prot_H-paniculata_contig29842.8105.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29842.8105.1
Unique Nameprot_H-paniculata_contig29842.8105.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A6S7KSC5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KSC5_PARCT)

HSP 1 Score: 104 bits (260), Expect = 5.250e-24
Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 0
Query:   45 EIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQI--LAPEGRSGNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD 198
            E K  I  +F+ +DLG +S +LG+ ++RDR + T+TI Q  Y+  VLKR+   EC+ V TP+E   Q   L+ +    N  EY+ ++G L Y +T TRPD+A AV   ++ M  P QE +   K    Y+    + GI+F  K     L G+ DAD
Sbjct:   44 EEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDETPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDAD 199          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A177T2I3_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T2I3_9BASI)

HSP 1 Score: 108 bits (271), Expect = 5.530e-24
Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 0
Query:   45 EIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQILAP-EGR-SGNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD 198
            E+K  ++QRF+ KDLG    +LGIE+RRDR    +T+ QG Y  EVL R+G   C+    P++ K+ ++   EG  + +   YR +VG LMY   GTR D+A+ V    R   DP +E     KH    +    D  ++F G S+G  +  +VDAD
Sbjct: 1043 ELKRQLAQRFKGKDLGEAHHLLGIEIRRDREKKILTMSQGRYAREVLARFGMSNCKPAKLPMQSKISLMPRREGEPAADKATYRAIVGSLMYLVMGTRGDLAFYVSLLGRFASDPSEEHMAAAKHLMRNIKLTADAKLTFDG-SDGLRITAYVDAD 1197          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 107 bits (266), Expect = 2.580e-23
Identity = 60/156 (38.46%), Postives = 88/156 (56.41%), Query Frame = 0
Query:   45 EIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQI--LAPEGRSGNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD 198
            E K  I  +F+ +DLG +S +LG+ ++RDR + T+TI Q  Y+  VLKR+   EC+ V TP+E   Q   L+ + R  N  EY+ ++G L Y +T TRPD+A AV   ++ M  P QE +   K    Y+    + GI+F  K     L G+ DAD
Sbjct: 1050 EEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDAD 1205          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: UPI0019CB3DD6 (DDE-type integrase/transposase/recombinase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI0019CB3DD6)

HSP 1 Score: 105 bits (263), Expect = 6.570e-23
Identity = 61/168 (36.31%), Postives = 94/168 (55.95%), Query Frame = 0
Query:   32 VEEELFVKLPPEY-EIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVE-GKVQILAPEGRSGNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDA 197
            V++ L V  P E   +K  +S RF+  DLG +   LG+++ RDR + TI + Q S+    L R+G  +C+ + TP+  GK+        S + TEY+ ++G LMY ST TRPD+AYA+ + +R   +P Q      KH   YLS   D+ +  GG S+   ++ +VDA
Sbjct: 1190 VDDLLIVAKPKELISLKLQLSSRFKMHDLGEVKFYLGMKIERDRKSRTIYLSQMSFAEATLSRFGMSQCKPLGTPMAVGKLSKRTESESSCDETEYQSILGSLMYLSTTTRPDLAYALGKLSRYSHNPSQAHMKALKHVLRYLSGTKDMRLCLGGDSDTTQIKCYVDA 1357          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A8H6XNZ2_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6XNZ2_9AGAR)

HSP 1 Score: 104 bits (260), Expect = 1.640e-22
Identity = 59/159 (37.11%), Postives = 90/159 (56.60%), Query Frame = 0
Query:   47 KHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQIL-----APEGRSGNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSL--EGFVDAD 198
            K  I   F TKDLG   +++GIE+RRDR +GTIT+ Q  Y+  +L +YG  + + + TP++  V +      APE  +    +Y+ ++G LMYA+  TRPDIAYAV   ++   +P  E +  CK    YLS   + G+ +G  S+   +   G+ DAD
Sbjct: 1108 KAEIEGLFDTKDLGEPRKIIGIEIRRDRGSGTITLSQLHYVETLLAKYGLTDAKPLATPMDPNVTLRKVPADAPEAPAELRGQYQSIIGGLMYAAICTRPDIAYAVTTLSQYCSNPGPEHWSACKRVLRYLSGTRNYGLVYGNTSDSDEIVSTGYSDAD 1266          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A699I3C7_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699I3C7_TANCI)

HSP 1 Score: 103 bits (258), Expect = 2.700e-22
Identity = 68/215 (31.63%), Postives = 109/215 (50.70%), Query Frame = 0
Query:   15 DFELEGMDVDAAYLNAPVEEELFVKLPPE-----------------------YEIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQILAPE-GRSGNSTE------YRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFG-GKSNGHSLEGFVDAD 198
            D ELE +DV   +L+  +EEE++V+ P +                        E+K  +S  F  KDLG+  R+LG+E+RRDR  G +T+ Q  YI +VLK++     + VPTP+    ++ + E  +S    E      Y   VG LMYA   TRPD+A+ V   +R M +  +  +   K+   Y     ++G+SF  G+++ + + G+VD D
Sbjct:  456 DLELEQLDVKTTFLHGHLEEEIYVEQPEDGSFLYLVLYVDDMLIAAPNKDQIRELKDQLSNEFDMKDLGAAKRILGMEIRRDRKMGKLTLSQIDYILKVLKKFNMSSYKPVPTPLAPHFKLSSHECPKSEEDKEDMSRVPYTSAVGSLMYAMVCTRPDLAHVVSVVSRYMHNLGKMHWEAVKYILGYWKETSNIGLSFEKGRASPNGVIGYVDFD 670          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A8H7TXH5_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7TXH5_9APHY)

HSP 1 Score: 103 bits (258), Expect = 2.990e-22
Identity = 62/159 (38.99%), Postives = 87/159 (54.72%), Query Frame = 0
Query:   45 EIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQI----LAPEGRSGNSTE-YRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD 198
            ++KH++  RF   DLG L  +LG EV R+R   TI++ Q SYI  +L R+G  E   +  P++  + +    +  E R   S + Y  +VG LMYA+ GTRPDIA+AV   AR M  P    +   K    YL    DL ++FG  S  H+L G+ DAD
Sbjct:  928 KLKHDLGSRFEIVDLGELRWLLGFEVHRNRSARTISLSQASYIDTLLDRFGMVEAHTLTVPLDSHINLFDIEITNEDRHEMSRKPYARLVGSLMYAAIGTRPDIAFAVSTLARFMATPAPVHWDAAKRVLRYLKGTRDLRLTFGTSS--HTLVGYSDAD 1084          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A8H8NTR4_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H8NTR4_9AGAM)

HSP 1 Score: 103 bits (257), Expect = 4.310e-22
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = 0
Query:   26 AYLNAPVEEELFVKLPPEY--EIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQILAPEGRSGNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD 198
            A + A V++ L    P  Y  EIK  + + F   DLG     +G+E+ RDR  GT+ I Q  YI ++L R+G  +C+   TP+   + +   +  + + T Y+ +VG LMYA   TRPDIA+A    A+   +P  E +   K    YL     +GI + G S    LEG+VDAD
Sbjct: 2066 AIILAHVDDMLLAGKPLTYLEEIKSKLRESFELVDLGEAKMFVGVEIERDRNEGTLKISQKQYINDILTRFGMSDCKSCETPMAESLDLPKLDSPTIDRTHYQRLVGSLMYAMISTRPDIAFATGLLAQHAANPGDEHWLAGKRVLRYLQGTKSVGIIYRG-SEVKDLEGYVDAD 2239          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: UPI0008707D25 (uncharacterized protein LOC108868555 n=1 Tax=Pyrus x bretschneideri TaxID=225117 RepID=UPI0008707D25)

HSP 1 Score: 100 bits (249), Expect = 7.160e-22
Identity = 68/205 (33.17%), Postives = 100/205 (48.78%), Query Frame = 0
Query:    1 MSTLRTVFCLVVEHDFELEGMDVDAAYLNAPVEEELFVKLPPEYEI------KHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQILAPEGRS-GNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD 198
            M T+R +  + + H + L  +DV+ A+LN  ++EE+F+ LPP   +      K  ++ RF+ KDLG L   LGIEV R R    I++ Q  Y  E+L   GF   +    PVE  +     +G+   N++ YR MVG        TRPD+ Y VH  ++ M+ P Q         F Y+   P  GI     +    L+ F DAD
Sbjct:   72 MMTVRVLLSVAILHGWHLHQLDVNNAFLNGDLDEEVFMSLPPGNNLEDIENTKLFLANRFKLKDLGQLKYFLGIEVARSRHG--ISLSQRKYALEILDDVGFLGVKPSRFPVEQNLSFTQLDGKLLDNASAYRRMVG--------TRPDLTYIVHILSQFMDKPRQPHLEAAHKVFKYIKRTPGQGIIL-PSTGSLQLQAFCDAD 265          
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Match: A0A8H7LJZ0_9AGAM (Gag-polypeptide of LTR copia-type n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7LJZ0_9AGAM)

HSP 1 Score: 102 bits (253), Expect = 1.280e-21
Identity = 62/175 (35.43%), Postives = 90/175 (51.43%), Query Frame = 0
Query:   26 AYLNAPVEEELFVKLPPEY--EIKHNISQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECRGVPTPVEGKVQILAPEGRSGNSTEYRGMVGLLMYASTGTRPDIAYAVHQAARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD 198
            A + A V++ L    P  Y  EIK  + + F   DLG     +G+E+ RDR  GT+ I Q  YI ++L R+G   C+   TP+   + +   +  + + T Y+ +VG LMYA   TRPDIA+A    A+   +P  E +   K    YL     +GI + G S    LEG+VDAD
Sbjct:  411 AIILAHVDDMLLAGKPLTYLEEIKSKLRESFELVDLGEAKMFVGVEIERDRNEGTLKISQKQYINDILTRFGMSNCKSCETPMAELLDLPKLDSPTIDRTHYQRLVGSLMYAMISTRPDIAFATGLLAQHAANPGDEHWLAGKRVLRYLQGTKSVGIIYRG-SEVKDLEGYVDAD 584          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29842.8105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7KSC5_PARCT5.250e-2437.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T2I3_9BASI5.530e-2437.82Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]
A0A7D9IUY0_PARCT2.580e-2338.46Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI0019CB3DD66.570e-2336.31DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A8H6XNZ2_9AGAR1.640e-2237.11Uncharacterized protein n=1 Tax=Mycena sanguinolen... [more]
A0A699I3C7_TANCI2.700e-2231.63Retrovirus-related Pol polyprotein from transposon... [more]
A0A8H7TXH5_9APHY2.990e-2238.99Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H8NTR4_9AGAM4.310e-2235.43Copia-like polyprotein/retrotransposon n=1 Tax=Rhi... [more]
UPI0008707D257.160e-2233.17uncharacterized protein LOC108868555 n=1 Tax=Pyrus... [more]
A0A8H7LJZ0_9AGAM1.280e-2135.43Gag-polypeptide of LTR copia-type n=1 Tax=Rhizocto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 45..106
e-value: 3.1E-7
score: 30.3
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 45..182
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 45..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29842contigH-paniculata_contig29842:235..1152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29842.8105.1mRNA_H-paniculata_contig29842.8105.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29842 1..1341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29842.8105.1 ID=prot_H-paniculata_contig29842.8105.1|Name=mRNA_H-paniculata_contig29842.8105.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MSTLRTVFCLVVEHDFELEGMDVDAAYLNAPVEEELFVKLPPEYEIKHNI
SQRFRTKDLGSLSRVLGIEVRRDRPNGTITILQGSYICEVLKRYGFYECR
GVPTPVEGKVQILAPEGRSGNSTEYRGMVGLLMYASTGTRPDIAYAVHQA
ARRMEDPCQEDFGTCKHNFLYLSTMPDLGISFGGKSNGHSLEGFVDAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like