prot_H-paniculata_contig30169.8181.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30169.8181.1
Unique Nameprot_H-paniculata_contig30169.8181.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length198
Homology
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 149 bits (377), Expect = 3.310e-38
Identity = 78/197 (39.59%), Postives = 125/197 (63.45%), Query Frame = 0
Query:    2 REAKESHEWEHWKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            ++A+ES EW +W++  E+E    +  G WE      ++ +VG+  ++ +K  + GKV +YK RLVAQGF Q+ GV YT+ YSP+    ++RA +A +A KD E+R  D + A+L+ +++EE+++E PEGF    G V +L   +YGL QAGR WN K    +T +GF ++ ADPC++    DG++  ++ V VD I+
Sbjct:  859 KQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDII 1054          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 147 bits (370), Expect = 2.810e-37
Identity = 77/186 (41.40%), Postives = 122/186 (65.59%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            WKA   +E+H  V   +++K+ RP ++ V+  + ++K K   DG++EKYK RLVA+GF QVEG+ + E ++P++  AS+R LLA AA  D E+   D + AFL+ D+DEE+Y+++P GF+     + KLNKA+YGL QAGR W  K   +  A+GF +  +D  +F K  DG + +++ ++VD +L
Sbjct:  618 WKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDML 802          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A1Y3ET37_9BILA (Reverse transcriptase (Fragment) n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A1Y3ET37_9BILA)

HSP 1 Score: 139 bits (349), Expect = 4.660e-37
Identity = 72/186 (38.71%), Postives = 115/186 (61.83%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            W+   E+E+H   +N VW  +  P  K V+ +  + + K   DG V +YK RLVA+G+ Q  G+ Y E +SP++   ++RALL+ AA +  +L+ FD + AFL   + EEVY++ PEGF++    V KLN+++YGL QA RCWN++  + +   G +QS ADPC+F ++ +    +V +   DGI+
Sbjct:    9 WRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADGSVARYKARLVAKGYMQRPGIDYDETFSPVARFDTVRALLSIAAVERLKLQQFDVKTAFLYGALKEEVYVKQPEGFENGTNQVYKLNRSLYGLKQAPRCWNLRLVEFLRKQGLKQSTADPCLFARMKERSKLLVAIYVDDGIV 194          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: UPI000D464853 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000D464853)

HSP 1 Score: 138 bits (348), Expect = 7.990e-37
Identity = 76/187 (40.64%), Postives = 118/187 (63.10%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGA-VDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            W    + E+     N VW+ +  P   + +G + ++K+K+  DGKVE YK RLVA+GFRQ +G+ Y E +SP++   SIR LLA AA  D E+   D + AFL+  I+E +++E P GF+   G+ V KL ++IYGL QA R WNI+F + + + GF ++  +PC+++KV D  +  +V+ +VD IL
Sbjct:   75 WIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPRGFESQDGSKVCKLKRSIYGLKQASRSWNIRFDEAIKSFGFIKNEDEPCVYKKVSDSAITFLVL-YVDDIL 260          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A6H5KY81_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY81_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 8.340e-37
Identity = 72/187 (38.50%), Postives = 116/187 (62.03%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIAR-PMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            W A  +KE+ GR   G + K+   P  +  +G+E ++  K ++ G +  +K R+VA+GF Q+ G+ +    S     ASI+ ++A A  K  +L H+D +QA++ A ++EE+Y+  PEG     G V K+ +A+YGL Q+GR W ++  D +   G+EQ R DPC+FRKV+DGEV  ++V++VD IL
Sbjct:  117 WVAAMKKEIDGRDKTGTFTKVMELPEGRKAIGSEWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPPAASIKTMIAVATEKGKKLDHWDVKQAYIHATLNEEIYLRFPEGHGSMSGKVVKVERALYGLKQSGREWGVEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIL 303          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 145 bits (366), Expect = 1.010e-36
Identity = 77/186 (41.40%), Postives = 121/186 (65.05%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            WKA   +E+H  V   +++++ RP ++ V+  + ++K K   DG++EKYK RLVA+GF QVEG+ + E ++P++  AS+R LLA AA  D E+   D + AFL+ D+DEE+Y+++P GF      V KLNKA+YGL QAGR W  K   +  A+GF +  +D  +F K  DG + +++ ++VD +L
Sbjct:  941 WKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDML 1125          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D)

HSP 1 Score: 139 bits (351), Expect = 1.070e-36
Identity = 79/188 (42.02%), Postives = 116/188 (61.70%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGF--QHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            W+   + EM     NGVW  +  P   + +G + +YKRK+  DGKVE YK RLVA+G+ Q +GV Y E +SP++   SIR LLA AA  D E+   D + AFL+ +I+E++Y+E P+GF        V KL ++IYGL QA R WNI+F + + + GF Q+  +PC+++K   G     +V++VD IL
Sbjct:  104 WQEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFISSGEDHKVCKLKRSIYGLKQASRSWNIRFNEAVKSFGFIQNMDEPCVYKKD-SGSAVTFLVLYVDDIL 290          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 145 bits (365), Expect = 1.350e-36
Identity = 78/192 (40.62%), Postives = 117/192 (60.94%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQ--HFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVI---DGEVEMVVV-VHVDGIL 198
            WK   + E +  ++NG WE +  P DK +VG+  ++K K   DG VEK+K RLVAQG+ Q EG+ Y E +SP+    SIR+LLA A   D E+   D   AFL  D+ +E+Y++ PEG++    P  V KL K++YGL Q+ RCWN      + + G++Q  AD C++ K +   +G++  V++ +HVD IL
Sbjct:  848 WKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDIL 1039          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 144 bits (363), Expect = 2.520e-36
Identity = 76/183 (41.53%), Postives = 118/183 (64.48%), Query Frame = 0
Query:   13 WKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVD 195
            W+   E E+      GV+E++ RP D+ ++G++ ++K K   DG+VEKYK RLVAQGF QVEG+ Y E ++P++ + SIR LLA AA  D E+   D + AFL+ +++EE+Y+++P G +    AV +L KA+YGL QA R W  K   ++  +GF + +AD C+F K +D     ++ V+VD
Sbjct: 1010 WRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRH-PPIIAVYVD 1191          
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Match: A0A4Q3E614_9SPHI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3E614_9SPHI)

HSP 1 Score: 137 bits (346), Expect = 1.110e-35
Identity = 82/197 (41.62%), Postives = 123/197 (62.44%), Query Frame = 0
Query:    4 AKESHEWEHWKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKRKVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAAKDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGA--VDKLNKAIYGLVQAGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL 198
            +KES+ W H   +EE  M+    N VW+ +  P     +G + ++K K    G +E++K RLVA+GF Q EG+ YT+ +SP+S   S+R ++A  A  D EL   D + AFL+ D++EEVY++ PEGF    G   V KLNK+IYGL QA R W +KF D +T+ GFE++  D C+++KV   ++   +V++VD IL
Sbjct:  140 SKESNLW-HKAMIEE--MNSMAINQVWDLVELPDGLKAIGCKWVFKTKKDSQGNIERHKARLVAKGFTQREGIDYTDTFSPVSKKDSLRTIMALVAHFDFELHQMDVKTAFLNGDLEEEVYMKQPEGFSSSDGEHLVCKLNKSIYGLKQASRQWYLKFHDVITSFGFEENVMDQCIYQKVSGSKI-CFLVLYVDDIL 332          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30169.8181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3AKI0_9AGAM3.310e-3839.59Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A401H123_9APHY2.810e-3741.40Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y3ET37_9BILA4.660e-3738.71Reverse transcriptase (Fragment) n=1 Tax=Trichinel... [more]
UPI000D4648537.990e-3740.64hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A6H5KY81_9PHAE8.340e-3738.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401G4V0_9APHY1.010e-3641.40Retrovirus-related Pol polyprotein from transposon... [more]
UPI001C988E4D1.070e-3642.02hypothetical protein n=3 Tax=Bacteria TaxID=2 RepI... [more]
A0A7D9IUY0_PARCT1.350e-3640.63Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0C2WN23_AMAMK2.520e-3641.53Integrase catalytic domain-containing protein (Fra... [more]
A0A4Q3E614_9SPHI1.110e-3541.62Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..198
e-value: 1.5E-38
score: 132.8
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..195
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 8..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30169contigH-paniculata_contig30169:2200..2793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30169.8181.1mRNA_H-paniculata_contig30169.8181.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30169 2200..2793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30169.8181.1 ID=prot_H-paniculata_contig30169.8181.1|Name=mRNA_H-paniculata_contig30169.8181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp
PREAKESHEWEHWKAVEEKEMHGRVDNGVWEKIARPMDKLVVGTEMLYKR
KVSKDGKVEKYKCRLVAQGFRQVEGVHYTEKYSPMSATASIRALLATAAA
KDGELRHFDAEQAFLDADIDEEVYIEIPEGFQHFPGAVDKLNKAIYGLVQ
AGRCWNIKFCDDMTAIGFEQSRADPCMFRKVIDGEVEMVVVVHVDGIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like