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Homology
BLAST of mRNA_H-paniculata_contig1128.819.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 2.980e-125 Identity = 242/443 (54.63%), Postives = 285/443 (64.33%), Query Frame = 2
Query: 149 MLRVGERVLLLALTEDRDKRPLGYLSSRLLAGVSGRSSFVTLDCALTPFRDATPGERSVEPVVLSDCVFRVEACVDRHDAARATVSQGHLDSGSGGHLGRQRGAPVRYSKAIQLIHEFTGSLVCIDVQDRAAHEGFAMKVVLKNVEPPSVVG-SVEEWADTWWELRSPENMRVSQVLHYDEICLHSNRWHRSITARPTPYSRDDAAEHEKRRTAGASGDVDLGLA------LTRKDCAGEVDASFSHSLLRVVPFDDHPVLATHE---SPSPSSGATVTADSGRWGVAGGGPGCNVSGG----GGXXXXXXXVANATLAEGVLRGGDLVRLCHLSSTGFLTHETMTTL---QGEKRKREDIDQGSRGGETGNFRIMGDRSGGVKSRGPSGDNLVKGDPFLYVSGTPERRQKLQNASSNCLWVLERTHCALGGRPLRRYAISSS 1426
MLRVGERVLLLAL+E+RDK PLGYLSSRLL GRSSF TLDC+LT FRDA P ERS EPVV+SDCVFRV ACVDRHDA RA+ SQ +L+ G+ H G Q G PVRYSKA+QL+HEF+G+L+CIDVQ+RA EGFAMKVVLK ++PPS G S + + +TWWE++SP N+R+SQVLHYDEICLHSNRW RS+ A PT R + G SG + G A L R+ G V ASFSHSLLRVVP+DD P L + S + +S ATV A +GG PG + S G V G +RGGD+VRLCHL STGFLT E +T +G + E G G +G + D V G PFLY+S TP RR KLQNASSNCLWVLERTHCALGGRPLR S++
Sbjct: 1 MLRVGERVLLLALSEERDKHPLGYLSSRLLMDAEGRSSFATLDCSLTSFRDAPPAERSWEPVVVSDCVFRVAACVDRHDATRASQSQRNLEPGNTVHRGMQPGTPVRYSKAVQLVHEFSGALLCIDVQERAESEGFAMKVVLKAIDPPSGDGGSTDGYKNTWWEVKSPGNVRISQVLHYDEICLHSNRWDRSVRAHPTLLDRQRVTSATE--VEGESGTEEAGAATGLSPTLPREKYPGAVHASFSHSLLRVVPYDDCPSLPYSDEGLSIATTSAATVMAS-----ASGGWPGPDSSSSPHALAGSGTADTPVGGVADDAGAIRGGDVVRLCHLRSTGFLTCEVVTPEAFPRGGWAQPEPRMVGQAGXXXXXXXXXXXXXVDGPVQGQASDGGVGGGPFLYISATPHRRLKLQNASSNCLWVLERTHCALGGRPLRGSCASAA 436
BLAST of mRNA_H-paniculata_contig1128.819.1 vs. uniprot
Match: A0A6H5KRP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP3_9PHAE) HSP 1 Score: 265 bits (678), Expect = 3.940e-77 Identity = 169/360 (46.94%), Postives = 204/360 (56.67%), Query Frame = 2
Query: 449 QRGAPVRYSKAIQLIHEFTGSLVCIDVQDRAAHEGFAMKVVLKNVEPPSVVG-SVEEWADTWWELRSPENMRVSQ---------------VLHYDEICLHSNRWHRSITARPTPYSRDDAAEHEKRRTAGASGDVDLGLA------LTRKDCAGEVDASFSHSLLRVVPFDDHPVLATHESPSPSSGATVTADSGRWGVAGGGPGCNVSGG----GGXXXXXXXVANATLAEGVLRGGDLVRLCHLSSTGFLTHETMTT--------LQGEKRKREDIDQGSRGGETGNFRIMGDRSGGVKSRGPSGDNLVKGDPFLYVSGTPERRQKLQNASSNCLWVLERTHCALGGRPLRRYAISSS 1426
+RG PVRYSKA+QL+HEF+G+L+CIDVQ RA EGFAMKVVLK ++PPS G S + + DTWWE++SP N+R+SQ VLHYDEICLHSNRW RS+ A PT R + G SG + G + L R+ G V ASFSHSLLRVVP+DD P L + S AT A + +GG P + S G V G +RGGD+VRLCHL+STGFLT E +T Q E R +DQ G ++G + D V G PFLY+S TP RRQKLQNASSNCLWVLERTHCALGGRPLR S++
Sbjct: 9 RRGTPVRYSKAVQLVHEFSGALLCIDVQKRAEREGFAMKVVLKAIDPPSGDGGSTDGYKDTWWEVKSPGNVRISQARLASCFASSSGEGKVLHYDEICLHSNRWDRSLRAHPTLLDRQRVTTATE--VEGVSGAEEPGASTGPSPTLPREKYPGAVHASFSHSLLRVVPYDDCPSLPYDDGRL--SIATTAAAAXMASASGGWPAPDSSSSPYALAGSGTADTPVGGVVDDAGAIRGGDVVRLCHLASTGFLTCEAVTPEAFPRGGWAQPETRM---VDQAGXXXXXXXXXXXAGVDG--PAQGQASDGGVGGGPFLYISATPHRRQKLQNASSNCLWVLERTHCALGGRPLRGSCASAA 359
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 414.8 |
| Seed ortholog evalue | 5.5e-113 |
| Seed eggNOG ortholog | 2880.D7FMW8 |
| Preferred name | RYR1 |
| KEGG ko | ko:K04958,ko:K04960,ko:K04961,ko:K04962,ko:K04963 |
| KEGG TC | 1.A.3.1,1.A.3.1.2,1.A.3.2 |
| KEGG Pathway | ko04020,ko04022,ko04024,ko04070,ko04114,ko04140,ko04210,ko04218,ko04260,ko04261,ko04270,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04742,ko04745,ko04750,ko04911,ko04912,ko04915,ko04918,ko04921,ko04922,ko04924,ko04925,ko04927,ko04934,ko04970,ko04971,ko04972,ko05010,ko05016,ko05167,ko05205,ko05410,ko05412,ko05414,map04020,map04022,map04024,map04070,map04114,map04140,map04210,map04218,map04260,map04261,map04270,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04742,map04745,map04750,map04911,map04912,map04915,map04918,map04921,map04922,map04924,map04925,map04927,map04934,map04970,map04971,map04972,map05010,map05016,map05167,map05205,map05410,map05412,map05414 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity |
| EggNOG OGs | KOG3533@1,KOG3533@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01009,ko04040,ko04147 |
| Exons | 8 |
| Model size | 1642 |
| Cds size | 1494 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1128.819.1 >prot_H-paniculata_contig1128.819.1 ID=prot_H-paniculata_contig1128.819.1|Name=mRNA_H-paniculata_contig1128.819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=498bp
MLRVGERVLLLALTEDRDKRPLGYLSSRLLAGVSGRSSFVTLDCALTPFR
DATPGERSVEPVVLSDCVFRVEACVDRHDAARATVSQGHLDSGSGGHLGR
QRGAPVRYSKAIQLIHEFTGSLVCIDVQDRAAHEGFAMKVVLKNVEPPSV
VGSVEEWADTWWELRSPENMRVSQVLHYDEICLHSNRWHRSITARPTPYS
RDDAAEHEKRRTAGASGDVDLGLALTRKDCAGEVDASFSHSLLRVVPFDD
HPVLATHESPSPSSGATVTADSGRWGVAGGGPGCNVSGGGGSGGGGSGVA
NATLAEGVLRGGDLVRLCHLSSTGFLTHETMTTLQGEKRKREDIDQGSRG
GETGNFRIMGDRSGGVKSRGPSGDNLVKGDPFLYVSGTPERRQKLQNASS
NCLWVLERTHCALGGRPLRRYAISSSMRGNPVAHSIHRLQSVDGSGRTVG
TSDDTIADFEGRPFHEFSEGQEGARSSRRDSGSFSRRTSTVEAGEFF* back to topmRNA from alignment at H-paniculata_contig1128:8677..20066+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1128.819.1 ID=mRNA_H-paniculata_contig1128.819.1|Name=mRNA_H-paniculata_contig1128.819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11390bp|location=Sequence derived from alignment at H-paniculata_contig1128:8677..20066+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TATATTTTCAAATAACACCCCCTCTTTTCAATCTGCAGCTATTGCTTCCT
TTGTGCATGACACGAAACAGGAAGAGGGCGGCATGGGACCAAGCTTGAAA
TCATACTCGTAGTTGTCAAATTGGTGAGCACTGCTGGAAGTATTCGCTAT
AAATTGTGAAAGCTAGGAAAAGAAGAGTCTGTCCGATGATTCTTGTGTAA
CGACTTAGCAGTGAGAGAACAGGGACGGGTGAATTGCTTGCTTGTAGTTG
TCAGAGGCAACCCCAGGCTGTCAGAGGTAATCCCAGGCTGTCAGAGGTCA
TCCTAGGTTGTGTACCCTGGTGGGAGTAATGGGATACAGCATCCTTCATT
TAGTTGAAAGAAAATTCGCTTTTTGACCGTTCTACGGTAGTTCATTCGTG
GTTGTTGTGTGTTATTGAGATTTCCTTCACGGTTGAGTGTGCAACGCGCT
CGTAATCATGTACTTTCTTGAAGGTTTTCTGGCCTGAGAGGAGTGAATAT
GCTGAGGGTTGGAGAGCGGGTCCTTCTGTTGGCTCTGACTGAAGATCGAG
ACAAGCGCCCGCTGGGATACCTCTCTTCGAGGTTGCTGGCAGGTGTTTCT
GGTGAGTCGTGAATTATTCCTCTACGCGTCGGATAATTAAAAAGGACCAT
TTTGAACATGCGGCACACGGCAACACGGCAACAGGTATTTCGATCTTTTA
AAGATCACTTGAACCAGCCCGAACAGGCTGGCGCCCATTTTTTGCTTTTC
TGTCTGTGACATCAAAATATTTTCAGAAGTACTTGCCCATTTGCCTATCC
TGTTGTATTCACGTATCAACTCCTTTGGTCCTACTTGACCACTTTATGAT
GGACGATAGGTATATATTGTTCTTCTACCTGCTGCAAAATCAATAGGCGT
GGCAAAACCACGACTGAGAGGTGAAAATCCCTGCGTGTGTCGCAATTGTG
CTTACCGGGTTAACTCGATTACGCTGTACAGTACGTGTTTTGCCAACCTC
ACAAGGGATTGGTCGAACAGGCACATGCAGTTCAGACAGTCGGTGCACAA
CCCATTCAAGGACAGCGATCTAGACCACAACACAACGTCCGCCTCTCAAG
GAAAACGATGTACCCTCCTCCGAGCAGCGCTGGCAGGCGTTCATTGAGGC
GCCTGTTTGATAAAAAAATTTGAAGAAGATGGCGGGACAGGTAGGAGTAT
TGCTGGCTTTAATGGGGTTCATTCATGTCTGAGCTCCAACCATTGTGCCA
CTGACCGCAAGTTTCTTCTTCTCTACCACTGTAATTTGCCTCAATTTCGA
TTAACAAAGTCCTCAGCGACATTCCTAGATCGACAGCGAAATTGAATCTC
ATGGGGTGCTCGAAGAGGCACAGAACAAACGTTTGTTGTGCTATTCTCCG
TACCCGAATTTAAGGATCCAGATGGGAAAACTACCCCATAGTATCGGAGA
AACCATACTTCGATCCCCCCACACCCTAAATTTCGGTGTACCCCCGTCCT
CGTCCGCCCCCGCCCCCCTTCCCACGATTCGGTTCCATAAGGTGCGCTAT
TTTCGGCGTCCTCTTCGCTCTAGTTGTAGTTTGTACCGCCCGCCGCAGTC
CTCGGTTCCCTCTTTTGTACCATTTTTTCTTTGTCGACCTGCCCATCCTC
AGGCCTGTATACCTTACCGGCCAGTTCCCCTACCAAGCACAGGCCCCATT
TAAGCTATCACCCCCACTAGGTTTAGATCGAGGAGCCCTTCTTTCTCCTC
CCCCCCTCCAGGTGGGGCGACTTTGATGATTGTGTCTTCCCATTTTGTTT
TCATGAGGTGTTATCCTCCTTTAATGATTTCATTTTTCTGATAAGTGTAT
ATAACTACACGTTGAAATCAGCTGCTTAATCCCCAGGCTTGGATGCGCAG
TGATTTTTCTCCTCTCCGTCGTTTTTTACGGCCTGCAGAGTGTACATTTG
ATGTTTAATACCTGTGTATGCCCACATGGGCTTTCTCTTCAGGGCGTGCG
GTACGCTTGAACTGTCGCCCCCGCCGCTTTTAAACTAGGGGTACCCTTAC
TTTCCTCCCCCCTCGAGGCCAGGTAAACGCACGAAACACCAGCGAAACAA
ACCAGACACGACAAAGCAAAACCAAATCAAATCAATGCAAAACAAAAACA
GCAAACACACATATCCGAAGCAGGCCCAGGCAAGCAACCGGGAACCGAAG
GGAGAAAGGGTGGGCGGTGCTGGGCGGGATACGGCATCCTCTCTTTCATT
CGTTTGGTTAGCCATGTTGGCCGCGAAGAAAATATGTACAGTAAGTAATG
ACAATGATTTTACCGTACACTAACACGCCAACTCGGATTCGATTAGATCC
GCAGTCAATTCTTTGGCGAATCCAGTCATCTCAGACCCGCGGTCATGGGC
GCTTTTCACAGTATTGTCAACCGTACGGTAAACGGGAATGGTTTTGACAC
CGCGGTAATTACGTTTTGCTGTGCCACGCGGGGTAACGGTAAACGGGATG
TAGAGGTTCTCACGGTATCAGTACCGAATAACACGCAATACCGTGGTATT
ACTACCGAGAACACCCATGGTTTCTCCTATTGCTAACGACTTGTTTCGTT
TCGGTCTCCATGGACTGAAATGCTGTAATGCATGTGGGGGAGACAGACGT
GGGTTCACCCTCCTGTCCACGGACCCTTTTTTATATTAGAAACATATTTC
GTCATTCTCCACTTCAAATCACCCATCTTGGGTGCTGGAGGCTATTTCGG
AACGAAAAATACCCCGAAAATAACGGTCAAAGGCAGCAGTCTTTGTTGAC
AGGATCATGTCATTTCCCCCTCTGTGCTGTGTGCTCAGTGTAATGTCTGT
ATACTGCACTGGCTATCTGGATAACCGAGGGCTGCCTATCCCCGTAATCA
TACCATATGTGTCCTTTCCCTTGTTCATAGGTGCGGATTCTGAGGGCACC
GGCGCTCAAAGGGTTAAGTAACCCCAGCTAACCACCCCGGAGTATATATT
GACTAGGGCACAAGGGGGAGGGGGGGGTATACTCATGTTTTACAAACTAA
AAGTCGAACAGAGCCGATGGCCACACGGCTTGAATCAGATACAACCGACC
GCGAATTTGCTGTCTAGATCAAAAGTCGAACTCAACCGGCCACCGCTTGG
CTAGATTCAGACAGAAGTGAGCGTGAAACAAATGCAAAGTCTGACCGAAC
CCTACCGCGAACCGGCTCTGGTTGTGGTCGCGCGTTGAAGTGATGTGTAC
TTCCTGGTTATGTGATATTTTCCCTGGTTCATAGGTGTGGTTGTGTAAAT
TTTTCAATTTCCCGCCCGATTCGCGGATATCGTGCAGTGATGAGAAAAAC
GAGCACAGCAGCATACATGAAATGTGCAGAGAGACATGACAACCGAGTTT
GTGGCTACTGTCTTCCCAAAGCAGGATGCAGAGTGCGGTGAAAATGAAAT
AACATACAGAAAATGGATGGGAAGCATACAGTCCGGTCGGCGCTCCCTAC
GCCACTGTCGCTAGCCTGACTGTCGCCAACCTCGCGACGGGTACGCTGCG
CGTTGGAAAGAAAACATTAACTTGTCACTCAGCGTGCGTTGGGAAACATG
CCTACAGTCTGTGCCACTTCGGGCACGGTTGCTCGCACGGCTGCCGCTGA
CCTCAGCGCGTGCATTGTGCGTTGAAGAGCGACAGCAAGTGCGACCTCGG
GCAGAGTCCCTCGCTTGGCAAAGCCGACCGTGACGGGTGCAGTGTGCATC
GATAACTTTCTAGTCAACGTTACGTCAGGCACTGACCTCGCGATTGTTGC
ATTTTGCGTTGGAAACTTATAGTCAGTGCCACCTTGGGCACGGTCGCTCA
CTCGGCAAAATCGACTTGGCGACGGGGGTACCAATACGTTGGCACTTTGT
CGTATCGTTCGAAAAGTAACGGTTGAAAGAGGGGTGTTATGTGTCCCAGA
GCCCATTTCGCAGCTCATTTTACCCTGCGAAATACGTTAGTTGCCACCAG
GCAGATCTCCCAGGCACTGCAAGTTCATGACACAAGACGGCCCGGGCCCG
CATTGTGGGTCGGCGGCTTACAACCCGGCAAGGCTCACTTGGGACGAGGG
CGCGATGTAATTTTGTTTGTCGTATTTTTTTAACGAAGATACACAGCTGC
CTCGCATATAGCCTGTACTGTGCTAACAGTTCGTTGTCTGTAACTATCCT
ATTTCTTTCGTCACATCTGTCACACTGAATTCAGGTCATGATCTATTCAG
AGTGACAGACACTGTTAACATTTGAGTGCAAACAATTGACCAGGGACTCG
AGATGGCATGGAACATTCACAGACGTCGAATTCAATCATGTCGGACAGGT
TAATGGTATTTTGTATTTTGTAGGCCGAACCCTTTGGCGGCGTGTGAGCG
CTTGAGACTGCGGTGTTGCCAACCTTCACTAACAGGTGGAAGTCCAGATA
TCATCGTTCTTTGTCTGTGGTATACCTCTTCGCGCAGACGCTGCCTCTAT
GTACAACAATGACCAGTGGCTAGAACTGGTCCGCTGTACCAGTTGGCTGG
AAGGGCAACATTCAAACCAGTTCCAGATATCAGTTTCGTCAGTTAAACTG
GGGAATTTGCCGGCGCCAGGCGTTGTCTGGTAAGGCAACGTGGCGGAGGT
GCGGGTATGCCCCACCCCCCGGCTCGTGAGGGGGGCCACGCTAGAGGTGA
CGCCAGGAGCAGAAAACAATATGTCATTTGCGTAATAATCCGTTTGAAAT
TGTTTTGAATTCCGGCCTTAACATAAAGACTTATTTGAGTGCTTCGTCGA
CCGAAACCAGGAAAAATACATTTGTCACCAAACTGTAGACTACACATTTT
GACAAATTTACGTTTTTGTCACCACGAAGATTGGACATTGGCATTACACA
AAAGGACAACGGCACATCTACTTGATGGAAAGCGAGGACGGAGAGCAGCA
CATTTTCTTTTTTCAAGTTTTTTCCACAATTTATGCCGGCTCCTGCCCGG
CGTTACCAAAAATCACTGCTGTATCAGTCGCACAATGCACTGCGCAACCG
AGTTTCTTCCGCCATGGGTGACGTCGGATCAACCTTACCGCCTGCAGAAT
CCGTGCAAGAAGCAGCGCCATTACCACCACCGTCAGAGCCTTCATCATCT
AGCCCTCACTACTGTAGGACTTATTGCGGCTGTCGGAATCTGAGTCGCTG
CTGATAGATATAACTACCAGCGGCCTCACCCGCAGCGATTTATATGTGTA
TAGTCTGCTGGGGGTGCCGTGTGTGGGCTGCTGCGGCTCCCAGTAGAGGT
TTCGGAGTATGACATAGACAAGGGAGAGTGCTTTGGAGTATGATACGGGT
GAGAAAACTGGTAAAGGAGAAATTTCCAGGCAAGTCTACCACTTAATCCA
TTTAACAACCACTTACCAGTTTAACTAACAGTCAGTCATAAGTCTACCAG
TAGCTATTTATGCGCCCTGAAATGGCCGACGTGACTGCCGGTGGCTTCAC
CCGCAGCGATTTGTTTGTGTATGGTCTGCTGGGGGTGCCCTTTGTGGGCT
GTTGGAGTGTGACGTAGACAAGGGAGAGTGCTTTGGAGTATGATGCATAT
AACGGGGGAGAAAACTTGTAAACGGGAAATTTCCAGGCCAGTCTACCAGT
TAATCCAGTGAACAACCACTTACCAGTTTAACTGGCAGCCAGTTCATAAC
TTTACCAATAGCTATTTGTGCGCTCTGAAATGGCCTGGCTCTGGGAGTCG
GCCACAACGCAGCCCCACTGATGAAAACTAAGCCGCAAAACAACTGTGTA
GAAGCAAGCCATAACAGGGCAAAGTCGCGGTCCAGTTTGGCGTTATTCGG
CTGGAAGCACCAATCAATCTGCACAACTGTGGATAATGCGTATACGTATC
GCGTAGCTGCTGGATCGCTAGGGTATTGGAGCTACACTAGCACGACGGCA
GATTGATTCCAGTTTATACTGCTTCTGTACCAATATTTCTGTATCGCACT
GGAATTGATATTTTCGTCTGCTCTGCTGTATCGGACAAGCTATTTGCGTT
GCATGGTAAGGCGTGCTGTCGGTTTAATAGGTCTGTCCAGGTTGGTGCTT
GATGATGCTTGTTTGAGTCAGCCACGTTCCCGCCACATCACTCGTCAACG
CTGTGCAACCACCAAACGAACGCCTTCATCAGGCCGATCGTCGTTCGTGA
CGCTGGATTGCGCCTTGACGCCGTTTCGAGATGCTACTCCCGGAGAGAGG
TCGGTGGAGCCCGTGGTTCTGTCTGATTGCGTCTTCCGCGTGGAGGCGTG
TGTGGATCGGCACGATGCAGCACGAGCCACCGTATCGCAGGGGCACCTGG
ATTCCGGAAGCGGAGGTCATCTTGGCCGGCAGCGGGTGAGGCCTTTCCTC
CCCCCCTTGCCCCTCTCTTTAATATGGCCAATTTGTAGGGCTGGATACTG
GCACACTATTTTTAACCAGTATTACCGGTAATGGTAGTATACTAATACTG
GCTGAAACGGTTGCCAGTACTTCAATCTTGCAAGTACATCAGAGTAAGGT
TCTGATGATTCAGGAGAAACCCTTAATCGGTCATTACCCATTGAGCCTGG
CGCGCAGGAGGGCAATGTTTGCGGCACTCCAGGGGATGCAGAGAGCGTAG
GTAGGGATATGGAGAGTACATGAATAATGAATAATGTTTCGGGTATACTG
GTACTCATATTCGCCGTCACGCCGTCGTCGTTCGGTACTCGATTTTGAAA
ATAAATGAAGTTAATACCAATATTGTTTTGCCTCCCGCTAGGCTGTTTGG
CCCGCGCTGAAGCGTTCGCCCGTTCGCTTCGCTCTCAGCCAGAATAGAGT
ATACTGACCAGAGCTACCAGCATTTAGCCTTGTAATTTGTGGATAAGTCA
TTCAGTGCTATGCAAATAACTGAGCCTAGGTCCGATATTGGTCATGGTTA
TGATACTGTTTTCCCCGTAAATTTCGTTAGATCTGTATACCTAGAGCTGT
ATACCTTTGGCTAGTCCCAAATCTTCAAATCGTGCTTTCATATTGTAGAT
GCTATCCGCCTGGCGAAGTTTTCCTTGGTGAGTGATGCACGTTGATATGG
CGTGTTTTGCCGCTCCCCCCTTCGGCCGCATTTTCGTGTTCGGCATCTCG
GAAAGCGCGGATTAGAGAGAAGCCTGTACTTTGTATCTACAAAGAGTCTT
CTGGGGCTTCGCGATTTCTTTAGTGTTCAGAAAAGCCGGTCTTCTGGTGA
TTGTTGTGGCTGCATAGGGCAACATATTCATGCCCTCGCATTGGCGTATA
CACAAAGTTTGACACTGCTGCTCCTCTTTCCCCACCCTCATCCTCATCGC
TCCGTCCCCAGGGTGCCCCTGTTCGATACTCTAAAGCTATACAGCTGATT
CACGAGTTTACGGGCTCGCTTGTGTGCATCGATGTTCAGGATAGAGCAGC
ACATGAAGGGTTTGCGATGAAGGTTGTACTTAAAAATGTCGAGCCTCCGT
CAGGTGAGACCTACTGTGCTCCAAAGAAGAGTTGGGTGTAGGAACCGGTG
CGCATGTGTTTCCTCTACTCTTTTGGTGTCGCGGGGTGCGGGGTGTGCAC
TTTGGCTAAACTATCAGGTGCTGCTTCAATTGATTTTGAGGGACGTTTTT
CCAACCTCTCAAGAATCCGCGGGTTGTCTTTTGATGTGATGTATATGTGA
TTTGATCTCACGCATGATTTCATATCCCGTGTCTTTCTATGTGCAGCGGA
ATTGCCAAATCAACGTATTGTCTTCCAGTGCTGGAATCCAACACACCACT
ATCCTCCACTGAAGCGATACATTTTTGTCATCATCTTCTCGATGCGGCCC
GTGGACAACAGCTTGGTCCAATTCTGTATGCTGACAAGGGTTTCGTATAG
CAGGCGCTAAGCCAGCGTGTTGATTCCCTCCCGCCCTTCCACACTTCACT
CGAATTTTTGTAGACTTCATGACTATCACAACCCCCAAACATGTGTTAGC
ACTGGTGATAGTCCGTGATTTATCATGGTAGCCGTCTTCCAACCCAATAT
CTAGAAATATCTCTAATTCGGCGAGAGCGTCGTTGTCAGACCTCGTCGCG
CGTACCAACGAGGATACCTTCGGCAAAGTCAGTGCGAAATTCGGCCTGGA
GGATGCACCCCTGCTGGCAGCGGCGAAAGCAGCGGCCATAGCGGCAAGCC
GGGATTCGCTCCCTGCGGGCGGAGATGCCGCCTGGAGGCTCGATTTGAGG
AAAAAAACGGTTTCATCCACAGAGATCACACCTCTCTCCCTCTCTCTCTC
TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCACCCCGTTTCGCACAAGTTT
TCGAATTTAGAAATTTAATTACATACAAAGCCCGTACTTCAGACCCCTGT
CTCACCCATCCCTTGCATGACAGTCCAGCATCAATCTTCGATAACGCGCA
CGGGTATGGAGAAGAGGGTTCTGACTGCAAGCCGTTTTTGTGCTTCGTTA
GTAGGGTGCGGGATTTTTTCCCAACAACACTTGGATCCACAACGTCGAAC
ACACAGCGCCTCATCACACTCCGTTTCCCACATACTATTTTGTTCTTGTG
GATCAGTTGCATAGTGTTAATGCACCGCTCTCTCACAGACCTTTTCGCGT
CACAATGTGGTACACCAGCCTTTGACAAAAGTGATTTTTCACTGTTACTT
GGCATGTGCAGATTTGCTGGTGTGCCGAAAAAGTTCGCAATCGCTATGAA
AAATCTTGGAATGTTCGAAACACGTTTTTCAAACGAATGTGCACATTTGT
TGTTCAGGAGGTAGTTGGTACAGAATTGAAAATCTGTTCCGAATAGAACG
TGGCCATATCATTTTCCGCTTATTATATAGTGAAGGTTACGTTTTCCGAA
ACCATCTTGTGTTCTTGTGATCCCTTGTGAACTATTTATCCGGGGCGGGC
CAGTTGTTGGATCGGTGGAAGAATGGGCGGACACATGGTGGGAGCTCAGA
TCTCCGGAGAACATGCGAGTCAGCCAGGTACTCAGTCCATTTCGCAGTTG
CCGAACGGCTTAGTTAGTAGGTGTCATTAGTACGCTTGGAAACAAGATCT
GGTGACTAAGCAAATATCGGGGCATGATCGCGGAGAATAGAGATAGTATA
CGGAGAGTGGGTTCGTCGGAGAGCACCCGAATTGGCGTCCCTTTCCTCTT
TACCGCAGTAGGGTGCACTATGCGTATGGCGCAACTCGAAAACACGGGTG
CCTATTTTTTTGAAGTAGACATGTCCCTCTTTTCTGTGGCACCCACGATC
GGGATATATACTCATATTTGTATTTGTTTTTTCGTTGAGCAATCGCAGGT
AAAGCCAAAAATGTAACCGCAATTTTTCCTCTCATTTTCCATCTCTGTGC
TTTGCGCCTGCCCACCGCGCTGCGCTGCGCTACCCCGTCGTATTTCATCA
CTCTCCCGAAATCTCATCTTCCAACGGTGTGATGTGTATCTGCACGGAAC
GATCAAGGTGTTGCATTACGATGAGATTTGCCTTCACTCCAATCGATGGC
ACCGAAGCATAACGGCGCGTCCAACGCCGTACAGCCGGGACGACGCCGCC
GAACACGAGAAAAGGCGGACGGCGGGAGCGAGCGGGGATGTCGACCTTGG
ATTGGCGCTGACCCGAAAGGATTGTGCGGGAGAGGTTAGTAGTTTACGGC
AGAGCGCTGCAGGAACGACTAGAAATTACCTCTACAAAGCATATTTTGGA
AGGTACGAAATTACCTATAAGAATAACTTCGGAGTATGTCCAGTATACCT
CTGTACATTATCCTTTTGACTATGTCCTGAAATGTGGCATCAAAAGCCTG
TGGGAACGCTTCTCTCGAGGGTGCTATGTCCAGGTTTCCCCGCTCCGTGT
ATGGGATTTGCGGGTAAGCGATTTAATTGAAAACCAAAGACGTCTTGCTA
TCATAGTACGTGGCAAAAAAAGGCTCCGGTCAAAGACTGCCTTACTATGG
GTAACCGCAGGTTAGGGTGAGCTAATGGCCACGGTCGCACGTACAGGAAT
ATCGGCAGCTCAACCACTTCTCAAACGTGTTTTAACGTTGCTTAGAAGTA
GTCGGGCCAACTTTGGCGAGTCAAAATGACGGACTACTCGCCCCGTGCGC
CAGATGAGACCTTTTCAATCAAGGGTTTACAGGTGCAGAAGCCAGATGAG
ACGAGACTAACCATTGCCGAACCCCCATGTACGCTTTTTCCTCCTCCTCC
TACCCCCCTAACCAACAGGTTGATGCCTCATTTAGTCACTCCCTATTGAG
AGTGGTTCCCTTTGACGACCATCCTGTGCTAGCGACCCACGAAAGCCCAT
CGCCCTCTTCGGGCGCTACGGTAACAGCCGATAGCGGACGATGGGGCGTC
GCTGGGGGAGGTCCAGGATGCAACGTTAGCGGTGGAGGTGGCAGCGGGGG
TGGGGGTAGCGGTGTCGCCAATGCGACGTTAGCGGAAGGCGTGCTTCGCG
GGGGTGATTTAGTCCGGTTGTGTCACTTGAGTTCCACCGGTTTTCTGACG
CATGAAACAATGACGACTCTTCAAGGGGAGAAGAGAAAAAGAGAGGACAT
TGACCAGGTAGGGAGCCTGTGTGATGAAGATTATCAAGGTGAATATTTAT
AGGGAATGGTTGTGTAGAGGTACACGCCTTTGGGGCTGAGGGCAAAACTG
TCGTTGCGCGAGCGGTTCTTAGGCCTCTTCCGACCTTTTCAGGCACCCGC
AAGATGAGGGTCGTTGTGTCTTGTTGAAGGTAAATCCAAAATAAGAGCAG
CTTAAGTCATCTTCTTGCTGATAGTCGCTAGGTTTTCCGTTGCCTCATCG
ATACACGAGCTTGTGTTCTGCGTTTCGCTGTCACGTTTTCAGTAACTTGC
TGACTACGCCTCCATGTCCGCCTTGTGAGCGCAGGGGTCACGGGGAGGTG
AAACCGGGAACTTCAGGATAATGGGCGACCGCAGTGGTGGGGTTAAAAGT
AGGGGTCCTAGCGGTGATAATTTGGTCAAGGGTGACCCTTTCCTTTACGT
GTCTGGCACTCCCGAGCGACGACAGAAACTGCAAAACGCCAGCAGCAACT
GTCTGTGGGTCCTGGAGCGCACCCATTGCGCCCTCGGTGGAAGGCCGCTC
CGTAGGTACGCAATATCTTCGTCGATGCGAGGAAACCCTGTTGCTCACAG
CATACATCGGTTGCAATCGGTCGATGGTAGTGGTCGCACCGTAGGTACAT
CCGATGACACCATCGCCGATTTCGAAGGGCGACCATTTCATGAATTCAGC
GAAGGGCAGGAGGGGGCAAGAAGCAGCCGCCGTGATAGCGGTTCCTTCAG
CAGAAGAACTTCAACGGTAGAGGCAGGTGAGTTCTTTTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1128:8677..20066+ >mRNA_H-paniculata_contig1128.819.1 ID=mRNA_H-paniculata_contig1128.819.1|Name=mRNA_H-paniculata_contig1128.819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2988bp|location=Sequence derived from alignment at H-paniculata_contig1128:8677..20066+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGAGGGTTGGAGAGCGGGTCCTTCTGTTGGCTCTGACTGAAGATCG
AGACAAGCGCCCGCTGGGATACCTCTCTTCGAGGTTGCTGGCAGGTGTTT
CTGATGCTGAGGGTTGGAGAGCGGGTCCTTCTGTTGGCTCTGACTGAAGA
TCGAGACAAGCGCCCGCTGGGATACCTCTCTTCGAGGTTGCTGGCAGGTG
TTTCTGGCCGATCGTCGTTCGTGACGCTGGATTGCGCCTTGACGCCGTTT
CGAGATGCTACTCCCGGAGAGAGGTCGGTGGAGCCCGTGGTTCTGTCTGA
TTGCGTCTTCCGCGTGGAGGCGTGTGTGGATCGGCACGATGCAGCACGAG
CCACCGTATCGCAGGGGCACCTGGATTCCGGAAGCGGAGGTCATCTTGGC
CGGCAGCGGGCCGATCGTCGTTCGTGACGCTGGATTGCGCCTTGACGCCG
TTTCGAGATGCTACTCCCGGAGAGAGGTCGGTGGAGCCCGTGGTTCTGTC
TGATTGCGTCTTCCGCGTGGAGGCGTGTGTGGATCGGCACGATGCAGCAC
GAGCCACCGTATCGCAGGGGCACCTGGATTCCGGAAGCGGAGGTCATCTT
GGCCGGCAGCGGGGTGCCCCTGTTCGATACTCTAAAGCTATACAGCTGAT
TCACGAGTTTACGGGCTCGCTTGTGTGCATCGATGTTCAGGATAGAGCAG
CACATGAAGGGTTTGCGATGAAGGTTGTACTTAAAAATGTCGAGCCTCCG
TCAGGGTGCCCCTGTTCGATACTCTAAAGCTATACAGCTGATTCACGAGT
TTACGGGCTCGCTTGTGTGCATCGATGTTCAGGATAGAGCAGCACATGAA
GGGTTTGCGATGAAGGTTGTACTTAAAAATGTCGAGCCTCCGTCAGTTGT
TGGATCGGTGGAAGAATGGGCGGACACATGGTGGGAGCTCAGATCTCCGG
AGAACATGCGAGTCAGCCAGTTGTTGGATCGGTGGAAGAATGGGCGGACA
CATGGTGGGAGCTCAGATCTCCGGAGAACATGCGAGTCAGCCAGGTGTTG
CATTACGATGAGATTTGCCTTCACTCCAATCGATGGCACCGAAGCATAAC
GGCGCGTCCAACGCCGTACAGCCGGGACGACGCCGCCGAACACGAGAAAA
GGCGGACGGCGGGAGCGAGCGGGGATGTCGACCTTGGATTGGCGCTGACC
CGAAAGGATTGTGCGGGAGAGGTGTTGCATTACGATGAGATTTGCCTTCA
CTCCAATCGATGGCACCGAAGCATAACGGCGCGTCCAACGCCGTACAGCC
GGGACGACGCCGCCGAACACGAGAAAAGGCGGACGGCGGGAGCGAGCGGG
GATGTCGACCTTGGATTGGCGCTGACCCGAAAGGATTGTGCGGGAGAGGT
TGATGCCTCATTTAGTCACTCCCTATTGAGAGTGGTTCCCTTTGACGACC
ATCCTGTGCTAGCGACCCACGAAAGCCCATCGCCCTCTTCGGGCGCTACG
GTAACAGCCGATAGCGGACGATGGGGCGTCGCTGGGGGAGGTCCAGGATG
CAACGTTAGCGGTGGAGGTGGCAGCGGGGGTGGGGGTAGCGGTGTCGCCA
ATGCGACGTTAGCGGAAGGCGTGCTTCGCGGGGGTGATTTAGTCCGGTTG
TGTCACTTGAGTTCCACCGGTTTTCTGACGCATGAAACAATGACGACTCT
TCAAGGGGAGAAGAGAAAAAGAGAGGACATTGACCAGGTTGATGCCTCAT
TTAGTCACTCCCTATTGAGAGTGGTTCCCTTTGACGACCATCCTGTGCTA
GCGACCCACGAAAGCCCATCGCCCTCTTCGGGCGCTACGGTAACAGCCGA
TAGCGGACGATGGGGCGTCGCTGGGGGAGGTCCAGGATGCAACGTTAGCG
GTGGAGGTGGCAGCGGGGGTGGGGGTAGCGGTGTCGCCAATGCGACGTTA
GCGGAAGGCGTGCTTCGCGGGGGTGATTTAGTCCGGTTGTGTCACTTGAG
TTCCACCGGTTTTCTGACGCATGAAACAATGACGACTCTTCAAGGGGAGA
AGAGAAAAAGAGAGGACATTGACCAGGGGTCACGGGGAGGTGAAACCGGG
AACTTCAGGATAATGGGCGACCGCAGTGGTGGGGTTAAAAGTAGGGGTCC
TAGCGGTGATAATTTGGTCAAGGGTGACCCTTTCCTTTACGTGTCTGGCA
CTCCCGAGCGACGACAGAAACTGCAAAACGCCAGCAGCAACTGTCTGTGG
GTCCTGGAGCGCACCCATTGCGCCCTCGGTGGAAGGCCGCTCCGTAGGTA
CGCAATATCTTCGTCGATGCGAGGAAACCCTGTTGCTCACAGCATACATC
GGTTGCAATCGGTCGATGGTAGTGGTCGCACCGTAGGTACATCCGATGAC
ACCATCGCCGATTTCGAAGGGCGACCATTTCATGAATTCAGCGAAGGGCA
GGAGGGGGCAAGAAGCAGCCGCCGTGATAGCGGTTCCTTCAGCAGAAGAA
CTTCAACGGTAGAGGCAGGTGAGTTCTTTTAAGGGTCACGGGGAGGTGAA
ACCGGGAACTTCAGGATAATGGGCGACCGCAGTGGTGGGGTTAAAAGTAG
GGGTCCTAGCGGTGATAATTTGGTCAAGGGTGACCCTTTCCTTTACGTGT
CTGGCACTCCCGAGCGACGACAGAAACTGCAAAACGCCAGCAGCAACTGT
CTGTGGGTCCTGGAGCGCACCCATTGCGCCCTCGGTGGAAGGCCGCTCCG
TAGGTACGCAATATCTTCGTCGATGCGAGGAAACCCTGTTGCTCACAGCA
TACATCGGTTGCAATCGGTCGATGGTAGTGGTCGCACCGTAGGTACATCC
GATGACACCATCGCCGATTTCGAAGGGCGACCATTTCATGAATTCAGCGA
AGGGCAGGAGGGGGCAAGAAGCAGCCGCCGTGATAGCGGTTCCTTCAGCA
GAAGAACTTCAACGGTAGAGGCAGGTGAGTTCTTTTAA back to top
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