prot_H-paniculata_contig304.8238.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig304.8238.1
Unique Nameprot_H-paniculata_contig304.8238.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
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BLAST of mRNA_H-paniculata_contig304.8238.1 vs. uniprot
Match: D8LMH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH8_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 3.120e-10
Identity = 75/277 (27.08%), Postives = 113/277 (40.79%), Query Frame = 0 
Query:  156 PGCAPAIFLRVHPSPSDSPEKDSNASXXXXXXXXXXX-----AAEVLEAGAGGGATVGYLEAAKNNPENDPGTSLDNDLESDRGVDGDTVEQVREKHPHGLHHHVSALSSSNILKTEQQQGVDDKXXXXXXXEAEIAMCLWVDQPGSGAGDDLVTK-----GRARAVLQEVRSRVSHLRCLQGDILKPAPAGGVILRARYNPDANGLPIMVVSTKIRLLKGGAPRVYRVILQPGLGCCVGFCSTHDIGTGEAGKVWEDAGFSQVTQRGEYEGSRAGE 422
            PG  P IFL + PSP  +P+  + AS                 A+  E   G   T   +++ + N E   G  L           G     V E    G+      +S+   ++    + +++ XXXXXXX AE+ M LW DQPG+    D+ TK       A   LQEV   V        +  KP P G +I+R +++ + NGLP                                        T ++ KVWE+AG++QVT+ G+Y+G+R+ E
Sbjct:    6 PGSPPPIFLVITPSPRSAPKITTTASSMRQSADRDAPDGEKTIAQEREPEPGDSKTENEMDSHRRNEET--GELLGEGPPXXXAAAGAVASAVSEMSRGGVVESPPEMSAGCGVQRSSGERLEEXXXXXXXXXAEVLMNLWADQPGA----DITTKKADWNASAMVALQEVLPGVPEGLHTSAESFKPVPGGRLIMRVKHDLEPNGLPF---------------------------------------TAKSAKVWEEAGYNQVTETGKYDGARSIE 237
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig304.8238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMH8_ECTSI3.120e-1027.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig304contigH-paniculata_contig304:23047..40693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig304.8238.1mRNA_H-paniculata_contig304.8238.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig304 13437..40693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig304.8238.1 ID=prot_H-paniculata_contig304.8238.1|Name=mRNA_H-paniculata_contig304.8238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
MRRGKEGQAMNSTTSASAPGSTPTLPTPTLRWVTRAAIEQSGGVVVAALT
KLDKPYAANVQCHWSASSPIEVLGSTVIATKVIPETSGSAASGKGAKGKG
GKGKAERKESSLAKNASDQSVILEEDRPPSLGTSSWAESKSARMGGRPKG
TKVCSPGCAPAIFLRVHPSPSDSPEKDSNASATTSEADGGGGAAEVLEAG
AGGGATVGYLEAAKNNPENDPGTSLDNDLESDRGVDGDTVEQVREKHPHG
LHHHVSALSSSNILKTEQQQGVDDKENEEQEEEAEIAMCLWVDQPGSGAG
DDLVTKGRARAVLQEVRSRVSHLRCLQGDILKPAPAGGVILRARYNPDAN
GLPIMVVSTKIRLLKGGAPRVYRVILQPGLGCCVGFCSTHDIGTGEAGKV
WEDAGFSQVTQRGEYEGSRAGEWRILFRCAFSAPDVTSETLEEDNNSNKN
TDKCGTVDSNADVDEALEHVTSMDNNNNNNNNNNDNNNNTAATEASTFVT
AILHLPPLFQTQPSSVYLVLVDHDTEEETRQPSLHTKAMAVRPNRNGYTL
LAAVYSRRKDLPKGHWYLQLLSDRPLLPPKTSPLSFPRSPKGCRGGSEEV
MSVLGKVACGTRSVYGGVYVPNKYFVLFRRV
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