prot_H-paniculata_contig30066.8161.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30066.8161.1
Unique Nameprot_H-paniculata_contig30066.8161.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A813L8P4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813L8P4_POLGL)

HSP 1 Score: 63.2 bits (152), Expect = 9.470e-9
Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 0
Query:    1 LIALDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVEL---LAYLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAKTKAVPP 141
            L+ LD  NA N V R+ +LE+     P L  +   CY ++P+ ++F   T     ISS TG+ QGD LGP  F   + P + + R + E  G +L     YLDD   A G++ E    A+  +  E A IG+Q+   K + V P
Sbjct:   72 LLKLDFANAFNCVSRSQVLEQTRRHFPSLARWSQWCY-SRPSKLVFGSYT-----ISSETGVQQGDPLGPLLFSAAIQPIVEQLR-RLEVNGKKLDLSTFYLDDGFLA-GDI-EVVAAALRLVQSEGAGIGLQLQLGKCQLVLP 206          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A813GWS5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GWS5_POLGL)

HSP 1 Score: 61.2 bits (147), Expect = 4.880e-8
Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 LIALDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVEL---LAYLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAKTKAVPP 141
            L+ LD  NA N V R+ +LE+     P L  +   CY ++P+ ++F         ISS TG+ QGD LGP  F   + P + + R + E  G +L     YLDD   A G++ E    A+  +  E A IG+Q+   K + V P
Sbjct: 1516 LLKLDFANAFNCVSRSQVLEQTRRHFPSLARWSQWCY-SRPSKLVFGSYA-----ISSETGVQQGDPLGPLLFSAAIQPIVEQLR-RLEVNGKKLDLSTFYLDDGFLA-GDI-EVVAAALRLVQSEGAGIGLQLQLGKCQLVLP 1650          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A5A8C0I4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C0I4_CAFRO)

HSP 1 Score: 60.5 bits (145), Expect = 8.960e-8
Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 0
Query:    2 IALDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVEL 95
            +ALD TNA NSV R  ++EEV      L P V   Y +  + ++F  D GE  ++ SN G+ QGD    A F + V P + +C     P+G EL
Sbjct:  790 VALDMTNAYNSVSRRAMIEEVRRLDEKLVPAVLALYGSS-SPLLFATDEGEVFELESNRGVRQGDPAAGALFAIAVHPLVDEC-----PVGEEL 877          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A813HER3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HER3_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 3.840e-7
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 0
Query:    1 LIALDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVEL-LA--YLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAK 135
            L+ LD  NA + V R+ +LE+     P L  +   CY ++P+ ++F   T     ISS TG+ QGD LGP  F   + P + + R + E  G +L LA  YLDD   A G++ E    A+  +  E A IG+Q+   K
Sbjct:  212 LLKLDFANAFHCVSRSQVLEQTRRHFPSLARWSQWCY-SRPSKLVFGSYT-----ISSETGVQQGDPLGPLLFSAAIQPIVEQLR-RLEVNGKKLDLATFYLDDGFLA-GDI-EVVAAALRLVQSEGAGIGLQLQLGK 340          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A1X7UY46_AMPQE (Reverse transcriptase domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UY46_AMPQE)

HSP 1 Score: 58.5 bits (140), Expect = 3.920e-7
Identity = 41/133 (30.83%), Postives = 68/133 (51.13%), Query Frame = 0
Query:    4 LDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVELLAYLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAKT 136
            +D +NALNS+ R+ +  EV  R P L+ +V   Y  + +H++F   T     I S+ G+ QGD LGP  F + + P + K       L +    YLDD V   G L + +  A+  +  +   +G+ +N +K+
Sbjct:  326 IDFSNALNSIDRSALFNEVRTRLPSLSSWVEFSYGVQ-SHLLFGTHT-----ILSSCGVQQGDPLGPLLFSLLLHPIVEKISRDVPGLHLNGW-YLDDGV-LCGSLKDIS-SALSIITEDGPLVGLSLNRSKS 449          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A813F3X0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F3X0_POLGL)

HSP 1 Score: 58.2 bits (139), Expect = 5.550e-7
Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 0
Query:    1 LIALDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVEL---LAYLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAKTKAVPP 141
            L  LD  NA N V R+ +LE+     P L  +   CY ++P+ ++F   T     ISS TG+ QGD LGP  F   + P + + R   E  G +L     YLDD   A G++ E    A+  +  E A IG+Q+   + + + P
Sbjct:  760 LFKLDFANAFNCVSRSQVLEQTRRHFPSLARWSQWCY-SRPSKLVFGSYT-----ISSETGVQQGDPLGPLLFSAAIQPIVEQLR-CLEVNGKKLDLSTFYLDDGFLA-GDI-EVVAAALRLVQSEGAGIGLQLQLGQLETLFP 894          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A418RFW0_9GAMM (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Methylococcales bacterium TaxID=2304002 RepID=A0A418RFW0_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 4.760e-6
Identity = 39/135 (28.89%), Postives = 62/135 (45.93%), Query Frame = 0
Query:    1 LIALDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVELLAYLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAK 135
            ++A+DC NA NS++R  I   +    P L  +    Y+ KP  +     +     I S+TG+ QGD LGP  F + V   L + R     + V+  AYLDD+   I     + +     L     ++G+  N+ K
Sbjct:  814 ILAMDCKNAFNSIRRGHISNAINSVCPNLISYFTWAYE-KPVELKSSFHS---TPILSSTGVRQGDPLGPLLFSLGVARALDRVRNIHRHVVVQ--AYLDDVF--IYGTVSDCISTAKLLKYHFVQLGLHFNDNK 940          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: S9VX95_9TRYP (SLACS reverse transcriptase n=3 Tax=Strigomonas culicis TaxID=28005 RepID=S9VX95_9TRYP)

HSP 1 Score: 54.7 bits (130), Expect = 8.390e-6
Identity = 44/144 (30.56%), Postives = 67/144 (46.53%), Query Frame = 0
Query:    1 LIALDCTNALNSVKRAVILEEVAIRTPGLTPF--VAKCYQAKPAHI-IFQMDTG-----ERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVELLAYLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAKT 136
            L+ALD TNA NS+ R  IL      TP + P   +      +PA + ++    G         + S  GI QG  LGP  F + +   L     +   +GV+++AYLDD+    GE +     A+  +   L  +G+ IN AK+
Sbjct:  192 LVALDATNAYNSISRHAILA-ACYATPAMQPAWPLVDLLLGQPARLGVYDGAAGGGDGARVLDMLSTRGIRQGMVLGPLLFALAMHGALAPLLPRLAAMGVDVVAYLDDVHLLGGEASVR--AAVPLVCDALRGVGLVINTAKS 332          
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Match: A0A812E4G5_SEPPH (Hypothetical protein n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812E4G5_SEPPH)

HSP 1 Score: 52.8 bits (125), Expect = 2.200e-5
Identity = 41/132 (31.06%), Postives = 62/132 (46.97%), Query Frame = 0
Query:    8 NALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDTGERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVELLAYLDDLVPAIGELTEENLRAIHFLVRELARIGVQINNAKTKAV 139
            NA NS++R   LE    RTP +       Y + P+ +I   +      +SS TGIHQGD LGP  F M V    R     F       + YLDD    +G   E     +  ++  L+ +G++IN+ K++ +
Sbjct:    3 NAFNSIRRDHALEVWHQRTPFIFKLAHLSY-SNPSMLIASDNI-----VSSATGIHQGDLLGPLLFAMAVDGVARSIASPFN------IWYLDDTT--LGGSIEPVSADLRRVIPALSLLGLEINSFKSEII 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30066.8161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A813L8P4_POLGL9.470e-934.72Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813GWS5_POLGL4.880e-834.03Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A5A8C0I4_CAFRO8.960e-838.30Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A813HER3_POLGL3.840e-735.51Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A1X7UY46_AMPQE3.920e-730.83Reverse transcriptase domain-containing protein n=... [more]
A0A813F3X0_POLGL5.550e-733.33Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A418RFW0_9GAMM4.760e-628.89Reverse transcriptase domain-containing protein (F... [more]
S9VX95_9TRYP8.390e-630.56SLACS reverse transcriptase n=3 Tax=Strigomonas cu... [more]
A0A812E4G5_SEPPH2.200e-531.06Hypothetical protein n=1 Tax=Sepia pharaonis TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..139
e-value: 1.2E-11
score: 44.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..150
score: 13.119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30066contigH-paniculata_contig30066:1769..2218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30066.8161.1mRNA_H-paniculata_contig30066.8161.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30066 1769..2218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30066.8161.1 ID=prot_H-paniculata_contig30066.8161.1|Name=mRNA_H-paniculata_contig30066.8161.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
LIALDCTNALNSVKRAVILEEVAIRTPGLTPFVAKCYQAKPAHIIFQMDT
GERRKISSNTGIHQGDGLGPAFFCMPVGPTLRKCREQFEPLGVELLAYLD
DLVPAIGELTEENLRAIHFLVRELARIGVQINNAKTKAVPPMSHIPTGRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom