mRNA_H-paniculata_contig3067.8306.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3067.8306.1
Unique NamemRNA_H-paniculata_contig3067.8306.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: A0A6H5J8L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L0_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 4.980e-131
Identity = 196/244 (80.33%), Postives = 222/244 (90.98%), Query Frame = 3
Query:  198 SSFGKRKADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGE-RLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMTD 926
            SSFGKRKADDFLRRQE +MD  FKA+VV+PGDDVT  TTR TR+LRLGPGLVQ  + +++ATRAG+LRYRPP +YWVESNGRRY ARVEDQV+GIVEDRM ++Y+V+IFGSC ALLGMLEFDGASKRSKPNL++GSLVFCRV+A +KDME ELTCTSTHHGSKKDWMTGQSTFGEL GGKM+RCSLLL+KSLTKP+C VL SLAK+MPFE+ AGLNG FWVDS S +HTI+ICNAILNSEVMTD
Sbjct:   60 SSFGKRKADDFLRRQELAMDPRFKATVVLPGDDVTETTTRTTRSLRLGPGLVQHAQDKVLATRAGVLRYRPPCTYWVESNGRRYGARVEDQVLGIVEDRMADSYKVNIFGSCAALLGMLEFDGASKRSKPNLRTGSLVFCRVAAVNKDMETELTCTSTHHGSKKDWMTGQSTFGELRGGKMERCSLLLSKSLTKPDCRVLKSLAKYMPFELAAGLNGTFWVDSGSEAHTIVICNAILNSEVMTD 303          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: D8LG41_ECTSI (RNA binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG41_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 3.700e-122
Identity = 182/226 (80.53%), Postives = 205/226 (90.71%), Query Frame = 3
Query:  252 MDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGE-RLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMTD 926
            MD  FKA+VV+PGDDVT  TTR TR+LRLGPGLVQ  + +++ATRAG+LRYRPP SYWVESNGRRY ARVEDQV+GIVEDRM ++Y+V+IFGSC ALLGMLEFDGASKRSKPNL++GSLVFCRV+A +KDME ELTCTSTHHGSKKDWMTGQSTFGEL GGKM+RCSLLL+KSLTKP+C VL SLAKHMPFE+ AGLNG FWVDS S +HTI+ICNAILNSEVMTD
Sbjct:    1 MDPRFKATVVLPGDDVTETTTRTTRSLRLGPGLVQHAQDKVMATRAGVLRYRPPCSYWVESNGRRYGARVEDQVLGIVEDRMADSYKVNIFGSCAALLGMLEFDGASKRSKPNLRTGSLVFCRVAAVNKDMETELTCTSTHHGSKKDWMTGQSTFGELRGGKMERCSLLLSKSLTKPDCRVLKSLAKHMPFELAAGLNGTFWVDSGSEAHTIVICNAILNSEVMTD 226          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: T0R8U7_SAPDV (KH_dom_type_1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R8U7_SAPDV)

HSP 1 Score: 250 bits (639), Expect = 1.950e-74
Identity = 125/236 (52.97%), Postives = 167/236 (70.76%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGERLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMTD 926
            A++FL   E+S+D  FK + V+PGDDVT     +++ LRLG GL+  G  + +T AG+LRYRPP+ YW++ N +RY   V+D VVG+V DR  E YR+ I  S  A LGML FDGASKR++PNL+ G+LV+CRV + ++D+E  LTC +  H SKKDWMTG + +GEL+GG + + S+ LAKSL K +C VL++L K MPFE+ AG NG  WV+S S   TILI NAILNSE + D
Sbjct:    2 AEEFLLSTEKSIDLAFKPATVLPGDDVTKHIANLSQKLRLGAGLIANGNAITSTNAGVLRYRPPNRYWLDYNHKRYVPAVDDGVVGLVVDRNAEFYRLDIGASSYATLGMLAFDGASKRNRPNLQPGALVYCRVLSTNQDLEPALTCEAPSHMSKKDWMTGLALYGELNGGYVFKASIGLAKSLLKDDCAVLSALGKAMPFEVAAGFNGLVWVNSSSCHDTILITNAILNSEGLPD 237          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: A0A1V9Y536_9STRA (Exosome complex exonuclease RRP40 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y536_9STRA)

HSP 1 Score: 249 bits (637), Expect = 3.820e-74
Identity = 127/236 (53.81%), Postives = 166/236 (70.34%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGERLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMTD 926
            A++FL   E+S+D  F    V+PGDDVT     + + LRLG GLV  G  +  T AG+LRYRPP+ YW++ N +RY A V+D VVG+V DR  E YR+ I  S  A LGML FDGASKR++PNL+ GSLV+CRV + +KD+E  LTC +  H +KKDWMTG + +GEL+GG + + S+ LAKSL K +C VL +L K +PFE+ AG+NG  WV+S S  +TILI NAILNSE +TD
Sbjct:    2 AEEFLLSTEKSIDLAFTPVTVLPGDDVTKHIANLGQKLRLGAGLVANGSTVSCTNAGLLRYRPPNRYWIDFNHKRYVAAVDDGVVGLVVDRNAEFYRLDIGASSYATLGMLAFDGASKRNRPNLQPGSLVYCRVLSTNKDLEPALTCEAPSHMTKKDWMTGLALYGELNGGYVFKVSIGLAKSLLKDDCAVLAALGKAIPFEVAAGMNGVVWVNSGSCHNTILITNAILNSEGLTD 237          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: A0A067BU90_SAPPC (SET domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BU90_SAPPC)

HSP 1 Score: 248 bits (633), Expect = 5.370e-72
Identity = 124/236 (52.54%), Postives = 166/236 (70.34%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGERLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMTD 926
            A++FL   E+S+D  FK   V+PGDDVT     +++ LRLG GL+  G  + +T AG+LRYRPP+ YW++ N +RY   V+D VVG+V DR  E YR+ I  S  A LGML FDGASKR++PNL+ G+LV+CRV + ++D+E  LTC +  H +KKDWMTG + +GEL+GG + + S+ LAKSL K +C VL++L K MPFE+ AG NG  WV+S S   TILI NAILNSE + D
Sbjct:    2 AEEFLLSTEKSIDLAFKPVTVLPGDDVTKHIANLSQKLRLGAGLIANGNAITSTNAGVLRYRPPNRYWLDYNHKRYVPAVDDGVVGLVVDRNAEFYRLDIGASSYATLGMLAFDGASKRNRPNLQPGALVYCRVLSTNQDLEPALTCEAPSHMTKKDWMTGLALYGELNGGYVFKASIGLAKSLLKDDCAVLSALGKAMPFEVAAGFNGLVWVNSSSCHDTILITNAILNSEGLPD 237          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: A0A1W0A9P5_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9P5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.090e-71
Identity = 121/232 (52.16%), Postives = 165/232 (71.12%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGERLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSE 914
            A++FL   E+S+D +FK   V+PGDDVT       + LRLG GLV  G +++AT AG+LRYRPP+ YW++ N +RY   ++D VVG++ DR  E YR+ I  S  A LGML FDGASKR++PNL+ GSLV+CRV++A++++E  LTC +  H +KKDWMTG + +GEL+GG + + S+ LAKSL K  C VL++L + +PFEI  G NG  WV+S +   TILI NAILNSE
Sbjct:    2 AEEFLLSTEQSIDLSFKPLSVLPGDDVTTSIANTNQKLRLGAGLVASGTQVLATNAGVLRYRPPNRYWIDFNHKRYIPSMDDGVVGVIVDRNAEFYRLDIGASTYATLGMLAFDGASKRNRPNLQPGSLVYCRVASANQNLEPSLTCEAPSHMTKKDWMTGLALYGELNGGYVLKTSIGLAKSLLKDECVVLSALGRAIPFEIAVGFNGIIWVNSGTCQDTILITNAILNSE 233          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: A0A6G0XI83_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI83_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.280e-71
Identity = 123/233 (52.79%), Postives = 165/233 (70.82%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGE-RLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSE 914
            A++FL   E+S+D  F     +PGDDVT   T +TR LRLG GL+   + R+V T AG+LRYRPP+ YW++ N +RY   V+D VVG++ DR  E YRV I G+  A LGML FDGASKR++PNL+ GSL++CRV  A KD+E  +TC +  H +KKDWMTG + +GEL GG + + S+ LAKSL + +C VL +L K +PFE+  G+NG  W++S+SN+ TILI NAILNSE
Sbjct:    2 AEEFLISTEKSVDLAFTPRTCLPGDDVTQHITNVTRKLRLGAGLIADDQNRVVCTNAGVLRYRPPNRYWIDFNHKRYLPSVDDGVVGMIVDRNAEFYRVDIGGAAHATLGMLAFDGASKRNRPNLQPGSLIYCRVLRAAKDLEPCVTCEAPSHLTKKDWMTGLAIYGELIGGFVFKISIGLAKSLLEDDCVVLTALGKSVPFELAVGVNGVVWLNSKSNADTILITNAILNSE 234          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: W4FDB9_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDB9_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.620e-71
Identity = 123/236 (52.12%), Postives = 167/236 (70.76%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGE-RLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMT 923
            A++FL   E+S+D  FK    +PGDD+T   T +T+ LRLG GLV   + R+V T AG+LRYRPP+ YW++ N +RY   ++D VVG+V DR  E YRV I GS  A LGML FDGASKR++PN++ GSLV+CRV  A KD++A +TC +  H +KKDWMTG + +GEL GG + + S+ LAKSL +  C VL SL + +PFE+  G+NG  W++S+S+  TIL+ NAILNSE +T
Sbjct:    2 AEEFLLTAEKSIDLAFKTRTCLPGDDITQHITNVTQKLRLGAGLVATTDNRVVCTNAGVLRYRPPNRYWLDFNHKRYTPALDDGVVGMVVDRNAEFYRVDIGGSSFATLGMLAFDGASKRNRPNMQPGSLVYCRVVRAAKDLDACVTCEAPTHLAKKDWMTGLAIYGELTGGYVFKASIGLAKSLVQDECAVLESLGRAIPFELAVGVNGVVWLNSKSSQDTILVANAILNSEGLT 237          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: A0A485LHG2_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHG2_9STRA)

HSP 1 Score: 241 bits (615), Expect = 6.420e-71
Identity = 124/236 (52.54%), Postives = 163/236 (69.07%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLV-QRGERLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMT 923
            A++FL   E+S+D  F     +PGDDVT   T +T+ LRLG GLV     R++ T+AG+LRYRPP+ YW++ N +RY   V+D VVG++ DR  E YRV I  S  A LGML FDGASKR++PNL+ GSLV+CRV  A KD++  +TC +  H +KKDWMTG S +GEL GG + + S+ LAKSL K  C VL++L   +PFEI  G NG  W++S++N  TILI NAILNSE +T
Sbjct:    2 AEEFLVSAEKSIDLAFTPRTCLPGDDVTQHITHVTQKLRLGAGLVADNNNRVLCTQAGVLRYRPPNRYWLDFNHKRYLPSVDDGVVGMIVDRNAEFYRVDIGASSYATLGMLAFDGASKRNRPNLQPGSLVYCRVVRASKDLDPCVTCEAPSHMAKKDWMTGLSIYGELTGGYVLKASVGLAKSLLKDECVVLSALGTSIPFEIAVGFNGIIWINSKTNQDTILITNAILNSEGLT 237          
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Match: A0A024TLH3_9STRA (Ribosomal RNA-processing protein 40 n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLH3_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.540e-70
Identity = 122/236 (51.69%), Postives = 168/236 (71.19%), Query Frame = 3
Query:  219 ADDFLRRQERSMDSTFKASVVIPGDDVTAKTTRMTRTLRLGPGLVQRGE-RLVATRAGMLRYRPPSSYWVESNGRRYCARVEDQVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFCRVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAKSLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSEVMT 923
            A++FL   E+S+D  FK    +PGDD+T   T +T+ LRLG GLV   + R+V+T AG+LRYRPP+ YW++ N +RY   +ED VVG++ DR  E YRV I  S  A LGML FDGASKR++PNL+ G+LV+CRV  A KD++A +TC +  H +KKDWMTG + +GEL GG + + S+ LAK+L + +C VL +L + +PFE+  G+NG  W++S+SN  TILI NAILNSE +T
Sbjct:    2 AEEFLLAAEKSIDLAFKPRTCLPGDDITQHITNVTQKLRLGAGLVATCDNRVVSTNAGVLRYRPPNRYWLDFNHKRYKPALEDGVVGMIVDRNAEFYRVDIGSSSYATLGMLAFDGASKRNRPNLQPGTLVYCRVVRATKDLDACVTCEAPSHLAKKDWMTGLAIYGELVGGYVLKTSIGLAKTLIQDDCIVLEALGRAIPFELAVGMNGVVWLNSKSNQDTILIANAILNSEGLT 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3067.8306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8L0_9PHAE4.980e-13180.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG41_ECTSI3.700e-12280.53RNA binding protein n=1 Tax=Ectocarpus siliculosus... [more]
T0R8U7_SAPDV1.950e-7452.97KH_dom_type_1 domain-containing protein n=1 Tax=Sa... [more]
A0A1V9Y536_9STRA3.820e-7453.81Exosome complex exonuclease RRP40 n=1 Tax=Achlya h... [more]
A0A067BU90_SAPPC5.370e-7252.54SET domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A1W0A9P5_9STRA1.090e-7152.16Ribosomal RNA-processing protein 40 n=1 Tax=Thraus... [more]
A0A6G0XI83_9STRA3.280e-7152.79Ribosomal RNA-processing protein 40 n=1 Tax=Aphano... [more]
W4FDB9_9STRA3.620e-7152.12Ribosomal RNA-processing protein 40 n=1 Tax=Aphano... [more]
A0A485LHG2_9STRA6.420e-7152.54Ribosomal RNA-processing protein 40 n=1 Tax=Aphano... [more]
A0A024TLH3_9STRA2.540e-7051.69Ribosomal RNA-processing protein 40 n=3 Tax=Aphano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3067contigH-paniculata_contig3067:7210..16370 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score376.7
Seed ortholog evalue1.1e-101
Seed eggNOG ortholog2880.D8LG41
Preferred nameEXOSC3
KEGG koko:K03681,ko:K14684
KEGG TC2.A.29.23
KEGG Pathwayko03018,map03018
KEGG ModuleM00391
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000175,GO:0000176,GO:0000177,GO:0000178,GO:0000184,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000785,GO:0000956,GO:0001775,GO:0002164,GO:0002200,GO:0002204,GO:0002208,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002366,GO:0002376,GO:0002377,GO:0002381,GO:0002440,GO:0002443,GO:0002449,GO:0002460,GO:0002520,GO:0002562,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006310,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006955,GO:0007275,GO:0008150,GO:0008152,GO:0008298,GO:0008408,GO:0009056,GO:0009057,GO:0009791,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0016064,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016444,GO:0016445,GO:0016447,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019219,GO:0019222,GO:0019439,GO:0019724,GO:0022613,GO:0030097,GO:0030145,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031325,GO:0031329,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034427,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0035166,GO:0035167,GO:0035327,GO:0042113,GO:0042254,GO:0043144,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043487,GO:0043488,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045006,GO:0045190,GO:0045191,GO:0045321,GO:0045830,GO:0045911,GO:0045935,GO:0046483,GO:0046649,GO:0046700,GO:0046872,GO:0046914,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048534,GO:0048542,GO:0048569,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051054,GO:0051094,GO:0051171,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0051252,GO:0051641,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0070013,GO:0070478,GO:0070481,GO:0070651,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071031,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071049,GO:0071051,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1903311,GO:1905354,GO:2000026
EggNOG free text desc.nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription
EggNOG OGsCOG1097@1,KOG1004@2759
Ec32 ortholog descriptionRNA binding protein
Ec32 orthologEc-11_002030.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000,ko03019
Exons8
Model size2188
Cds size990
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3067.8306.1prot_H-paniculata_contig3067.8306.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3067 7224..15186 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929942.6558778-UTR-H-paniculata_contig3067:7209..72231622929942.6558778-UTR-H-paniculata_contig3067:7209..7223Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3067 7210..7223 +
1691481079.7574565-UTR-H-paniculata_contig3067:7209..72231691481079.7574565-UTR-H-paniculata_contig3067:7209..7223Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3067 7210..7223 +
1622929942.8163955-UTR-H-paniculata_contig3067:15186..163701622929942.8163955-UTR-H-paniculata_contig3067:15186..16370Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3067 15187..16370 +
1691481079.8378503-UTR-H-paniculata_contig3067:15186..163701691481079.8378503-UTR-H-paniculata_contig3067:15186..16370Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3067 15187..16370 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929942.673992-CDS-H-paniculata_contig3067:7223..73241622929942.673992-CDS-H-paniculata_contig3067:7223..7324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 7224..7324 +
1691481079.7670832-CDS-H-paniculata_contig3067:7223..73241691481079.7670832-CDS-H-paniculata_contig3067:7223..7324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 7224..7324 +
1622929942.6911507-CDS-H-paniculata_contig3067:9977..101781622929942.6911507-CDS-H-paniculata_contig3067:9977..10178Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 9978..10178 +
1691481079.7745109-CDS-H-paniculata_contig3067:9977..101781691481079.7745109-CDS-H-paniculata_contig3067:9977..10178Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 9978..10178 +
1622929942.7048256-CDS-H-paniculata_contig3067:11081..112911622929942.7048256-CDS-H-paniculata_contig3067:11081..11291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 11082..11291 +
1691481079.7821805-CDS-H-paniculata_contig3067:11081..112911691481079.7821805-CDS-H-paniculata_contig3067:11081..11291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 11082..11291 +
1622929942.7238963-CDS-H-paniculata_contig3067:11610..116771622929942.7238963-CDS-H-paniculata_contig3067:11610..11677Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 11611..11677 +
1691481079.7916813-CDS-H-paniculata_contig3067:11610..116771691481079.7916813-CDS-H-paniculata_contig3067:11610..11677Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 11611..11677 +
1622929942.7393486-CDS-H-paniculata_contig3067:13057..131271622929942.7393486-CDS-H-paniculata_contig3067:13057..13127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 13058..13127 +
1691481079.8031466-CDS-H-paniculata_contig3067:13057..131271691481079.8031466-CDS-H-paniculata_contig3067:13057..13127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 13058..13127 +
1622929942.7597568-CDS-H-paniculata_contig3067:13672..137961622929942.7597568-CDS-H-paniculata_contig3067:13672..13796Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 13673..13796 +
1691481079.8129175-CDS-H-paniculata_contig3067:13672..137961691481079.8129175-CDS-H-paniculata_contig3067:13672..13796Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 13673..13796 +
1622929942.7737987-CDS-H-paniculata_contig3067:14368..144451622929942.7737987-CDS-H-paniculata_contig3067:14368..14445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 14369..14445 +
1691481079.8214216-CDS-H-paniculata_contig3067:14368..144451691481079.8214216-CDS-H-paniculata_contig3067:14368..14445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 14369..14445 +
1622929942.7862608-CDS-H-paniculata_contig3067:15046..151861622929942.7862608-CDS-H-paniculata_contig3067:15046..15186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 15047..15186 +
1691481079.8293562-CDS-H-paniculata_contig3067:15046..151861691481079.8293562-CDS-H-paniculata_contig3067:15046..15186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3067 15047..15186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3067.8306.1

>prot_H-paniculata_contig3067.8306.1 ID=prot_H-paniculata_contig3067.8306.1|Name=mRNA_H-paniculata_contig3067.8306.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp
MSSGYGGRLGVPEVDNDGMEIDTEEDARRDRNNRPPSDGQIKDEELEEGS
EGDSDAPEDGESSFGKRKADDFLRRQERSMDSTFKASVVIPGDDVTAKTT
RMTRTLRLGPGLVQRGERLVATRAGMLRYRPPSSYWVESNGRRYCARVED
QVVGIVEDRMGENYRVSIFGSCPALLGMLEFDGASKRSKPNLKSGSLVFC
RVSAADKDMEAELTCTSTHHGSKKDWMTGQSTFGELHGGKMQRCSLLLAK
SLTKPNCTVLNSLAKHMPFEIVAGLNGAFWVDSESNSHTILICNAILNSE
VMTDQQTDAMVNHLAKHLKKELRDDGDKH*
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mRNA from alignment at H-paniculata_contig3067:7210..16370+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3067.8306.1 ID=mRNA_H-paniculata_contig3067.8306.1|Name=mRNA_H-paniculata_contig3067.8306.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9161bp|location=Sequence derived from alignment at H-paniculata_contig3067:7210..16370+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTGAAGTGAAAGTATGAGCTCGGGATATGGTGGAAGGCTGGGGGTACCA GAGGTAGACAACGATGGCATGGAAATAGATACAGAAGAAGATGCAAGACG AGACAGGAACAACAGGTGACACAGTTTGGGTACGAGTGTCGCGTTGTGGT TGACTCTGGTGTAGGGCGATCGCTAGTGTATAGCAGGTGGGGTAGTGTGG CTGTCGGTAGCAAACGCAGCAGATTGAACGCACCTCCAATCTATCTACTC TGTTTGCTGTTGGCGAAGTGAGATAGATGTATGCAATGGATTAGAATATT GCTGCCTGTCGTGAATTTTTCGCCTTTGGTCAACCTGCAGCTGAATTGCA GTGGTGACTGTGGCGGGAAAATTGATGGTGATGGATCCAATGGTAATAGA AAACCCGCAATATACAGCATACAGCGCCCATCCCAGGCAACAAAAGGCAA TAGGTACATACATACCTCCCGACGAGGGGATGCTTCGCACGCGACCCGGA TCACAACTTTCTTGTGGATTCGACTGATTAGCACAGCCTCTGCTAAATAT TTCAGCAAGAGTTTGTTGACGAAAACCAGACACCAAATAATGCTATTGCA GCCTCGCCTCGTGTCTTAAATTGTATTTAGTACAGAGGCGAACATGAAGC GGATGGAGGATCACGGCAAAGAAACACCCCCAGAAGTAACTGTTTACAAA CCTCGCCAGATCTACACCGAAGGGTGAACGGTGATATTTTACATAATATC TAGATCTAAAAATGACATATTTCTCCCCCAATATTTATCAACAATAGGAC ATACAGACAGTGCAGGCTCTTGTTTCCCCAGAAAATTATGCCGCAAGACA ACGTCTGTGTTGTTGCATTTGAGTGTGGCGAGCAGCAGAATTTAGAGTTT ACCAATTTAGTGTAATATGCAAACTCAGCATATTAAGGGATTTATCAAAG TACCAGAAACGTTCTGACCGGGGACGGCCCTGACATGCGTCCCAAACACG GTTGCTCACAGACCGTGACGAAGGCGCCGATACGAGCTCTACCAACGCAC GCCAGGCCTAGGGGATGGGGGTTGGGGATAGAGCCAGAGGTAGAGTACGG CATTGATTCTGCTCGAGTGGGGGCATCACTGAAAAAGAACAAGAAGGACC GTCAATCGTTTTATTTTTGGAAAATTAGGTGAAACGGGCTGCTCGCTGGA AACTATTTTTCGTAGCTAAAAAAAGTTTATTTTTGCTGATGGGAGAGGAC AAGATGATCAAAGGCATAAAAGGCGGTAGTCTGGATCTTGTTGTCCCGCA TCCATCCTACCAGGTATATCGCATCGCGAGACAACTGTGAGAAAACAGTA ATCATGTTCACTAATTGGCCGAAAATAGTGTTTGACTGTACAAACTCAGC ACAGTAGCACATGCAAGAGTCATCATAACGTCACTCTCCTGAGCCGGGCC GGACCGTGCGCAGTACCGATTTGGCGCCGTTTGGCTGGCGTCGATATGAG CTCTGCCAATGTACACTATACGCAGGGGGTGAGGGTTAGGATTAGGATTA CCGTCGGTTCCAGCGTTCGTTCTGCTCGCGTCTGTGCACCACAAAGCGTG AACCATGAAAGAAAAGAACTGCCAACCATTGTGTTCGACTAAGTGGTAAA CAGGCCTCGGGTGACGCGCCTGTCCCTCACTTGACCTCGCGGCAATCCCT CACCAAGCACAGTGAGAACAGAGATTTGAACACAACAAGTTAAAAGTCGT GCCAAGACACGTGCCTTCCTCTTCGGCTATCACACCTATCCGGTTGATTC AGGTACCGGTGATAGGCTTGTTGGGAGCGTCCCGTTTATTCTGCGTCATG AACAACAGGTACACACACACTCGGTCGTCTGCGTTTTGCTCTCTTCTCGC GCATTCTCGCAATCAAGCCGTAGGCGCGGCAAACATTCCAAATGTCGTCA CAGCTCAGTACCAGGATCCGTATTTTGGGAGTACAAATTGGTGGTACCGG GAGATAACCAGTATTTCGGGGAATTGTACTGCTGATACGGGAGATGTACT CGCTATTTTCGAAGTGCGGGCTGGCGACGTTGCGTCATCACAGGATTTTG CCAGGAAGTACTGGAGATATACTCGATATTTTAGAGGGTACATATTGGTG AAGCTGGTGTATATCCAGTTTGACATAGCCCCGAAATTATACTAAGTGCG TACTTCGATGTTGGGATAATGGGGAAAACTGACAGTAACCGGGATTGATG CTCCCGAATTAGTAAAGCCGGTAGCTCGTAGGCAACCGGGTTACACCAAC ATTTCGTAGTAATTCCTGAGTAAAAACCTGGTATTTGTAGAGGACACACA CTGGTGGTACCGGCGTATACCCAGCTCTTTTCCGAGTATATACTGCGCAA CTGAGTTATCCTAGTATTTTTCCGGAAAGTGCTGGAGGTATACCCAGTAT TTTCGGGAGGCGATACCGTTGATAGTTGAGATTACGCTTTGTTTTCTATG AGGGCTTGAGCTGGTACTACATACACATACTCTGGTCGTGGATGCGGCCA GTAACTTCACAGTATCCAGTGTACGCACTGTGCTGTGACGACCTTTGAAA CATTACTTTCCACCAGGAAAGGGATTAAAAATGTTATTATCCATGCCAAC GACGCGAAAGAGTATCTCAGCATCTCTTTCTCTTGATTTTCGTTTGGGCG GACATGCCTAATTCCAAACTCTCCGCCCGCTCTCTACGTTTTCCTTTTTT ATTACCGCTCCAAAGCAGGCCTCCAAGCGACGGCCAGATCAAGGATGAAG AACTAGAAGAAGGATCGGAGGGGGACAGCGATGCGCCAGAAGACGGAGAG TCATCATTCGGAAAGCGAAAGGCTGATGATTTTTTGCGCCGTCAAGAGAG AAGCATGGACTCGACATTCAAGGCGTCCGTCGTAATACCAGGAGATGATG TCACCGCGAAAACGACCAGGTCTTTATCGATACTATATATAGAGAGATCT ATAGCTATATAGCTAGAGAGAGAGAGAGAGAGAGAGAGATGCGCAGATGC ATCGTGGGTGTGGAGCTTTCAAGTATGAATAAAGCTGTTTATTCGGGGTG GAAGGAGATTGCGAGGAGGTCAAATTTGGTGTGTGTTGGCGTATTCATGT GAGTCGGATTTCGTGGAAAAAATTGATGTGCTGGTATTTTGTTGTAACAA ATGAGGTTTAATCGAGTCACTCCACCCGTTGTCTACAGCTTATTTTCCGT CATGGTACGTTGCGTTTCAAACGAGCTGTAAGCGTATTTCAACGAAATCG TAGTTGTGACTTGATTAAATATACATGATCGAGTTTTGTTGTTCGATAGA AATACGTATCAAAATTGCAACTCGACCTGTGTGATCAGACAGCTGCAGCC AGTCCCGCACTGACAAATATCATACACAGCACAGACGGGAAGTTGGCATG ATCCTGCTTACCACGACTGCAGCGTTCGACTTTTGTAGTTAAATTGCAAT TTGTCCCGAAACATCCTAATGCTCCCGAAGGGGTTAAACCCGAGAAGTTT TCAAGTCGACCTATTTGCAAGCATCACCTATACACCCCCAACCTACGAAA ATACGGATTTTATTTTCAAGCATGTATACCCATACACATTACCGCAAACG TCGCGCGTACTGGTGGTCGGTAAGTATCAATTTTGGAAAGTATATTACTC GCCTAGAGGGTAAAGGTATTGACCGAGGTGCACTGAATACACCGTAGTAA TTAGACCGTTTGCCTCTCCCCCATTTTTTTCATGCTAGAGCTACGCTATT GTTCGCAGTTTCCTAAACTTCAGTTGCCGGTAATGTACATGCACCCGTGC TCGAAAAAACAAATGACGACAGGATGACGAGGACCCTGCGCCTGGGTCCT GGACTCGTGCAGCGCGGAGAGCGTCTGGTCGCCACGCGGGCCGGCATGCT GAGATATCGGCCACCGTCCTCCTACTGGGTGGAGAGTAACGGGCGGCGGT ACTGTGCCAGAGTGGAAGATCAGGTGGTGGGGATCGTGGAGGATCGGATG GGGGAGAACTACAGGGTCAGCATATTCGGCAGGCACGTGGTGGTACAGTC GCAGTGCCAATAACAAAAGCCTGATATACTTCACCGCCAACCGGCTTCGA ATTACAAGTAGGCAGAACCGAACGCGAACAACCTGTAGAAGGTTTAACAT TTCGCAGAACCGACTGTTGACCGGGTTGAATCAGACAGGCCGATTGCGAA ATAGTTCTTGTTTTGGCCATGTACAACAATCGTGTGAAATATCGGTCATA TCAAGCAAGAAACTTTGATTTTTTTCCCTTCCCGTGCGTGTGTTTACCCT TTGCTTTCATGATGGTCTACCAATGGGCCCATTATGTCGCACGGTATTCA GCTGTCCTGCATTGCTCGGTATGCTCGAGTTCGACGGCGCGTCTAAGCGA AGCAAGCCGAATCTCAAGGCAAGTAAAAACATTGGGTAGGGGCAATGAAC TGGATAAGGCATACCTACCTCCTCGTTACTGGACAGTGTTGGGTACAGGG GGCAGCGATAACTTTCTCGCGTAGTCATGCTACGTTTGGTCATTATTTTG GGTGTCTCGTCATCACAGACGTACCCAACACTAACCCATTATTGTTTTTT TTACTTTGTGTGTGACCCAAGTTCCGCGTTGAGGCACCTTGCCCCGCGAA GAAAAATCGCTTTTAAGCCTTGATCGTGCGCTCCACGACTACCTGCGGGT TTTTTTCCCCAAGATAAAAAGGCTCCGCGTGGGCTACAGAGAGGTAACTG TCGCGTGGGTAGCACGTTGTACGACTGTCAACCACCTAGCTTGTAGTTGG CGCGACAGTTACCTCTCTGTATTGGTGTACCGGTATCGACTTGTGGTACT TCGGATAGGTGGCCATGAGGTAATCTTGAGCATCAGGATGAGGAGTGATG ATGACAGTAAATAAAGTGCGTGATAGACCAGGCCGGCAGAGCCTTTGTAT GCGCGAGTAAAGAAAGATACCGGGGCCAACTCTTGTTTCGCTTGACCTAT GGGGTTAACCTTACTATAAATAATGACGATGACTGTGTTGCCAATATCAA TGGGAACATTCCACCCCCCGAGACCAATGCGAATACTTGTAGAGCATTTG GGATGAGAGTGGAAGAAAATAAAAACCGTAATTGCCTGAGTTCCTGGATG TGCGGGCACACATCGAATATATATATATTAACCCCTGTCTATTCTAGTGG TTTAATTACTTGGTCGGAGCAGTCGTAAAAGGTCCTTCCGGGGAAACATA AAATAATCCCGTGGCTCATACTGAGCCTGCCTGTAGAGGCACATACTTTT CAAATTTCATCGCGACTGCTTTCAGTATTCGTATTCGTCTGTATTTATCA GGAGGGGGGGGGGTGCAGCATTCATACCGTTCACGTTGCCGACCCCAGAG TGGATGCGACAAGGTAGTGCCAGTGAGTGTCCAACATTCGGTGCAACAAA ACGGGACGGAGTCGGCAAAAAGTGGACAGGACAAGTCGCCGCCCAACTCG AGTAGAGTAAAAACAGTGAATCTCCCAGGTTTGTTTGGCAGAATCCGCCA CAGAAGACCTCTGTGGCACCACGCGCTAATTTCCGGAGCGCGGCTACATG CTACATGCCGTTTCGTTTCGGTTTGCTCAACAGAGCTCTCGGGCTTGCGG AGTCTGCATTGTTAACTGCATATATATATATTTATTGTGTACCTGCGTGT GCGTTCTTTGCCTCCATGATGTTTATTCTCTACTGGGTTTGACATGTCAT GATGATGATATCCTTAACGCGGAACCGACGGGCTCACGGAGGATGCAGAG CGGCTCGCTGGTCTTCTGCCGAGTGTCTGCGGCGGATAAGGACATGGAGG CGGAGCTAACGTGCACATGTGAGTGAAATATGATCCCCTGCGTCGTTATC CCGAACCGGATGTGCCATGCGTCTGTATGAAACATTAGGGGTGAACGGCA GGAGGGGAGTAACACATCTGCACAACGCTACAGGAATCGGTCAATAACGC AACGTCTAAAGCGGGGACATCATGGTTTGGAAGCGGCACTCAATCACACA CATGCTGCTGTGATGTACTGACTACTGATTGTAGTTGAATATAAACGCTA CAGCCGAACCGACATCTGAATTATCATTAGCAGTGTGGTGGTCGGCAGCG AATATAGAATGTATGGCAGATGTGTCATGCTATGGACCAATTATCTCGAG AGGCAAAAATTGCCGAGAGAAGCACGAACCGTGATTTCTTCTCGCGAGAT GCCAGTGTCATTGAGTTTTGTCTTGTTTATCTCTCTTATTTATGATAAAA AAAAAACTCAAAAAAAAACAACCGGAAACACACCTCATTTCGTTTTTGCC TGATTCTGCGCTGCTAAACCCCCCGAACGTTGTTCTACCTTGTGGCACAC ACTTGGACGCCAGCCACGCACCATGGATCTAAAAAGGACTGGATGACAGG ACAGTCAACGTTTGGAGAGCTACACGGCGGCAAGATGCAGCGATGTTCTC TGCTTCTCGCCAAAAGTCTCACCAAGCCAAACTGCACGTGCGAAACAAAA CATATAAGCTTGTTATCGTAATATTGAGCACGGCTGGTGTGCAACACTTT CGAGTTCCACGTCGTCGTATCTTTGGTCGTTTTTTTCTTGTTTCGGTTCA AGTAAGACAGCAAGAAGAGTAGTACCTACGTGCCCGATTAGTTCCCCCTG CAGCATTAAAGATAAAAAATTGCTAATTGGTCGCGCAGACAGAGTGCTTT GACGATGTGACGCGAGTGGCGGCAAGAAGTGTTTCACTGTTGCTTTCTTA GTGTGCGACGATATTGCTCGTTCGATTCTCGTTCCAGGCATTGTAAGCCC TGCGATGCGGCATATATTAAACGTAGCGTTATTATAATCAACACCACAAC AATTGACATCTGATCATTTGTTTCTCCGTGCGTGCACACGGCCTACGGGT TTTCGGTGTCGCAAGATTCTTCAAAATCGAGTTTGACAAGACTTCAACGA AAGGCTGGACAACGAGAGTACATAAAATACACCCCTGTAAAGCTATGACA ATGCCTGAGTGCACCGCCCATATCCCAACCACGACACCCGTCCTCTCGCC GACGCACAGGGTCCTGAATAGCCTAGCCAAACACATGCCGTTCGAGATCG TCGCGGGTCTGAACGGCGCGTTCTGGGTCGATTCTGGTGAGACCTGGGGG CAGAGAGTTTGGGGCTGAGGCAAAGCGTGTATATTTATTTTGAATAGGAG GCCATATGATCTGAGTTCCGATGTGTGAGACATTGCACATGTGACTTCGC CCGTTAGTCTGAGCTCCTCAGGTACATTGTTGTTGCGTGTTCAACCATGG TTATGAGAGTCGCCACCCTGCATATGATTGTGCCAATCCGTAGAGATAAA AGCGGTAGTGCTGCTATCCGGTAAAGTGGTGTTTTCTTGTTTCGATTGAT TTTCGAAGCGCTGAAGAGACCGACCCCTCAGAAGACCAGTCAATTGTCTG GTGCTTATGAGTTGATGAAGGTCAATCAACACTCATTGTCTCGATAGTTT TCTTTCGGTTGGTGATTGCGCACTCAGTTCGGCTCACTCCCCCTAGCTTT CCATTTATTTTTTTTTAATTTTGTTTTTCTCGACGGCTCCGTTTTCCTGT GCCCTTCTCTTTCCTCTCCATGGAACAAAAACACAACTAACAACAACAAC AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAACAACAACGACAACAACAACGAACAGAGTCGAACTCGCA CACGATCTTAATCTGCAACGCCATCCTCAACTCGGAAGTCATGACGGACC AACAGACGGACGCTATGGTGAACCATCTAGCGAAACACCTCAAGAAGGAG CTACGTGATGACGGCGACAAACACTAGATTAGCGGCCTTTCCCCTCTGCC CTCCGTTGAAATGAGAAGGAGCCAGGTCAGTCAGTGCAGGAGTGAAAATG TCGCCAAGGAAGGAATTCCAAGCCAAGTGCTTCCGAGAGAGCCGAATTCT TCCAATTTTGCGCGAGCTGCATTTGTGTTTGCTGGCGGATGTGATACCAG TTTGGTTAAACGAATGCGTGCTGGAAGATGACAGTACGAAAGGCAGTGCA GGGAGCAATATAGTTTTGGTCATAGTTGTTTTTTTCTCCGACAAAGTCAA CAGACTTGCCGCCAAGGGATCGGAATCCCCACATGCCACATGGAAGGAAG CGCAAGGAGCAATGCTATTTTGTCCAATTGGAGAATTAAACGCTTCGAGA CGGAGGCGTGGAGCGGCAATTTAATTTTCAGCTGGTGGGAGATTTTTGGC GATTTTATCTTGGGATCTTCCAATTGCTGGCTCACTCGATTGATGGGCAC TACTCGAGGTGATCAGGCCTTTGATGGTTGTAGTGTTGTTACCAGGCACG GAGCACGGGAAGATAGTGGCATCAACGAGTCCTCGTTGTAGCGCAAGTGC TATCTCGATCAACTTGTTATATCCATGAGCTGAGTGTACATATGCGAATG CTCCAGCAGTGATGACTAGAAAGACCCGAGCTTAGTGGGGTCCACTGGAA CAATTATACCAAGTCCAGTGGACTGAATAGGGTTCATACCCTCGTTTTTG GACAGATTTCGTTATGGTGCCAGCGACAGCTTAGTGTCTTACAGTGACGC TGCTATGGTCCCACGTTTGGGGGTGTCATGACAGGCGAGTCGATCGCTTT CCCATCATTGTTTTTGCTACAACTTGAGGCAACCCGCCTAGCGGAGGAAT AGCATTTTCTCGTCACAAGAATGCGCTTCATGTCCATCAGAAGGTTTGTG TTGACATATCAAACAGCTCGGCGTACGCTACAACAGGCCTTTGACCTGCT CACAGCGGCAGCATGTTGTTGATTGGCTTTTACCCGGGGTGATAACTATC TGCCTGTATTGAATGCTGGTCCTTCGGATACGTCATACCTAGTCAGTTAA ACATTGGGATGAAGAGTGGTGGCGACAGGCTAGGATAACAAAGGCGATTG CGTGCACGAGTAATAAAGGAAGATCCAGGAGAAATTTCGTCTGCATGATG GATCGAGTTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig3067:7210..16370+

>mRNA_H-paniculata_contig3067.8306.1 ID=mRNA_H-paniculata_contig3067.8306.1|Name=mRNA_H-paniculata_contig3067.8306.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at H-paniculata_contig3067:7210..16370+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCTCGGGATATGGTGGAAGGCTGGGGGTACCAGAGGTAGACAACGA
TGGCATGGAAATAGATACAGAAGAAGATGCAAGACGAGACAGGAACAACA
GATGAGCTCGGGATATGGTGGAAGGCTGGGGGTACCAGAGGTAGACAACG
ATGGCATGGAAATAGATACAGAAGAAGATGCAAGACGAGACAGGAACAAC
AGGCCTCCAAGCGACGGCCAGATCAAGGATGAAGAACTAGAAGAAGGATC
GGAGGGGGACAGCGATGCGCCAGAAGACGGAGAGTCATCATTCGGAAAGC
GAAAGGCTGATGATTTTTTGCGCCGTCAAGAGAGAAGCATGGACTCGACA
TTCAAGGCGTCCGTCGTAATACCAGGAGATGATGTCACCGCGAAAACGAC
CAGGCCTCCAAGCGACGGCCAGATCAAGGATGAAGAACTAGAAGAAGGAT
CGGAGGGGGACAGCGATGCGCCAGAAGACGGAGAGTCATCATTCGGAAAG
CGAAAGGCTGATGATTTTTTGCGCCGTCAAGAGAGAAGCATGGACTCGAC
ATTCAAGGCGTCCGTCGTAATACCAGGAGATGATGTCACCGCGAAAACGA
CCAGGATGACGAGGACCCTGCGCCTGGGTCCTGGACTCGTGCAGCGCGGA
GAGCGTCTGGTCGCCACGCGGGCCGGCATGCTGAGATATCGGCCACCGTC
CTCCTACTGGGTGGAGAGTAACGGGCGGCGGTACTGTGCCAGAGTGGAAG
ATCAGGTGGTGGGGATCGTGGAGGATCGGATGGGGGAGAACTACAGGGTC
AGCATATTCGGCAGGATGACGAGGACCCTGCGCCTGGGTCCTGGACTCGT
GCAGCGCGGAGAGCGTCTGGTCGCCACGCGGGCCGGCATGCTGAGATATC
GGCCACCGTCCTCCTACTGGGTGGAGAGTAACGGGCGGCGGTACTGTGCC
AGAGTGGAAGATCAGGTGGTGGGGATCGTGGAGGATCGGATGGGGGAGAA
CTACAGGGTCAGCATATTCGGCAGCTGTCCTGCATTGCTCGGTATGCTCG
AGTTCGACGGCGCGTCTAAGCGAAGCAAGCCGAATCTCAAGCTGTCCTGC
ATTGCTCGGTATGCTCGAGTTCGACGGCGCGTCTAAGCGAAGCAAGCCGA
ATCTCAAGAGCGGCTCGCTGGTCTTCTGCCGAGTGTCTGCGGCGGATAAG
GACATGGAGGCGGAGCTAACGTGCACATAGCGGCTCGCTGGTCTTCTGCC
GAGTGTCTGCGGCGGATAAGGACATGGAGGCGGAGCTAACGTGCACATCC
ACGCACCATGGATCTAAAAAGGACTGGATGACAGGACAGTCAACGTTTGG
AGAGCTACACGGCGGCAAGATGCAGCGATGTTCTCTGCTTCTCGCCAAAA
GTCTCACCAAGCCAAACTGCACCCACGCACCATGGATCTAAAAAGGACTG
GATGACAGGACAGTCAACGTTTGGAGAGCTACACGGCGGCAAGATGCAGC
GATGTTCTCTGCTTCTCGCCAAAAGTCTCACCAAGCCAAACTGCACGGTC
CTGAATAGCCTAGCCAAACACATGCCGTTCGAGATCGTCGCGGGTCTGAA
CGGCGCGTTCTGGGTCGATTCTGGGTCCTGAATAGCCTAGCCAAACACAT
GCCGTTCGAGATCGTCGCGGGTCTGAACGGCGCGTTCTGGGTCGATTCTG
AGTCGAACTCGCACACGATCTTAATCTGCAACGCCATCCTCAACTCGGAA
GTCATGACGGACCAACAGACGGACGCTATGGTGAACCATCTAGCGAAACA
CCTCAAGAAGGAGCTACGTGATGACGGCGACAAACACTAGAGTCGAACTC
GCACACGATCTTAATCTGCAACGCCATCCTCAACTCGGAAGTCATGACGG
ACCAACAGACGGACGCTATGGTGAACCATCTAGCGAAACACCTCAAGAAG
GAGCTACGTGATGACGGCGACAAACACTAG
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