prot_H-paniculata_contig3055.8276.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3055.8276.1
Unique Nameprot_H-paniculata_contig3055.8276.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
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BLAST of mRNA_H-paniculata_contig3055.8276.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.440e-18
Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 0 
Query:    5 GSIKVQHKSHILKLMFICTISRPDPEHDFDGKIRIWRVCTIREAQRTTVRRARG-----------------------DTYEVDVTIDAEWYREWYVNDLLP 82
            G  +V H+SH+ K+M I   +RPDP HDFDGKI IWR+C I  AQR++ +                           + YE D TIDAEWY++WY++ LLP
Sbjct:  181 GPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLP 281
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3055.8276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE1.440e-1841.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169:SF1coord: 9..82
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 9..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3055contigH-paniculata_contig3055:15863..16111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3055.8276.1mRNA_H-paniculata_contig3055.8276.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3055 15863..16112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3055.8276.1 ID=prot_H-paniculata_contig3055.8276.1|Name=mRNA_H-paniculata_contig3055.8276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
GNKVGSIKVQHKSHILKLMFICTISRPDPEHDFDGKIRIWRVCTIREAQR
TTVRRARGDTYEVDVTIDAEWYREWYVNDLLPE
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