mRNA_H-paniculata_contig30052.8159.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 372 bits (954), Expect = 7.300e-114 Identity = 190/310 (61.29%), Postives = 234/310 (75.48%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTTK-VGRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSL 927
QF+ VANVTYP VYQ FLDG+ V NF LSW+LS CI+ V FH+RL++STIGP+V + L TY R N G TL +H+SMV++LT VYSSVSSTLFQ F+C+ + DG+ YLRADYRI CDSS+H+ALQ+YAG M+++YTVGIP Y +LLFR DVL RE R+ ST+ LWKPY+P FYYE+IECGRR+LLAGVVVFIYPNTA QIAITL++ F+ VSE LAPY SRWDTW+SR GHA++F+SMYV LLLKVDVS E SQR+FEV+LV A+A M+ V++ E V + C+L
Sbjct: 1739 QFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATR-INRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 357 bits (916), Expect = 5.470e-112 Identity = 177/311 (56.91%), Postives = 231/311 (74.28%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTTKV-GRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSLR 930
QF+ ANVTYP VYQ FL+G+DV NF +SW+LS C++++ FH+RL++STIGP++ + L TY G R N G ATL +H+SMV++L F+VYS VSS +FQ F+CD+++ G YLRADYRIECDSS+H+ ++YAGFMI+LY VGIP FY LL R DVL GRE R+ S ++LW+PY+P +YYE+IECGRRILL G+VVFIYPNTAAQIAITL++TV F +SEAL PY WDTWVSR HA++F+S+YV LLLKVDVS E +SQ++FE +LV A+A M+ V+ E + + C R
Sbjct: 689 QFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSR-INRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR 998
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 350 bits (899), Expect = 1.660e-109 Identity = 179/310 (57.74%), Postives = 226/310 (72.90%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTT-KVGRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSL 927
QF+ VAN+ +P VYQ FLD +++ NF L W+LS C+ +V FH+RL++STI P+VG+ L Y R + + L KH+S+V++LTF+VY+SVS+ LFQ F+C+++DD K YLRADYRIECDS +H A Q+YAGFMI+LYTVGIP Y LFR DVL + RE RI T LWKPY+P FYYE+IEC RR+LLAGVVVFIYPNTAAQIA+ L++ V F +SEALAPY SRWDTW+ R GHA++ +SMYV LLLKVDVS E A+SQR+FE +LV A+ MV VVL EV+ A SL
Sbjct: 649 QFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSE-DLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISL 957
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 352 bits (904), Expect = 9.170e-109 Identity = 174/311 (55.95%), Postives = 231/311 (74.28%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTTK-VGRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSLR 930
QF+ VANVTYP VY+ FLDG+DV NF LSW+LS CI ++ FH+RL+ ST+ P++G+ L TY N G +L KH+S+V++LTF++YSSVS+TLF+ F C++++DG YLRADY I+CDSS+H+A Q+YAGFM+++Y VGIP YA LLFR VL RE R ST+ LWKPY+P FYYE+IECGRR+LLAGVVVFI+PNTAAQIAITL++ F+ VSE LAP+ S+WD W++RTGH ++F+SMY+ LLLKVDVS E A SQR++E++LV A+A M+ V+ E + SL+
Sbjct: 928 QFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAA-VSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLK 1237
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 355 bits (912), Expect = 1.420e-108 Identity = 176/312 (56.41%), Postives = 235/312 (75.32%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTTKVGRESDVRIR--STTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSLR 930
QF+ VANVTYP VYQ+FL+G++V NF LSW+LS C+++V FH+RL+M+TIGP+ +L TY R G + TL N R KH+ MV++LTF VYSSVS+TLF+ F+C+ ++DGK YL ADYRIECDSS+H+ ++YAGFM++LYT GIP Y+ LLFR DVL + D+R R ST+ LWKPY+P FYYE++EC RR+LLAGVVVFIYPN++AQIAITL++ F+ +SE LAPY SRWDTW++R GH ++ SMY+ LLLKVDVS E ++SQ +FE +LV+A+ MV V + E + +A +LR
Sbjct: 1283 QFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATE-TLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALR 1593
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 355 bits (910), Expect = 6.380e-108 Identity = 177/310 (57.10%), Postives = 230/310 (74.19%), Query Frame = 1
Query: 4 FSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTTKV-GRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSLR 930
F+ ANVTYP VYQ L+G+DV NF +SWI+S C++ + FH+RL++STIGP++ + L TY G R N G ATL +H+SMV++L F+VYSSVSS +FQ F+CD+++ G YLRADYRIECDSS+H+ ++YAGFMI+LY VGIP FY LLFR DVL GRE R+ S ++LW+PY+P +YYE+IECGRRILL G+VVFIYPNTAAQIAITL++TV F +SEAL PY WDTWVSR HA++F+S+YV LLLKVDVS E +SQ++FE +LV A+A M+ V+ E + + C R
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLLSTIGPIMALLCLAATYRAGSR-INRGNAATLQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR 2736
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI) HSP 1 Score: 335 bits (858), Expect = 6.850e-107 Identity = 170/311 (54.66%), Postives = 229/311 (73.63%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTT-KVGRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSLR 930
+F+ VANVTYP VYQ L +D+ NF LSWILS C++ FH+RL++STIGP+VG+ +L TY + G L + KH+SMV++LTF VYS+VS+ LF+ F+C+++ + IYLR+DYRIECDS +H+A +I AGFMI+LYTVGIP YA L+FR +L + RE R+ ST+ LWKPY+P FYYE+ ECG R+LLAGVVVFIYP+TAAQIA+TL++ F+ VSE L+PY S+WD WV+R GH ++F+SM+V LLLKVDV+ EDA+SQ++FE +LV A+ MV VV+ E + + SLR
Sbjct: 371 EFTSVANVTYPSVYQDLLTALDIFNFDLSWILSVGCVVRTDFHDRLLVSTIGPIVGLMLLTCTYACALQIHQGSSQ-NLQSVWNKHVSMVLLLTFFVYSNVSAILFKAFACEQLGES-IYLRSDYRIECDSPKHQAFKINAGFMIVLYTVGIPTLYAGLVFRDRHLLKKDEADREDTPRVTSTSGLWKPYRPSVFYYEVFECGWRVLLAGVVVFIYPDTAAQIAVTLMIAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAIVLTSSLR 679
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 349 bits (895), Expect = 1.520e-106 Identity = 179/311 (57.56%), Postives = 228/311 (73.31%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTTK-VGRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSLR 930
QF+ VANVTYP VYQ LD +DV NF LSW+LS C++++ FH RL++STI P+V + +L TY R G P+ L KH+++V++LTF VYSSVSSTLF+ F+CD +D K YLRADY IEC+SS H +Q+YAGFMI++YTVGIP YA LLF++ DVL + RE R++S ++LW+PY+P FYYE+IEC RR+LLAGVVVFIYPNTAAQIA+TL++ F +SE LAPY SRWDTW+SR GH ++FLSMYV LLLKVDVS E A+SQ +FE +LV + M+ VL E A SLR
Sbjct: 1184 QFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEK-LNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLR 1493
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 344 bits (883), Expect = 3.850e-105 Identity = 171/307 (55.70%), Postives = 227/307 (73.94%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTT-KVGRESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVA 918
QF+ ANV YPGVYQ FLDG+ V F L W++S C+L++GFH RL+ +TIGP+ + +L TY R N + L KH+ + ++LTF+VYSSVSSTLF+ F+CD+++DGK YLR DYRIECDSS+H+ Q+YAGFMI+LY +GIP+ Y+ILLF+ +VL K R+ R++ST+ LW+PY+P FYYE+IECGRRILL G+VVFIYPNTAAQ+AITL++ FF +SEA++PY SRW+TWV+R GH ++ +SMYV LLLKVDVS E A SQ +FE +LV +A M+ V+ E VA
Sbjct: 1099 QFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATR-INREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 337 bits (864), Expect = 7.290e-102 Identity = 173/312 (55.45%), Postives = 228/312 (73.08%), Query Frame = 1
Query: 1 QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTIGPLVGMAILGITYIVGGRGRNGGPDATLGNFRQKHLSMVVILTFMVYSSVSSTLFQMFSCDKVDDGKIYLRADYRIECDSSRHEALQIYAGFMIILYTVGIPVFYAILLFRTFDVLTTKVG--RESDVRIRSTTSLWKPYQPHRFYYELIECGRRILLAGVVVFIYPNTAAQIAITLVLTVFFIFVSEALAPYESRWDTWVSRTGHAIIFLSMYVGLLLKVDVSTEDATSQRLFEVILVLANAFMVCVVLFEVVAVACSLR 930
QFS VANVTYP VYQ FLDGV++LNF + WI S C++EV FH RL+++TIGPLV +A+L ITY V R R+ G +A L R KH+SMV+++TF+VYSSVS+T+FQ F+C+ +DD K YLRADYRIECDSS H+A Q++AG MI++Y VGIP+FY LL++ VL ++ R++ +++ + LW PY+P RFYYE+IEC RR+ L GVVVFIYPNTAAQ+A+TL++ F+ S LAPY S+WD +S GH I+F SMY LL KVDVS E A SQ +F +LV A+A MV V+ E + + S R
Sbjct: 1447 QFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKR-RSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30052.8159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30052.8159.1 >prot_H-paniculata_contig30052.8159.1 ID=prot_H-paniculata_contig30052.8159.1|Name=mRNA_H-paniculata_contig30052.8159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp QFSEVANVTYPGVYQHFLDGVDVLNFHLSWILSTECILEVGFHERLIMSTback to top mRNA from alignment at H-paniculata_contig30052:700..1629- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30052.8159.1 ID=mRNA_H-paniculata_contig30052.8159.1|Name=mRNA_H-paniculata_contig30052.8159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=930bp|location=Sequence derived from alignment at H-paniculata_contig30052:700..1629- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30052:700..1629- >mRNA_H-paniculata_contig30052.8159.1 ID=mRNA_H-paniculata_contig30052.8159.1|Name=mRNA_H-paniculata_contig30052.8159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig30052:700..1629- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |