 192 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDR 491
H+VTI+H GK LEV +ILEAALD GIDLPHDC+LGVCLTCPS +VSGEVDQ GTLD +VVEQGFALTC SYP+SD V+RSVEEDE+V AQF+DR
Sbjct: 51 HQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADR 150
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK) HSP 1 Score: 143 bits (360), Expect = 7.160e-39 Identity = 70/101 (69.31%), Postives = 81/101 (80.20%), Query Frame = 3
Query: 192 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDRT 494
H+VTIEH G T LEV SIL+AALD GIDLPHDCKLGVCLTCPS VVSGEVDQS+GTL+ +V QG+ALTC ++P+SD I S+ EDELV AQFS R+
Sbjct: 42 HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 142
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH) HSP 1 Score: 139 bits (350), Expect = 2.290e-37 Identity = 68/98 (69.39%), Postives = 80/98 (81.63%), Query Frame = 3
Query: 192 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 485
+KVTI+H GK L+V SIL AALD GIDLPHDCKLGVCLTCPS +VSG+VDQS+GTL +V +G+ALTC S+P SDVV+RS+EEDELV AQFS
Sbjct: 43 YKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFS 140
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: W7U5Y2_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5Y2_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.200e-36 Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 3
Query: 180 GLQMHKVTIEH-GGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 485
GL HKVTIE GKTHE+ V S+LEAALDEGI+LPHDC+LG CL C + ++SG VDQ+ TLD +V+EQG+ALTCCSYP+SDV IRS+ EDEL+ QF+
Sbjct: 37 GLFGHKVTIETLDGKTHEINVESYKSVLEAALDEGIELPHDCQLGTCLVCAAKLISGTVDQTGSTLDDSVMEQGYALTCCSYPQSDVTIRSIPEDELIDEQFA 139
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: K4AFH5_SETIT (Ferredoxin n=4 Tax=PACMAD clade TaxID=147370 RepID=K4AFH5_SETIT) HSP 1 Score: 128 bits (322), Expect = 1.380e-32 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 3
Query: 192 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 485
+KVTIEHGG++ +EV G +IL ALDEG+D+PHDCKLGVC+TCP+ +VSGEVDQS+G L VV QG+AL C +YP+SD IR + EDEL+ Q +
Sbjct: 91 YKVTIEHGGESRVVEVEGDETILSRALDEGLDVPHDCKLGVCMTCPARLVSGEVDQSDGMLSDDVVAQGYALLCAAYPRSDCTIRVIPEDELLQVQLA 188
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A835R201_VANPL (Ferredoxin n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R201_VANPL) HSP 1 Score: 126 bits (316), Expect = 2.770e-32 Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 3
Query: 171 GSGGLQMHKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 485
G G +KVTIEHGG+ LEV +IL ALDEG+++PHDCKLGVC+TCP+ ++SG VDQSEG L V+ +G+AL C SYP+SD VIR++ EDEL+ Q +
Sbjct: 37 GGGRCWAYKVTIEHGGERRTLEVGEDETILRRALDEGLEVPHDCKLGVCMTCPARLLSGAVDQSEGMLSDDVIARGYALLCSSYPRSDCVIRTIPEDELLSLQLA 141
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ) HSP 1 Score: 126 bits (316), Expect = 2.930e-32 Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 3
Query: 192 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 485
+KVTIEHGG++ +EV +IL ALDEGID+PHDCKLGVC+TCP+ +V+GEVDQS+G L VV QG+AL C SYP+SD IR + EDEL+ Q +
Sbjct: 46 YKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143
BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED) HSP 1 Score: 125 bits (314), Expect = 5.010e-32 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 3
Query: 192 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 485
++VTIEHGG++ +EV +IL ALDEGID+PHDCKLGVC+TCP+ +V+GEVDQS+G L VV QG+AL C SYP+SD IR + EDEL+ Q +
Sbjct: 41 YRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 154.8 |
| Seed ortholog evalue | 2.1e-35 |
| Seed eggNOG ortholog | 2880.D7G156 |
| KEGG ko | ko:K02639 |
| KEGG Pathway | ko00195,map00195 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009642,GO:0009644,GO:0009987,GO:0016491,GO:0022900,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0055114 |
| EggNOG free text desc. | 2 iron, 2 sulfur cluster binding |
| EggNOG OGs | 2RZRG@2759,COG0633@1 |
| Ec32 ortholog description | 2Fe-2S ferredoxin-type domain |
| Ec32 ortholog | Ec-08_005330.1 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00194 |
| Exons | 4 |
| Model size | 933 |
| Cds size | 309 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3071.8325.1 >prot_H-paniculata_contig3071.8325.1 ID=prot_H-paniculata_contig3071.8325.1|Name=mRNA_H-paniculata_contig3071.8325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MHKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMV
VSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSD
RT* back to topmRNA from alignment at H-paniculata_contig3071:3564..14113+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3071.8325.1 ID=mRNA_H-paniculata_contig3071.8325.1|Name=mRNA_H-paniculata_contig3071.8325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10550bp|location=Sequence derived from alignment at H-paniculata_contig3071:3564..14113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGAGGGGTGTTGCGGCATGGACTGCGGGAGCTGTCGTTGCCCTCACATCA
GCTGATGTCTCCCAAGGTATGAGTGCACGACGATGTGGAAAGGGTGATGT
AACAGAGAGCACCGTGTTTCTGCCCAACGGTGGCGAGCATAGTAACCTGT
AGTTTTGTCTCTCTCGTTGTCTGGCATTCAGGATGCCTGTGCCCGCTTCT
GGATCAGTGAGATGTGGGAGTCTTTGCTGACTCGTGAGTTGTATGAGTGA
TCATGATTCTCTACAACATGGTCTTACGTTTAGGTCTCTCTGCAACATCC
TTCTTTCAGCCGCATGCGTTGGGTTAGCTAAGCCAAGTCTCTACCAATTG
CACACGTGTGGGGGGGGTGTTTAGGTTTCCTTGCTGAACAAATTGCAATG
ACGTACCCGTGGCTGCTCTCGCAATGGTTCCGAGGGATCTGTCGCTAGTG
TTGAATTTTCCTTCGATTAGGACTTTAAGCACACTCAAGTTGTCATGTGA
TCATGTGTTATGATGACACTAAGTTAGAGATACAAAAATGATGTATACAA
GTATCTTCAATCTTAACTCTGGATACTTTCTGGTGTTCCTCCTTTAGCAC
AGGATGCATTGTTTACATCACTTACGAAGTCCACACGAACACTGCATTGA
ACTAATCGCTGTGCTAAAATTTCCATGGGTATACCTCACAACGAACGTTC
TGTGTCGCACATGATCATGTGTATGTATGCGTTTGTGCCCAGCTCATCCG
AATGCAAGACAAGTGGCCTTGCGGAGGTCAACCTTCCACAACCAACACAA
GTATATTATGCTCCCTCATCTCGCCAAGTATTGTCGGACACGTGTCGTTT
GCCAGTTCAATCAGTCGTACCTCGACCCTTGACGAAAGACTCAGAAAGAT
TCCACAGTGGCACCATAGTGAAAAGCGTCAGTGATGTATCTTCGGCCATA
ATCATTGCTCGGTGGCACTTGATCTGTTTATTTTCTCAAACAAGTGTAGT
AAACGATGTGCCACAACACTGTAGCAGGGCTACGACTCCGCCCTTGTCGT
CCGTATGCTACGCTGGACGTAGGGAAAAGGCTCCCTGCGCTAGCAAAATA
GAAGAGAAGTGGGTAAAATATCATGACATCCGTGCGAATTCCATTATAGG
GGTTACTTGGGTACAGTATGTATCAAGTGTTCTGGAATGATGACCACTTT
TTCTTCTTCAGTGGGTACGTTTGTTGTGCCAAAACGACGAGAGTCAAGCT
TGAACCCGTTTGTACTTCATACTATAGTTGCAGCTCGCCCATGAATAGGG
CAGCAGACGTTGGGCACTGTACTGTACTGTCTCGGTGTATTTTTTCTCTT
TGCTTGATGCACATTGACGTCTCTCTTGGGGGTTTTCTCAGCCCAACACA
GAAAAATGGCAGTGTCTTGTCACTGTCCTTGGTCGATTGCTACAAATGTT
GATGTTATATTCGCTGACTGTGCACGCACTTCTGGTGAATGCACCAACGC
TGGACCCTCCTTTTTGGTGCCAGCGCTCTTGTTTACTCGCCTAGAAGCTA
ACTAGGAGTTCCACTGGTTCTGACTATGGGGTAGTATCTAATCCAACCCA
ATCCTATGCCTACCCCTAACCCTGACACCAACAGAGAACCTAGAGAGTGC
ATTGGAGAGTTGGGTCTGATCTGAAGATAGTCACAGAGCTATTGTCCGTA
CTGAACGCAAATGACGCCTCTATGTACTGGTGTACTTGGTAGGCGACTTA
GCAATCCATCACTCCGGATAAAAGAACGGTGCAAACCCTCCTGCTGACGG
CCTCGTCTTAATACCCTAAATACTCGAAGGTACCTATTTGTAGGGCTGTG
TATCGGTAACAACACGTTATCGATGTATCGGAACATCGTTTTTTTAGTGT
TTTTCTTTGGGCGTAAAAACGATGTATCGACGTTTTACCCGCATGTTATG
GCCATCCAACAGTTGAGCAATACGTAATTTTGCAGAGATGAAGCCAAAAC
GTGTAGTTTTCCCGCCTCCAGCAGCGCCTCCGGCGAGGCCCCCTCACTAG
CTGGGGGAAGGTCATTGGACTTGCAGCAAGCCACACGCCTGGCGTCTCAC
GCCTCCGGCTCGTTTCGCTCGCAACAATAGATTGATGATACACCGGCTTT
ACCCAGATATCGGTGCTGTATTAGGTATATTAGCTTCTTCAATCGACCAA
TACATAACCCTAGTTATTTGCGAAGCGAAAAATCGCTTAAGCTTTTTAAG
CCTGTTTTCTAGCGACCTCATTTTTTATGGAAATGATGAAATCTTGAAAA
CGCGGGATAAATTGGCTGAAACGAAAAGGAGTCGCAATTTCCATTGTTCA
AAATCCCCCATGAGGCCAAACGGAAAATTTGGATCATAGGAACAAAATTT
TCTGTTGAAGAATTTTGAAATCTAGAAAAATTGACTCTCGTCTACCTCCC
AGCAGAATTTCTTGAATTTTCTCCTCTAATATATTTCCGCTGAAAAAAGT
AATGGCTCGAGCTGACCCTTAAATGTGCGGCAAATTCGAAACCCCACTAA
CCTATCAGTGTGTTGAGGCACTTCAAAACTGATTGCGAGACCCAAACATC
GCAGCTGAAAACTGTAAACATTATTGATTACGGAATCTAATTTCAGCCGG
AGGTCGATCAACCACCAGTCCCTTCGTCTCGAGGTGTGTTATCCGTATAA
GAACCGAATGTGCTTTTGCCCCTGAATTCTATTTATTTCCATCCCAGCTT
TCTCGCGGTTAAACATAATCGCACCCATTTTCGAGTGGTGATCCCTGGTG
TGGCTATAATTTGCAAAGTATGACTGATACAAACTAACTTCCCCCCCCCC
CGAGCATGATCTACGTAGGACAGAGACCGTCACTTGCAAAGTTCGCGTCA
GGATCGTTACCAACGACTAGAAATAATCAGTGCAGGAATCGTTTCGATCC
ATGCCTACGGCATTCAAGAAACTTGAAAATTCCTGACATATTTCTCCCCA
CTTTTTGGTCATCATTTGTAATGCACGTGCGCAAATTTGTATTTCTTTTA
AATTCATAAATCATGGTCAGACCCTGTAGAGGCTCGGAAACGCATGGAGG
CACGCTCTGGGAGGCTTGCGGACGTGTGCCAGATGTGCAGCGCTGCTCAA
CTCGGTCTCTAGAGCGAGCGACAACTGGTGGCAAAATACAAGAGACACAG
CAAATACCAGTTGTACTGGTAGTCAGATAGGTAGTTCCGCCGCGTTTACT
GCACCACATCGTGGTTTCGAGTCCCACTGCGTTTATCCTTCCTCTCTCCT
CGCGATCAACCGAACCATCAATCTTTTTATCGTCCCCTCCACCAATCAAG
TACAAAAGATAGTTCAATTGATTAATTAATAACCTCCTGCATGTAGTGAT
CTCGCCTCCAAACAATTACAAACACGCAATTTAATTACAAATATATATAA
TATATATATATATATATTCTCATTACATATTCTTCCCCGGGTAAATAATT
TCCCCGCAACTTGAGGGGTCTGTAGCGTCAGACCGAAAATCATAACAACG
TACTCACACCGTAGCAATGAAGAACCTCTCGTATCGTTAGCTTTGTCGTG
TTGCGTCCCGGACCCCACGCGACGGTGTCTTCTGTCCTGATGATGATCAG
GTATGGAACTGTCGGGTTATAGCTGATTCAACCTATACTGGAGCAACAAA
ATGTTCCCAGACTATCGGTTCTGTGGTGTTATTGTCCCTATTCCGACGCG
GAACCCTTGGTACTGACCCGATCAACCCATTTCAGTTTACAAATCTAATT
TAATCCAACTCTCAGCAGAGAACATTGGCATTGATCTTGGCAACATAATG
ACGGGAGAGTCTACACAACACATGATTGGTCAAAATCGTGTCAAAGGAAA
TATACAATAAATTGGCAGCTCACATGAACTGAAATATAAACACGACACCC
AGAAAGTTCCTCGAAAGTTCCGGCCTGAAAAGTAGGTCCTCTGACATTCT
GACGCGTGCCCGGAAAAACGGAAAACCGTGTGCCGCTTGACCACAGTGCC
AACTGAGCTTTTTCTTCAAGATATACGTACACCAAGCCTGAGCAATGAGG
TTTATGCTGATGCTATCGAAGATCCTGCCATACTTTCTGTCCATTAGACC
GCGTGCTTTCCTTCCTTTTGAACAGTAGTGCTCACACTGAAGGGCACATC
TCATTAGATAATAGTATATTTGTTATTGTGATACTGTTCGCTTCCTCTTG
TACACGAAGGCTTGCGTTCACTTGACAAGCCCTCTAGCGCTCTCCTCGTA
GACTCGTTCTCATGCAATTTTCAGATCGTTCCTCAGAACGTTCTTCCTTC
TGGACCACTCCAGAAGGGCTTCTTGAAGATTCAACACGAATTGCCTTATT
ACATGAAATCGTCAAACAGGCATATCGTGACTACAGTACATACAGTGCTA
CTCTTTTGTACAGCTTTATAATGCATAGCACATACCATTTCAATAGTTTA
GGGCTAGGGTTGGTTCTGCTCGACTCGCGGCGCCACGAGAAACGCCTCCA
AATAAATGTGCTACAGCAAAGTTTTTGAACAAGTTAAGACGTGCTTGAAC
GTGCCGCCAGGATTCGTTGCCTACACTGGGTCAGGGCTGCGACCTGCGTC
CGTCTCATATGGAGCAAAGCGAGCGCGAGCAGCGGTGGCAGCGGCGTGCG
GTCGGCGGCCAGCCGGCAGCGGTGGTCTTCAAATGCATAAAGTTACCATT
GAGGTAAATACTGGGCTAGAGATTCCTGTTGAACTTTGGGGTTGATTTAG
TCCCAGTCCCGTTTCGGGTTCGAATTTCCCGCGGCCCGGCTGGCTAGCGA
TGTGTAAATATACACGAAGGAGTTACCGTCGAGGTGCATCGTTAGCCAAG
TCTGATGGAAGATACCAGACTTTGTGAGTGAGTCAATACTAGTAAGTGTA
AAATATATTATCTAGTCCTTGGTCAAGTCTCACAAAAATGAGGTGATTTT
TCGATGGCGATTTTTGCATCAGCCACCGTGAGTGAGGGTAGACAAATTGC
TTTATCGGGTTGTTGTGTAAAACACAATTTATTTTTTTACAATGTCACAA
TCAAAACAACGGCTGGTAGCTATGAAACAAACAAAAAAATGTAGTATTTC
ATCTTTATTTCGATTCCTCGATAAATCATATAAAGATTTGGACTACGCCG
ATCGGAATGGACGTTGAACCAATGGAAAAAATTAACGGAATGAAATGTGT
AGAACATTTTCATGGCGACAAAGTCAATTACGCCAATTATTTATTTTTGT
CTGGAGGGTGCAACGTGTCACCTCCGGGACAAATGTGAATAATTGGCATA
TTCACCACGAAAATGAAGAAATATTCGCCTGAGTTTCAGAATGAGCTCGT
GTATTGTGTGTGCCCCGGACCATCCACGACTGCTAATAATGCTCGTAAAT
CGAATGGACAGGGGCCGGTAATTTATTCTATGTGTTCGCTTGTTCTGAAA
CTCCGGCGAACATTTTTCATTCTCGTGGCGAATACGCGAAGTATTCATAT
TTTGTCCGGGAAGTGGAACGTTTTCGCCGAGATGATTTTTCTATCCATAG
TAAAGCCGGTTTTTCACCTACATATAGACTATTCGGTAAGATTAAAAACA
AACGAAAATCGTTGTCAAATCCATCGGAATGGCTCATTACAAACACGACA
AAAAATATGGTTGATTTTGACAGTAGATTAGGAAAAAAAAAGAAAAAAGT
AACTGTTACTGCTGTTTTTTTAGACCGGTCTTGAAACTGTGTCCTCTAAT
AATAGAGCAGACCGTTATAATATTGCAGTTGGCTGAATATTTCAACCGTT
TCTGACGGAAAAAGAATGTCCGACTGCTATCTTGCACCAGTTTGTAGGAA
CATTTCAAAAGAAATCGTTTTAAATTGATGATATATTCCAACCCTCGGAC
ACATACTAATACAAGAAATGGTTTAATACGAGAAACCAACCGTGGATACT
GTGTTCGTTGTGTTCTCCACCATCTGGATGCTCGGGAATATACTGGATAG
AACGTGCGTAATAGCACCCGGAAAACGAACTGCCGTACGGCGATTGTACA
TGTATTAGTGTTCCGAACGTGCATACACTACCCTCCAACCTTTGAACACT
CGGGGAAATACCGATGGGATATGCACTCTAGCATCCGGAAAACAAGCAGC
CGTACAGCGATTGTAATATGCATCAATTTTCCGAATGTGCATACTATCCA
TCTGCGTTCATGTGTACAATTCTCACGCGTATGCGCATGGTCTCTCTAGA
ATACAAAACATTAGACAGTTTAAAAAATATATATATATATATTTGCACTT
TGAGTAATGAAAATCTGAATAGCAAAGCCCCTTGAAAACTTCAGGAAGGG
GCACAAAAATTGAGTATCGAAGCTCGGATGATGTAGTCGGGGGTGTTGCG
CTGATTGGGTGTGTTTATTAAATGCATCATGTCGATCTGCTACAGTTTGC
AATGTGATCAGCGAGCAACTCGCCGTCAACATGCGTCCAGTCAGCATCAC
AGCAAATAAAGGCACGTGTGGTGCAGCCGATGGACATCTCAGAGCGGAGG
GATATAGAGACGTGGTGTTGTATTCGTCCTCAAATGTCAGTTGTAGTTTT
TCTTGTTGTCCTTCCTAGTGTAGAGTAGCTAGTTATGAAGAGGGAGTTCG
TTATGTTTGGCTTGCGCCGACAAGACTTGGTACCACATGAAATGGAAACA
TGGACGAACAATAATCATAGCACGCCAGAGAACCAGACATGCAAGCGCGA
CAAAAAAGGAGGGATGGAGATTATGGCGGACAGGCAATCCACTTGTAAGA
GCTGAGGTCTTGCGGCACGAGTCTCGTTGCTCCTCTCGACGCCAAAATTG
TGTCGTTCGTTCGTTTTGTTGTTGTTCTACTGTTGACAGAACTTCAGAGT
AGAGTAGTTTTGTGCGTGTGTGAATATCTGCAACAGCGCTTCTTGTGGGG
GGGTACTCGTGGGTAAATGAAAAAGTGTAAATAGGTCTAGAGTGGAACGT
TCTTGTCGATGATACAACTGCGAGTAGGTCCCAAGTGAAGTATTCATGTG
GATGAGTACGATCGTAATTAGGGTCCCTGATGGAGAACTCGTGTAGATGG
ATATACGTGACACAGCAAATTGTCAAAGGCCCGTTCGACCACAGACTGTA
TCTGTAACGTATTCGTGGTCACCAAAGATGGGTGATTACAGCGCTCAGAC
CGTTACGAATGCGCCATTCGTATTTGTCCGGGAGGTGAAACATTCAAACA
AATCCAGTTTTTAGGGGGTTTGATCCGTAAGCGGGGACCCTCAAATGACG
GTATTTTTTTTCTTTATTTTTTCCCGCCTTGTGATGACTGCTCCTCCTTG
TAAATAATTTCTTGTGTCTAATATTACCCTTGTTTGGGGCAAATTAGGAT
GTAATTTGTCCGAATTCTCTATTCGCAAAAGCGGCATATTTATTAAGACC
GAAAGATTAGTTATTGTATCTCACCGTACCAGTATGTAGCTAACGCGGTT
GCAGAGGTTGGGCAATCCACTTTGTACGTGTATGACGTATGTTATTGACT
GTTCCTAGGTGAGTGTCAACCTTACACCCGGATAAATACGAGTACTTGCA
AATTTGTATCGGTTTTCACAAAAAGCCGAAATAATTGGTATTGGCGTGAG
TTTCAAATGAGCGGACACATATAATGAAGTACTTACCCCTGTTCATACGA
TTTACGAGTATTATTAGCACATGAAAAAACAAAAACACGAGCTCGTTCTA
AAACTCAGGAAAATACGTTCATTTTTTTGTGAAAAGCATTTGCAAGTGTT
CGTATTTTTCCCGGGGGGTGAAACTATATCAGGTGAGCCCCAAAACTGTC
GTGAAATTGATCATAGAGACGATATTTGCAACTTTCTCCTGACTTGTAAT
TTTTGTTATGTCAAACATTAAATGGAAGTCGTTATGCGTTGATTTTGATA
TAGCATATTATCGCTTCTGGGTTAGTGCAGTGCATGTCGACTGAATTTTT
CCTCTAAATACTTTCTCGTATATTCGTGTTGGGTGGCCCCCTTACATCGG
GTGCACATTTCTATCGGTTGCTCTCGATCAGTCGTGGGATAAAAGTACAC
TTGTTGTGGACGGGCTCACCACGCCGGTCGGGTACTTCGGCGTGTTTTTC
TGTCGGAAGTTATTTTGCTCAGCTACGTAGGGTGAAATTGGGTCATATTC
AAGAAAGATTTTGCTGTAGAGTTGTACTCAACGGCCTATCCGCTTGTAGA
CTTGGCGTGTTCTTGGGGATGTGTCAGTCACCCCTAGGTGGCTGTCTTTG
TCGAAGCTGTTATTTTTCTCGAGAATACCTATCTAATGACATCATCGAAA
AAGCCTGCACGAGTGACAGGTCTCCACGGGATCTTGATGACGATAAGATT
TTGGTGTGTTCAGTACCACCTTATTTACAGAGAAAATCGAATGAATAGCA
TCGTACCGACGAGGGTGATACATGATGCAAACCGCGATATCTCGTCGCGA
GGACAGGCGAGTCACCAAGCGTTCCAAAGATAGTAACTGTTCTTCTTACC
GAACGGGTCACCCATGAATAATGACAAATACTAGTAATATTTAAAGACGC
TCTAAAATCCCGATATGTGGCCAATAATGCCACGGACAGCAATAGAGACC
TGCTTTACGTGAAAACCCCGACATACCCTGAAATGATTGCCAATACTCTT
TCTGTAAGCGTCTCGTAACGTCCTACTAAACCTTTTGAAACTGTCTATTT
TGTGTGCTGTGATACCCTGCATGGTGCCTGAACAGCACGGAGGGAAAACA
CACGAGCTTGAAGTGGCGGGGCGCCTTTCGATCCTTGAGGCTGCCCTGGA
CGAAGGGATTGACCTCCCACACGATTGCAAACTTGGCGTATGCCTGACCT
GTCCATCGATGGTGGTCAGCGGGGAGGTGGACCAGAGCGAAGGGACGCTG
GATGCAGCCGTCGTCGAGCAGGTTGGACTTGTGTTGTTTCAATGAAGGCT
TGTTGCATGCACATGTACGACGACGATGAATGATAAGGCGGTGACATAAA
GCACTAGTTCTAATGCAGTAGTAAAAAGAATTCACTTGGATAGCATCGTG
AAGATCAACGCACGTGCCAGCTCGGCGCAAACCCGAGAACGGCGCTCGGA
TGCCCTGTAATTGGACACAGCGCACGACGAAGTAGCAAGTGAAAACGTGA
TACAGTCGCACCTCAACCAGGCTCGACGGTGGCAGGTTGCGTACATCCAC
AACCGATCACAGAGTTACACTGAAGGGAAGCATTTTGCGGCTGAGGTAGG
GAATAAGATGTTGCGTCTAGTGCGTACCGCAGAAGATGCAGAGTTTTGTT
TCTTTTAATTTGTAAGCGTGAGTTTTTCCTGGTACTCATGAAAGCAGACC
TACAGGGGGAAACTCTTTCGTGTTTTTCTCCGTGGTTGATTTCTGCATTA
GGGTGAAGGAGAGCTGATGCACCCGCCCCGCGGTTGTGTGTATTTGGTTT
GACTTCGTCAGACAGAAGGGAGTTCGTTTTCCTCTAGTTGCTGGTGATCC
CGTATGTTGTGTTCGTGGTACTACGCTAGCGCTGCTCCTTTTATGTAGTT
ATCTAATGCACCCTCAGTCCCGCTTTGTTGGTGGTGTGGTGTGAGGAAAG
AATTATGTTGGAGGGTTTCTCGGCCGAACCTACTTTGATCTAGGAACCCG
CTGCGAGGATACACAACTACGCACAGCAGTAATTCAGTGGTTATACTACA
CTCATGAAGACACTGATCAAGTCGTGCTGTGTCACTATCATCAGACGGTC
ACTTCTTTTTCGTTTCCGAATTATATGGGTGTGTCTCCTTTTCACCCGAA
AGCAAAAATCGATACCTCCTCTGCCACCAACCTCTATATCCCCGCCTTCC
CTTGCATGTGTCGGACCAACCTACTCTCGACTTCTTTTTATTTTTTTTTG
CTCTTTTCGCAGGGATTTGCGCTTACTTGCTGCAGCTACCCCAAGTCAGA
CGTCGTCATTCGATCCGTTGAAGAGGATGAGCTCGTGGGTGCTCAATTCA
GCGATCGAACATAAGACATTCCACGTGGGCTACTATTCCTAGATAATGTT
GGAGAGGCTGCGCTGGTTATTTTGTGTTTGCCGTTGCCCGTCATGATTGT
GGAACGGTCGGGTTTTGCCGAATGTGATGCGGGCAGAGGAGGCACAGGGG
GGGGGGGGGGGTACGCTGTGTTAATCGAATGTGCTAATCATGCTGCTCAA
TTGACTGGCAAGTAACGGGCGGAGAGGATATTTACCATGGCCGCTTTTCC
CGCGACTGGTGGTTGAGTCACATTCCAGCCGTATCCATGGATGACTGCTT
GGCTGGATTTGATTGCATGGATGCACTTTCGATTGCTTCTCTACTTATAG
TGAATATCCCGTCATTTGTTTTGTGACCGACAGTTTTTTTTTCGCGGTGG
GGGAAAGCTCTTGTTCCTCTCTTTTTTGTGCAAGCCCTCTCTCCCTTTTA
back to topCoding sequence (CDS) from alignment at H-paniculata_contig3071:3564..14113+ >mRNA_H-paniculata_contig3071.8325.1 ID=mRNA_H-paniculata_contig3071.8325.1|Name=mRNA_H-paniculata_contig3071.8325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig3071:3564..14113+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATAAAGTTACCATTGAGATGCATAAAGTTACCATTGAGCACGGAGG
GAAAACACACGAGCTTGAAGTGGCGGGGCGCCTTTCGATCCTTGAGGCTG
CCCTGGACGAAGGGATTGACCTCCCACACGATTGCAAACTTGGCGTATGC
CTGACCTGTCCATCGATGGTGGTCAGCGGGGAGGTGGACCAGAGCGAAGG
GACGCTGGATGCAGCCGTCGTCGAGCAGCACGGAGGGAAAACACACGAGC
TTGAAGTGGCGGGGCGCCTTTCGATCCTTGAGGCTGCCCTGGACGAAGGG
ATTGACCTCCCACACGATTGCAAACTTGGCGTATGCCTGACCTGTCCATC
GATGGTGGTCAGCGGGGAGGTGGACCAGAGCGAAGGGACGCTGGATGCAG
CCGTCGTCGAGCAGGGATTTGCGCTTACTTGCTGCAGCTACCCCAAGTCA
GACGTCGTCATTCGATCCGTTGAAGAGGATGAGCTCGTGGGTGCTCAATT
CAGCGATCGAACATAAGGATTTGCGCTTACTTGCTGCAGCTACCCCAAGT
CAGACGTCGTCATTCGATCCGTTGAAGAGGATGAGCTCGTGGGTGCTCAA
TTCAGCGATCGAACATAA back to top
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