prot_H-paniculata_contig3065.8303.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3065.8303.1
Unique Nameprot_H-paniculata_contig3065.8303.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length578
Homology
BLAST of mRNA_H-paniculata_contig3065.8303.1 vs. uniprot
Match: D7G8E4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E4_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 1.240e-90
Identity = 252/644 (39.13%), Postives = 329/644 (51.09%), Query Frame = 0
Query:    1 IEWVTVNQLDHALRVCSPMRRALDPQKLRHSREHDSV-APFAFVPTNAVAAARNS-----GKATSRQ-----------GHAGSA----RQRGKTA-LARKRVGKWTERDKDLAERELAMVIVEGQQKFVEGYVTQRRRYLSRRVEAQRDGHGGFYRE----GRGFAGAVGAALDNLAAKAVEARLAEFREAVKRTKITLKLLEAKKAAADATT-------VATATAGTMETGPLVNVLAAPAVTAATLKKTRTPGKSKRKASNESK-------RDGKPTT-----ILQRLSEEYSDRVGERGGGLPSCSSRNLPTKTNSAGVGXXXXXXPTAERKRAHAAALTVQHAFRVRMFHRFVWAQAYLRRPYHAFQLFARVSRPLLGTHSHTRIAVGTGTARNSDRAISRADSESTTSG--GSWLESPGFCVSDPRHVHSMDDAFWAY--SKWHRSLISSVASSTLLLAADRAETATTTPPAPGKAVAIEALPLPP-----------EGAHLFERKYILHKEAMRVLLLDLRLPLSPGTLDLAMEDLGVVIAKETSSLLE------REQ------GVNLGGTSXXXXXXXXXXXXXIGQKKMGAFGQSREISFVSFYGWWVRHLPYDPASASCIMKIVRCAKRLHSAEV 572
            +EW+TV+QLDH+LR C   RRALDPQ +  S E + + A  A V  +A   + N+     GK +S +           G +G+A    R RG+ A +ARKRVGKW + D+DLAE E+A +I++ QQ+FVEGYV +RRRYLSRRV AQRDGHGGF RE    G G            + KA+EA+ AEF EAV RTK+ LKLLEAK AA+            A  TAG +   P  +   +P V      + R P  S  KA+N+ +        D K  T     +L+  +E YSDRVG++GGG    ++R    + + AG G         ER R  AAA TVQ AFR RMFHRFVWAQAYLR P HA+++F R      G                  R  + AD  S       +W E PGFC S P HVH+ D  F  Y  S   +S   S +S+T     +  ET  T P A     A  + P  P           E A  FERKY +   A+R + +DLR+P  PG LD A+EDL   IA++++  +E      R Q      GV L                 +GQ   G       +SF  +Y WW+RHLP+DPAS  C++K VRCAK LH++E+
Sbjct:    1 MEWITVDQLDHSLRTCHLTRRALDPQGMERSSEREPLPASAALVAPSAAGTSSNAVNMLLGKRSSNRQAIGVPRRSNRGRSGAASVRSRGRGRRAKMARKRVGKWNDEDRDLAELEMAGLIIQEQQEFVEGYVQERRRYLSRRVSAQRDGHGGFQREEVPTGPG---------GRWSKKAMEAKKAEFSEAVNRTKVVLKLLEAKTAASSLPQPSGGDGDAAGGTAGAVGRNPSGD---SPGVRGDGSHRRRDPQHSPPKANNDRRIKSKACVSDDKRETWDMKKVLRTATEAYSDRVGKQGGG----ATRINANRQSGAGCGATAVGRG-GERARMSAAAQTVQVAFRQRMFHRFVWAQAYLRGPTHAYEVFKRCLPMPRGGXXXXXXXXXXXXXXXXLRPAALADVASAAVNLVDAWPELPGFCPSFPHHVHAADPIFLRYLRSCTPKSYDISFSSATTTTQEEGTETGKTPPTASASTGAGVSSPGRPXXXXXXXXXNQEFAEAFERKYHIRTAAVRGMYVDLRVPFLPGALDAALEDLEQTIARDSAPPVEGGAKNRRRQVDTVSSGVRLASPLRGSGGGTAGGKGRVGQNPHGG-----RLSFAKWYPWWIRHLPFDPASTGCLLKTVRCAKALHASEI 622          
BLAST of mRNA_H-paniculata_contig3065.8303.1 vs. uniprot
Match: A0A6H5L1Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z0_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 4.580e-44
Identity = 149/462 (32.25%), Postives = 208/462 (45.02%), Query Frame = 0
Query:  164 EAVKRTKITLKLLEAKKAAADATT-------VATATAGTMETGPLVNVLAAPAVTAATLKKTRTPGKSKRKASNESKRDGKPTT------------ILQRLSEEYSDRVGERGGGLPSCSSRNLPTKTNSAGVGXXXXXXPTA-ERKRAHAAALTVQHAFRVRMFHRFVWAQAYLRRPYHAFQLFARVSRPLLGTHSHTRIAVGTGTARN--------------SDRAISRADSESTTSGGSWLESPGFCVSDPRHVHSMDDAFWAYSKWHRSLISSVASSTLLLAADRAETATTTPP----APGKAVAIEALPLP--------PEGAHLFERKYILHKEAMRVLLLDLRLPLSPGTLDLAMEDLGVVIAKETSSLLE---REQGVNL----GGTSXXXXXXXXXXXXXIGQKKMGAFGQSREISFVSFYGWWVRHLPYDPASASCIMKIVRCAKRLHSAEV 572
            EAV RTK+ LKLLEAK A+++           A  TAG +   P  N   +P       ++ R P  S  +A N+ +   K +             +L+  +E YSDRVG++GGG    ++   P      G G       T  ER R  AAA TVQ AFR RMFHRFVWAQAYLR P HA+++F R      G                                 A++   S +     +W E PGFC S P HVHS D  F  Y +      S ++ S+    A+        PP    + G  V+    P          PE    FERKY +   A+  + +DLR+P  PG LD A+EDL  +IA++ +  LE   + +  N+     G               +G+ ++        +SF  +Y WW+RHLP+DPAS  C++K VRCAK LH++E+
Sbjct:   11 EAVNRTKVVLKLLEAKAASSNLPLPSGGNGDAAGGTAGAVGRNPSGN---SPGARGHRSRRRRDPHHSPPEAINDRRTKNKASVSDDKRETWDMKKVLRTATEAYSDRVGQQGGGATRINANRKP------GAGCGATAVGTGGERARMSAAAQTVQVAFRQRMFHRFVWAQAYLRGPTHAYEVFKRCLPMPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQSTALADVASAAVNLVDAWPELPGFCPSFPHHVHSADPIFLRYLRSCTRESSGISFSSATTTAEEGAATGRAPPTASASTGAGVSSPGRPPQQTQQQQHNPEFGEAFERKYNIRTAAVHGMYVDLRVPFLPGALDAALEDLEQIIARDGAPPLEGGGKNRRCNVDTVSNGVRLASPLGGSGGGIAVGKGRVTQNPHGGRLSFAKWYPWWIRHLPFDPASTGCLLKTVRCAKALHASEI 463          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3065.8303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8E4_ECTSI1.240e-9039.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1Z0_9PHAE4.580e-4432.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3065contigH-paniculata_contig3065:8473..12359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3065.8303.1mRNA_H-paniculata_contig3065.8303.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3065 8473..12359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3065.8303.1 ID=prot_H-paniculata_contig3065.8303.1|Name=mRNA_H-paniculata_contig3065.8303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=578bp
IEWVTVNQLDHALRVCSPMRRALDPQKLRHSREHDSVAPFAFVPTNAVAA
ARNSGKATSRQGHAGSARQRGKTALARKRVGKWTERDKDLAERELAMVIV
EGQQKFVEGYVTQRRRYLSRRVEAQRDGHGGFYREGRGFAGAVGAALDNL
AAKAVEARLAEFREAVKRTKITLKLLEAKKAAADATTVATATAGTMETGP
LVNVLAAPAVTAATLKKTRTPGKSKRKASNESKRDGKPTTILQRLSEEYS
DRVGERGGGLPSCSSRNLPTKTNSAGVGGGGGNGPTAERKRAHAAALTVQ
HAFRVRMFHRFVWAQAYLRRPYHAFQLFARVSRPLLGTHSHTRIAVGTGT
ARNSDRAISRADSESTTSGGSWLESPGFCVSDPRHVHSMDDAFWAYSKWH
RSLISSVASSTLLLAADRAETATTTPPAPGKAVAIEALPLPPEGAHLFER
KYILHKEAMRVLLLDLRLPLSPGTLDLAMEDLGVVIAKETSSLLEREQGV
NLGGTSGVRGGGTRAQKAGIGQKKMGAFGQSREISFVSFYGWWVRHLPYD
PASASCIMKIVRCAKRLHSAEVNSGRY*
back to top