mRNA_H-paniculata_contig2958.8041.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2958.8041.1
Unique NamemRNA_H-paniculata_contig2958.8041.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: D7FUV7_ECTSI (Mevalonate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV7_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.250e-87
Identity = 162/238 (68.07%), Postives = 182/238 (76.47%), Query Frame = 3 
Query:    9 RRPSVTELEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHPAPTAAVFDAIGAVADEFLERAATAT-------AAEGGAGTG--------LTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTIL-GADISGRKEALVKDLTAGEGFRCYESSLGGPGVLYHDGGMSP 674
            RRPS +ELE INAWA+AGETVLHGTPSGLDNTVSCYGGAI+F+KGM GA N TEPI GFPPLPILLTNTLVPKNT ALVAGVR L EAH   T A FDAIGA+A EFL+RAA +        AAE G G          LTAE VGELAEMN +LLCALGVGHPALERVC V   +GC+SKLTGAGGGGCA+TIL G D+   K +LV+ +  GEGF+CYE+S+GG GVL+H   + P
Sbjct:  273 RRPSGSELERINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFVKGMDGAANTTEPIPGFPPLPILLTNTLVPKNTGALVAGVRRLLEAHRPATTATFDAIGAIAAEFLDRAAASVPAATPVAAAECGDGAAAPAAPAQPLTAECVGELAEMNHRLLCALGVGHPALERVCEVASAHGCRSKLTGAGGGGCAVTILSGEDLC--KASLVEAML-GEGFKCYETSIGGDGVLFHGDAVPP 507
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: A0A835Z5H2_9STRA (Mevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H2_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.280e-48
Identity = 116/231 (50.22%), Postives = 143/231 (61.90%), Query Frame = 3 
Query:    6 GRRPSVTE---LEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVP-KNTRALVAGVRCLREAHPAPTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGAD-ISGRKEALVKDLTAGEGFRCYESSLGGPGVLYH-DGGMSPNA 680
            G+R  V +   LE +NAWAYA ET++HG PSGLDNTVSCYGG +R+++        TE +A FP L +LLT+T V  ++TR LVA V  L    P  TA V +AI A+A +FL             G  +TAE VG L  MN  LL ALGVGH +L+ VC      GC SKLTGAGGGGCALT+L AD +S  +  L+++L A  GFRCY S LGG GVL H D   +P A
Sbjct:  210 GKRERVWQPEGLETLNAWAYAAETLIHGNPSGLDNTVSCYGGVLRYVR----EPRSTETVATFPQLSMLLTDTRVAGRSTRRLVAHVATLLGRCPDVTARVLEAIDAIAKQFLA-----------CGDEMTAEEVGALMVMNHHLLGALGVGHASLDAVCAAAARRGCWSKLTGAGGGGCALTLLRADLVSAARADLIEELQA-RGFRCYASDLGGQGVLLHADAHCAPRA 424
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: A0A7S4B5A5_CHRCT (Mevalonate kinase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5A5_CHRCT)

HSP 1 Score: 183 bits (464), Expect = 2.140e-47
Identity = 103/221 (46.61%), Postives = 136/221 (61.54%), Query Frame = 3 
Query:   12 RPSVTELEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHPAPTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGAD--ISGRKEALVKDLTA---GEGFRCYESSLGGPGVLYHD 659
            RPS T  + INAWAY+ E +LHGTPSGLDN+VSCYG A++ M+       + EP+  FP L +LLTNT VP+ TR  V+GVR L E+ P+ T  VF+AI +VAD FL+  +      GG+  G     +G L  MN  LL  LGV  PAL+ VC V   +G  +KLTGAGGGGCA +ILG +  +    E  V+  +       F CY +++GG GVL+H+
Sbjct:  220 RPSPTAKQLINAWAYSSECILHGTPSGLDNSVSCYGEAVKLMRAAPAEALLFEPVKRFPKLQVLLTNTKVPRKTREQVSGVRRLHESLPSVTIPVFEAISSVADAFLDLIS------GGSVEGAALAQIGRLVSMNHALLTVLGVSAPALQLVCDVAGKHGLPTKLTGAGGGGCAFSILGGEEELDSSMETRVQRCSRTLRSHRFDCYRTTVGGEGVLWHE 434
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: R1EVA3_EMIHU (Mevalonate kinase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EVA3_EMIHU)

HSP 1 Score: 168 bits (426), Expect = 8.860e-42
Identity = 101/221 (45.70%), Postives = 133/221 (60.18%), Query Frame = 3 
Query:   15 PSVTELEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKG--MGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHPAPTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEA-----LVKDLTAGEGFRCYESSLGGPGVLYH 656
            PS    E IN WAY  E +LHGTPSGLDN VSC GG +R  +     GA    EPIA   P+ +L+TNT VP++TR LVA VR LR+A PA T A+F A+ +VA+ FL   A++ A        L+AE + EL  +N  LL +LGV   ALE V      +G  +KLTGAGGGGCA++++G   + R EA       +     +G+ C+ +S+GG GVLYH
Sbjct:  254 PSSAARELINGWAYCAECILHGTPSGLDNAVSCEGGGMRLQRAGRESGAALRFEPIASLRPMTVLVTNTNVPRSTRRLVAKVRALRDAQPALTEALFGAVASVAEAFLAATASSEAR-------LSAE-LPELVRINHGLLVSLGVSGAALEDVVATAAEHGLATKLTGAGGGGCAISVVGVGGAARGEASKSADAARRRLEAKGYNCHLTSVGGDGVLYH 466
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: UPI001E1D85FC (mevalonate kinase n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI001E1D85FC)

HSP 1 Score: 159 bits (403), Expect = 5.380e-40
Identity = 97/229 (42.36%), Postives = 130/229 (56.77%), Query Frame = 3 
Query:   12 RPSVTELEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHPAPTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEA---VGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEALVKDLTAGEGFRCYESSLGGPGVLYHDGGMSPNALLQ 689
            R +  +LE IN WA+ GE V+HG PSG+DN VS +GGA+R+ +G         P+   P L ILLTNT VP++T+ALVA VR      P   A + D++ A++ E        T A      GL  E    + EL +MNQ  L ALGVGH +L+++C V +  G  SKLTGAGGGGC +T+L  D+      + K   AG GF C+E+S+G PGV  H       A+ Q
Sbjct:  131 RWATEDLEFINKWAFQGERVIHGNPSGVDNAVSTWGGALRYQRGQ------MTPLKRPPALKILLTNTQVPRSTKALVANVRSRLIKFPKIVAPLLDSMDAISLECERVLGETTEA------GLAPEQYRMLEELIDMNQHHLNALGVGHTSLDQLCQVTRAQGLHSKLTGAGGGGCGITLLRPDVGQPTVEVTKQALAGCGFDCWETSIGAPGVSIHQAASLDTAIRQ 347
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: A0A197K0J9_9FUNG (Mevalonate kinase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K0J9_9FUNG)

HSP 1 Score: 160 bits (406), Expect = 5.890e-40
Identity = 90/203 (44.33%), Postives = 118/203 (58.13%), Query Frame = 3 
Query:   39 INAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHPAPTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEALVKDLTAGEGFRCYESSLGGPGV 647
            +N WA+  E V+HG PSG+DNTVS  GGA+ F KG        EP+ GF  L  LLTNT VP+ T+  VA VR L +  P     + DAI  +++           ++ G          GEL ++N  LL ALGV HP+LE+V  +    G KSKLTGAGGGGCALT++  D++    A+VK L   EGF+C E+S+GGPG 
Sbjct:  175 VNQWAFQAEKVIHGNPSGIDNTVSTLGGAVMFKKG-----EKIEPLPGFQSLRFLLTNTRVPRETQVQVANVRKLHDKFPTVVNPMLDAINEISNSCKN-----IFSQDGLDRAHLLARFGELVDVNHGLLAALGVSHPSLEKVREISSKLGLKSKLTGAGGGGCALTLIRDDVTSETVAVVKQLLEAEGFQCMETSVGGPGA 367
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: A0A5E4C6P9_MARMO (Uncharacterized protein n=1 Tax=Marmota monax TaxID=9995 RepID=A0A5E4C6P9_MARMO)

HSP 1 Score: 155 bits (392), Expect = 7.760e-40
Identity = 101/232 (43.53%), Postives = 129/232 (55.60%), Query Frame = 3 
Query:   12 RPSVTELEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHP---APTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEALVKDLTAGEGFRCYESSLGGPGVLYHDGGMSPNALLQGDG 698
            R S  +L+ IN WA+ GE V+HG PSG+DN VS +GGA+R+ +G          +   P L ILLTNT VP++T+ALVAGVR      P    P     DAI A  +  L   A+A A E      L  E   EL +MNQ  L ALGVGH +L+++C V   +G  SKLTGAGGGGC +T+L  D+   K    K   A  GF C+E+S+G PGV  H        + QG G
Sbjct:   10 RWSEEDLQLINKWAFQGERVIHGNPSGVDNAVSTWGGALRYQQGK------ISSLDRTPALQILLTNTKVPRSTKALVAGVRNRLIKFPDIVEPLLTSVDAISAECEHVLGEMASAPAPE----HYLVLE---ELIDMNQHHLNALGVGHASLDQLCRVTAAHGLHSKLTGAGGGGCGITLLRPDLEQDKVEATKQALAACGFDCWETSIGAPGVSMHSATSLEGHVHQGLG 228
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: A0A671FLS0_RHIFE (Mevalonate kinase n=4 Tax=Rhinolophus TaxID=49442 RepID=A0A671FLS0_RHIFE)

HSP 1 Score: 159 bits (401), Expect = 2.720e-39
Identity = 96/221 (43.44%), Postives = 130/221 (58.82%), Query Frame = 3 
Query:   27 ELEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHPAPTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEALVKDLTAGEGFRCYESSLGGPGVLYHDGGMSPNALLQ 689
            +LE IN WA+ GE V+HG+PSG+DN VS +GGA+R+ +G     ++  P    P L ILLTNT +P++T+ LVA VR      P   A +  +I A++ E  ER     AA  G    L  E   EL +MNQ  L ALGVGH +L+R+C V + +G  SKLTGAGGGGC +T+L  D+ G +    K     +GF C+E+S+G PGV  H       A+ Q
Sbjct:  181 DLELINKWAFQGERVIHGSPSGVDNAVSTWGGALRYQQGK--ISSLKRP----PALKILLTNTKIPRSTKTLVASVRSRLLKFPGIVAPLLTSIDAISVE-CERVLGEMAAAPGPEHYLVLE---ELIDMNQHHLNALGVGHASLDRLCQVARAHGLHSKLTGAGGGGCGITLLRPDLEGPEVEATKQELTRDGFDCWETSIGAPGVSVHSAASVDAAVRQ 391
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: A0A2F0AYD5_ESCRO (Mevalonate kinase (Fragment) n=1 Tax=Eschrichtius robustus TaxID=9764 RepID=A0A2F0AYD5_ESCRO)

HSP 1 Score: 153 bits (387), Expect = 3.200e-39
Identity = 97/212 (45.75%), Postives = 122/212 (57.55%), Query Frame = 3 
Query:   30 LEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHP---APTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEALVKDLTAGEGFRCYESSLGGPGVLYH 656
            LE IN WA+ GE V+HG PSG+DN VS +GGA+R+ +G     ++  P    P L ILL NT VP++T+ALVAGVR      P   AP     DAI    +  L   A A A E      L  E   EL +MNQ  L ALGVGH +L+R+C V   +G  SKLTGAGGGGC +T+L  D+   +   VK      GF C+E+S+G PGV  H
Sbjct:    9 LELINKWAFQGERVIHGNPSGVDNAVSTWGGALRYQQGK--ISSLKRP----PALKILLINTKVPRSTKALVAGVRSRLLKFPEIVAPLLTSIDAISLECERVLGEMAAAPAPE----HYLVLE---ELIDMNQHHLNALGVGHASLDRLCQVTMAHGLHSKLTGAGGGGCGITLLRPDLERPEVEAVKQALTSCGFDCWETSIGAPGVSVH 207
[Close]
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Match: G5BDR4_HETGA (Mevalonate kinase n=6 Tax=Bathyergidae TaxID=10167 RepID=G5BDR4_HETGA)

HSP 1 Score: 157 bits (398), Expect = 7.070e-39
Identity = 96/213 (45.07%), Postives = 125/213 (58.69%), Query Frame = 3 
Query:   27 ELEEINAWAYAGETVLHGTPSGLDNTVSCYGGAIRFMKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHP---APTAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLCALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEALVKDLTAGEGFRCYESSLGGPGVLYH 656
            +LE IN WA+ GE V+HG PSG+DN +S +GGA+R+ +G     ++  P    P L ILLTNT VP++T+ALVAGVR      P   +P     DAI    +  L   A A A E      L  E   EL +MNQ LL ALGVGH +L+++C V   +G  SKLTGAGGGGC +T+L  D+   +    K    G GF C+E+S+G PGV  H
Sbjct:  181 DLELINQWAFRGERVIHGNPSGVDNAISTWGGALRYQQGK--ISSLNSP----PALQILLTNTKVPRSTKALVAGVRNRLIKFPEIVSPVLTSIDAISRECERVLGEMAAAPALE----QYLILE---ELIDMNQYLLNALGVGHTSLDQLCQVAGAHGLHSKLTGAGGGGCGITLLRPDLERAEVEAAKQALTGCGFNCWETSVGAPGVSIH 380
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2958.8041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUV7_ECTSI1.250e-8768.07Mevalonate kinase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z5H2_9STRA3.280e-4850.22Mevalonate kinase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4B5A5_CHRCT2.140e-4746.61Mevalonate kinase n=1 Tax=Chrysotila carterae TaxI... [more]
R1EVA3_EMIHU8.860e-4245.70Mevalonate kinase n=2 Tax=Emiliania huxleyi TaxID=... [more]
UPI001E1D85FC5.380e-4042.36mevalonate kinase n=1 Tax=Echinops telfairi TaxID=... [more]
A0A197K0J9_9FUNG5.890e-4044.33Mevalonate kinase n=1 Tax=Linnemannia elongata AG-... [more]
A0A5E4C6P9_MARMO7.760e-4043.53Uncharacterized protein n=1 Tax=Marmota monax TaxI... [more]
A0A671FLS0_RHIFE2.720e-3943.44Mevalonate kinase n=4 Tax=Rhinolophus TaxID=49442 ... [more]
A0A2F0AYD5_ESCRO3.200e-3945.75Mevalonate kinase (Fragment) n=1 Tax=Eschrichtius ... [more]
G5BDR4_HETGA7.070e-3945.07Mevalonate kinase n=6 Tax=Bathyergidae TaxID=10167... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2958contigH-paniculata_contig2958:852..11066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score215.7
Seed ortholog evalue2.6e-53
Seed eggNOG ortholog2880.D7FUV7
Preferred nameMK
KEGG rclassRC00002,RC00017
KEGG koko:K00869
KEGG ReactionR02245
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004496,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019287,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0046872,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901615
EggNOG free text desc.mevalonate kinase activity
EggNOG OGsCOG1577@1,KOG1511@2759
EC2.7.1.36
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons3
Model size1910
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2958.8041.1prot_H-paniculata_contig2958.8041.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2958 1839..10932 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929902.9120986-UTR-H-paniculata_contig2958:851..18381622929902.9120986-UTR-H-paniculata_contig2958:851..1838Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2958 852..1838 -
1691481062.3375998-UTR-H-paniculata_contig2958:851..18381691481062.3375998-UTR-H-paniculata_contig2958:851..1838Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2958 852..1838 -
1622929902.9961648-UTR-H-paniculata_contig2958:10932..110661622929902.9961648-UTR-H-paniculata_contig2958:10932..11066Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2958 10933..11066 -
1691481062.384636-UTR-H-paniculata_contig2958:10932..110661691481062.384636-UTR-H-paniculata_contig2958:10932..11066Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2958 10933..11066 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929902.9350598-CDS-H-paniculata_contig2958:1838..22421622929902.9350598-CDS-H-paniculata_contig2958:1838..2242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2958 1839..2242 -
1691481062.3530056-CDS-H-paniculata_contig2958:1838..22421691481062.3530056-CDS-H-paniculata_contig2958:1838..2242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2958 1839..2242 -
1622929902.9579723-CDS-H-paniculata_contig2958:9007..93561622929902.9579723-CDS-H-paniculata_contig2958:9007..9356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2958 9008..9356 -
1691481062.3614838-CDS-H-paniculata_contig2958:9007..93561691481062.3614838-CDS-H-paniculata_contig2958:9007..9356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2958 9008..9356 -
1622929902.9774766-CDS-H-paniculata_contig2958:10896..109321622929902.9774766-CDS-H-paniculata_contig2958:10896..10932Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2958 10897..10932 -
1691481062.3746865-CDS-H-paniculata_contig2958:10896..109321691481062.3746865-CDS-H-paniculata_contig2958:10896..10932Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2958 10897..10932 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2958.8041.1

>prot_H-paniculata_contig2958.8041.1 ID=prot_H-paniculata_contig2958.8041.1|Name=mRNA_H-paniculata_contig2958.8041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MKGMGGAGNVTEPIAGFPPLPILLTNTLVPKNTRALVAGVRCLREAHPAP
TAAVFDAIGAVADEFLERAATATAAEGGAGTGLTAEAVGELAEMNQQLLC
ALGVGHPALERVCIVGKTYGCKSKLTGAGGGGCALTILGADISGRKEALV
KDLTAGEGFRCYESSLGGPGVLYHDGGMSPNALLQGDGGGSVDAGGGVDG
GGGGDGGQQEKERRWEGGRESRAGITATTSVVVAVAAVVAAAAIVAMAFG
QRQSSRGRGYYF*
back to top

mRNA from alignment at H-paniculata_contig2958:852..11066-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2958.8041.1 ID=mRNA_H-paniculata_contig2958.8041.1|Name=mRNA_H-paniculata_contig2958.8041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10215bp|location=Sequence derived from alignment at H-paniculata_contig2958:852..11066- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGAGGGGCGAAGACCCAGTGTTACTGAGTTGGAGGAGATTAACGCGTGG
GCGTATGCTGGGGAGACTGTGTTGCACGGGACCCCGTCTGGGCTGGACAA
TACGGTCAGCTGTTACGGCGGGGCGATTAGGTTCATGAAGGGCATGGGGG
GTGCGGGAAATGTCACAGAGGTGAGTGGGGGGAAAACGGGGTGAGGGAGC
GCGTGACATAGGGGTGTGGCATGAAAATTATAGGTTTTGTTTGGGCAATG
ATTTGATCATGATCAAGTTATTTGATTCGGTTACTATTTCAACCGGAACT
TCGAAGCAGTGCTATTGTATGTGAGATCATAATCGAAATGCAGTCGTTTT
GCTTTTTTTTCGTAGTGGAGTGTCTGTATTGTCTGTCTGTCTGTCTCTCT
CTCTCTTTGCTGTCCTTTCTGTCTGAATACAATCACCGCGATTTCTTTTA
ATTCCTTTTTCAACGTCACTTACGATCAGAATTGGCGATAAAAAAGGATT
CCCGACCGACGATTCTGTCCGCGTAATAGTCGGTGTTGGACATGATGCTT
GAAAAATAAAAACTACGCTTGCCTCCAGTCCTGACCGAGGTTTCTGGGAC
TAGGCACGATATTTGACTGACTAGTAACAAGTGCGCACATCTGATGCGGT
GGTGAATGAAAACAAGGCGCGCGACAACGAGTTTTCGATATTTGAAAAAT
ATTATGGGTTTGTGAACTGAGGGTACCACAGTACTACCACGGCCTGTCTC
CGTAGATGAGGGCTTTCCAAAGTTGTTCGTCACAGGGATCTGCAGAAGTT
GATTAGGACAGACGCCGAATATCATATTCGTATTTTCGTCGGAGGCATGG
TTCTGCGCACGATAATTGCAGCCCTCGACATCTGTTTCACTATTTATTTT
TGTTGCGGAACATGAACTTGAAAAAATTGAGAGCTAGTTCGCTGTTAGTT
GTTTTTTTTCCTTGATCGGTTCGAGCATGTGTATGCACAATAATGAAAGG
AAATGTAGAAATACTTTGGTAAAGTACTTGAGTATCGAAGCATCGGTAAA
GGTTTTTGCCTCAGCCTTCCGCGGGTGTAAAAAAAAAAAAAAAGCACAAT
AATTAAAGGTTCTATTGAAGTGAAACGGCAGCGTTGTTCTTTAGTGATTG
TTCTGTTGCAGAGAAAAACGATCTATTTCCTATTTGTCAACAACATAGGC
TGCCGATATTTCAGGGGTATTCCTGTTCCAAACCTGGTTCTAGCCCCGCT
TTCCTCGTGATTGGTTCAACTTGAGAGTAAAATATAAAATGGAGGGCTTT
CGTAAAATCAGAAATGGCTCCTACATGCGTCCCTCTTCTGTAGGTTGTTT
CTTGTGCTGATGGGGAGAAGCTTTGATGTCCAACCTTGACAGCGTCACCA
CAACAAGTATTATACCGCACCACCATACAGTGAATTTGCATAGAAATGAA
CAGCGGCGGAGATATCGAAATTACATTTGTCTGTTCTTCTCACAACAGCA
CAAAATTATCCGGACGGCTACGTGCTTTGCTATCCCTTCCCCCCCGGACT
CCGTCATCTCGAGCACACGTGGTCAACGGTCTAACAGCTATGGCATGCAC
AACATGAGGATCCCCCTTGTTGATTTAGTCTTGCTGGTAAATATGTAAAC
AATTGCAGATTAATATCCCCCCCCCCCCCTCCCAACCCCCATTTGTGTTC
CACCCCTCAGCCCATCGCCGGCTTTCCCCCCTTGCCTATTCTCCTCACAA
ATACCCTGGTGCCGAAAAACACACGAGCGCTCGTCGCCGGCGTGCGCTGC
CTCCGAGAGGCTCATCCGGCCCCGACAGCCGCTGTGTTCGATGCCATCGG
GGCAGTCGCCGATGAGTTTTTAGAGCGAGCGGCGACCGCAACGGCTGCGG
AGGGCGGGGCGGGAACGGGTTTGACTGCGGAAGCGGTCGGGGAGCTTGCG
GAGATGAACCAACAACTCTTGTGTGCTTTGGGGGTGGGGCACCCGGCGCT
GGAGCGGGTGTGCATTGTCGGGAAGACGTACGGCTGCAAGAGCAAATTGA
CTGGGGCAGGTGGGTGGATTGGGTGGGTGGGTTTGTGCGGGGCTCGGTGG
TGATGACGATGGTGGTGATGGTGGCGGTGTGTGAGTGCTGTCTGATTTCG
ATGTTGATACCTTCGTTTCGAGTGTTGGAGCCTTTGGCGAGGTGGCTGCT
TCAGGTAATGTTTTTTTTTTTTTTTGCAAAGATTGCCCAAGGCATGAAGG
CAACATTTCTATCACAGGCTGTTGAACTGTCAATTCTGGAACTAATATCC
CCACGGACGGAGACAAAAATTTCCAAAGATGGACGATTAGATCTATCTTA
AAAGAGTACTTGGCCTGTCTGTGCTTGCGGTGCTGCTAAGGAGAAAATGA
GCACTGTGGCACAATCGTGAATATTTAGGCCGAAAGTCTGTCCACTAGGT
GTTCCAACAGTACACGGAGGAGCACTGTGATGACGGTCATGAGGTGCTCC
ATGGGTATCTGCATGTTGTCTCTCAGTGTCCTCGAGCTCCTCCGCTGCCA
CGACATGAACCAGCTCAGCTTAAAAGCCGTTTACAGTAGCGAAGGAGACA
TCGATCGCACCATGTCGTGCGAAAGAATCGACTATTGTAGCAGTGTCGAT
CGTTGGTATATTCATACATACCCTTGGTGACCGTGGTGACATTGCTATTT
AGTGGAGTCTGGAGTCTCGTCATATCTCGCACCTGTCGCTTGCAGCTCAT
ACTGTGGATCTTGTGGCGGTCGTGTGTTGAATATTTTGCTGACTGCGGTT
ATCGAGGGATTTAGCTCTGTGTGAGAGATGTTGCTGAGATAACGAGTACT
GACACACGGCAAAAAAATCAGGCAGATTCGTGCTGAGCGACAGTGGCGCA
GCGTGGAAAGCTTCCTTGGCGTTTCCCTAAAGGTTAAAGACTGGAGGTTT
ACACGTGCGAGGCAGCGAATATCCTCATAACGTAGTTTGAATGTTTTTTT
AGTCACCAGATACCCTGATAAGATGTCTCAAACGGTGGATACGAGATCTC
ATGCGGGGGTGATACCGTAAAAAAATCTAACGCTGCAAGTGGGTACGGCA
ATCCTTACGACAATTGAAGAATATACGGAAACTTTACCGCTTACGATAGA
CGTTCATTGGTGTGCTGATGCGTTGAACGCATGCGAAACGATCGTCGGTC
ACGGGATCTTATGCCCTATATACCAATCGGTACGATACTCGATGGCGTTG
CAACAGGTTGCGAAACAGATTGTTGTATCCATGCTTGTGTTGCAACCAGA
ATAAGCATAATCAATATTTTCGGTTCCACAGAATAACCTGAGTATGGCGA
ACGTTTGTATTTATGAACATTGAAATTCTTGTACAAATTAACAGACAAGT
AAAGCTATTTCTTGAGGTTTTGGTGACATGTTGCAGTCACGATTTTTGTT
AAGATCCCCCCCCCCTCCTCCCTCCTCTCCTTTACACGGTGAGAGTTGAA
TTCAAGAGAATTTGCCACCGGGATGGACGGTAGTATTTGACGCAAGGAGG
AGTTAGAAGAGAGAATACACACTTGAAAGTAATTTTCTGCAAGGGAGACA
GCAGTAGATTTCTGCCGGTTTACATTGAGAGGGTAGCGGAGTACTCGAGG
ATAAATGAATGGGGAGTGTGCATAGTGACGTAAGTATATTGGAGAATGGG
AAGGAGATAAGCCACGAGGGAGAGAGCAAGTAGCATGGAGTAAAGCAGAC
GAACATGCAGATTGGGATCGTAAAGGAGAAACGACGGCACAAGGAGATGC
AGCGTTAGGCCAGCCCAATGGGGAATGCAGTGGGGAGAAGGGATTTTGAA
AGTAGGGTCGTGGAACATGAATGGGTTTGCGGAAAAATGAGCTCAAGCAG
CTAGAAATAATGGAATATGTAGAGCAGTGTGACCTCGATGTGGTGAGGAT
TCAGGAGACATGGGTGCAGAAAATAGGGAAGTTGATACTGAGATGGAGAG
GGGCTGCTCGATATGATTGGCGCGGAAGGGTCGAAACCACGAGCAGAAGG
GGGCGGGAGGAGTGGGATTTTTTTATCGAGATTCGCATTTTTTTATATTT
TCCAACTTGTGATGAAGACTTAGTTCGAGTAGAGCATTTGGCTGCAGATC
CCGAGAGAAGGGGGGCGAAAAGGGTATATTCCTAGGAAAGGCCGACGTAG
CGTCGTCCTCGAAGCATTATATTAACGAAGCGGAAGAGATCTTTGAATCT
AACCCTATGAACAAGGGGGAAGCTGTCGTAGTGGGAGATCTGACCACGAT
AGGCGAGCAGTCGGGCGGTACGGAGAAGAGATCGTTGGTGAAAACGAAAA
TAGGATGATGGCATTCTTGGATGGTGAAAGAGGGTAGGAGATACCTCAGT
AACACCAACCCAGAAAAGATTCTCCATTGTTGACTGTATCCTGATTGACA
GAGAGAGTAAGGAATTAAACACTCTTTACGTGTATCCATTTGATGTAAGG
ACAACACATCATAGCATAATATGGCCAGCTATCAGCATGGATTGTACAGG
AGAACGATAGAGTAGGAGAATATTAATTAGCTGGAGAGTAGAGCGGCCAA
ACAAAGGAGGGAAAGTGTGAGATATTTTTCAAAGGAGATGGTCGAGAGAG
AATTAAACGGTCCGGGTAGTGTTGTTGTAGATGGTGGAAGCGTGGGAGGG
GGGTCGCGTCGTTTGGATTGACGCCTTGAACAAGAAATACCGGAGATAGA
AAAAGCTAGCTCTGTTGATTTGAAATAAATTTCGAGATATCGTGCGTGTG
TACCATGTACCGTGTAGAAGAGGTGTTGGGTGTTTATACTTGCGTTATAG
AAGTTAATCAGGAAAGAAGTAAAATTGGCGAGTAGCAGGAATCGGGATGA
TAGGAAACGTCGGCAGAGCGTGGTTACTGTAGGGACTGAGAAAGTAAAAT
TGATGAGAATGTACTTATGTGGGGGGTGTATACTACTTAAGAGGGACTGC
AGAAACAGTTTGACGAAACGGTGGAATTTGGCAGCGAGTGGAGACCAAGC
AAATGTCAAGGAAGTGTGCCGTGATGGTGTGCAACGATAGTAACGTAGAG
AAAGTAGACTTGAAGTGGAAATGGGTAAACGAGAAGCTACGAAGGGTGGA
TCAGTACAAATATCTCGGTGTTGGATTCCCGAAAGAGTGTAGGTGAGATG
CACACTCGGAAAGAGTAACCTATAAGAGAAAGCCCGAATAAAGAAAAGTC
GACCGATACTAGCCTACCGGCATCTTGACACGCATCATGTTCTTTTGTGA
AGTGTCCCTACTCCACCGTTAAAATAAGCAGACGTGTATGAAGGGAACCA
GAAAACAGCCGAGGAGTTGGATGTGGTGTAGACGCCAGTAGCAGACGTGA
TATTAGAAGGTTCGGAGTGCGCCAGCATTGCAGCAGTAGGGGAACCGTTG
GGCATACGCTCGTTGGGCATACGCTCCTTGAAATTGGGAAAATACGCGAG
AAAGCTGAAGTCGCAGGCAGTACCGACTGCAGAACAGGAGACTGGCAAAA
ATTGCAAGAAAAATGTAGTAAAAGATTCTCACTCGAAAGAGCGTAAGACT
CACGGACTGGGTTTCACCGTAGTGGAGGAAGTGTGGAAACAAGTGGAAAT
TTCCAAGGAGGAAACGCTGAAGAGTAAAAAAAAGGACCGAGTTTTGAGGA
GGAACTTGAGGGTGCGATTACAGCCAGGAAGAACAAGAGCTGAAAAGAGT
AGCTGCGAGTAAGGAATGTCTGGAAGTCCACCAAGACTGGGTGAAGGAAT
AGAGTTGAAGGAATACTTACATTGACCATTAGACGCAGGTACGAAAAAGT
TGAAAGTCAAAATTTCGGACGGGTGATATCGACCTTATGGAACTTGGGGA
AATGATTCGAGGAACTAGACAAAGGTGGCGATACGATGTTGAAGTGTGAC
TGCGGTCGTGCGTGTGAAGACCGAATTCACATGATGGGAGAATGTACCCC
TTCTATGAGAAATATTAATAAAAATTGTGTGAGTGAAATAAATTAGGAAA
AATGGAAGAATGCGATTGAGGAGTCTTTTAATCCCGGAATTGCGAAAATA
AGATGGCACTTTTAGGGAAATGTAAATCGAATTGAAAAGCGAGGCTTGGG
GCAGATAGGATAGGACATATTGGTAAAATTGAGGGTAGGGGGTTTCAGTT
GTTGGAGGCTCCCACACGCATTTTCGATTCTATCCCCAACTGTACACCGT
ACAGTTGTACACATAGGATACAAGAGCAAGAGAATACACATCCCTTCAGT
CTTAGCTTGCCTCTGACTTTTTGTATGGGTAAAGATTAGTTGCAAGGTTG
CTGCATGCAGTAGGGCGCGCAGCCAAGTATGCTGACTGTGAGTCACGTCC
TTGTCCCGCTCTATTAGTAAAGGTAATTACCCTCCTGCCCTCGTTGTTGG
AGACTTTTGAAAAATAGCAGGTGCTGACCTCGCGGTTCACGCATAATTCC
TTGTCAATTCATGAAGGTGCGTAACAGAAGTGACCCGATAGACAACTGCA
TATAATAATTCAGACGCAATAAAGTAGAGGCGCCTGGCATTATTTTACGT
TGTGCCCGTCCGGACATGTCCCGGGCATGCTATGGCCGGGATATGGCCGC
GCCCGGCCAACACAGGCCCATGTCCTGGCCATGGCAAGGAGAGTCATACT
GCGCTCCCATGAAAGTAGTGTACGATGTACCGTATCTCGTGGCAGTAAAA
CGTCAAGTAGGTCTCATGGCTTGTGTTGGTGAGGAGTAGGTTCGCCATGG
TATGTCGAAAGCCCCCTAACGGTAGTAGCGTTTATTCCGTGGCAGATAAC
GCATGGCAGAGCTAAGATAAACAAGCCCGGCAAGCATGTCGCCGGACGAC
GCTTGCGCTGTTGCGATTGTGTAACACTTTTACCACGCTTAAACGTGTGG
GTTTGCTTTTGGTGTATATTTTGTTCGATTCGTGGAGTGGTGTCCGATGG
ATACATGGACGGTTATGACGGTCAGAGTTAGGTTACATTCATAGCTTTGG
AACGCGGGTTTATCTTCAAAACAAAAGATTAACAATGATCCTGGTGGATA
ACTCTGGATCCCAGTCTAGTACACAAAAAAGACACAAGTCGTCGCCGCCG
GTACACCGGGTGCACCATTCCGCTGTCCGCCACCCCTTGCCTGACGGGGG
CAGACTGGTAAGCACAGTCATCGTTCATACCTCTCTCGCCCCGGGCCGCC
CCAGCTCCACCTGACCTCCACATTTGAGCCGACGCAGGCACCCGCACTAC
TAACCGTATAACCCTATTAAATTGCGGTTCAAGGCGGACCCTTTCATTCT
CGTTGTGGAGCGGTAGTATTAATGTTTTTCCTGGATAAGTACTTGGGAGT
TGGCAGCGTCGGACTCGAACTGTACCGCCCCGTAACTACAGGCGTCTGAC
GGAAGTGTCATAACCGCCCGTTGGAAACATATGGAGTCCCATGGCCGGGA
CGTGGCCGGGAACATGTCCGCACCGATACACTGTTAAAAATGGAATTTAG
TCGCATTTGGGTGTGGGCGAGTGTGGATGACTATTGTTGATAGTTTCATC
CTGTGCCAGCGCCTCACCCTCGAAAGGTGTTGCGGTTCCATGTGATACCT
ATACAGGGTAAACCCTGGCAGGATGCAAAGCTGGGAGTTGTTGGGGTGTC
TTGCTGCTGTATGTCTACTGGACAAGAGGTACGGCAATCCGGCATGACGT
GTCGTCCTGCAACTTGTTTAACCGTTCGAGGATTGCCTGCATAATTGATC
TTAAGCCCATAACTATAACCATGCCAAAATTACCTGTGAAAAGCTTATTC
GAAAATGATTCATGTTCCTTCTGTTGCGTCTTTCAAGTAACATACTCCTT
TTGCTCCTCTTACGGTGGCACAGGATCCACCTTCGAATTATACTGAATCT
TATAACGAGGAATTGGATTTGATTCTGAACTGCCGCTTCATATCCTTCCA
GAAATCTCGGAGTATCGAGATCCTGCTTTCTAAATAACCGAGCAGCTTCA
CAAGTCCTAAGCGGTTGAAACGGTGTGTTTCGATTAAACCGCGAAAGCCT
TCCCAGTCGGAATTGATCGAAGGTCGTGAAAGTACTCTCAATTGATTCAG
CTGTCTATGCTGTCTATACAAAGAAGAGTCAACCTGCAAAAAATATAATT
CATCTTCAAAAAGTCGATCGAACAAACAGCAGAATAGCGAACGACAGACC
GGTCGCGCCAGTCAGCGATCACCCCTCACACACAAACAGCCCACTACGCG
GTCCTACAGCAATGCACACTTCAAAGCCCTGCCCTACGAGCGACGCGTAG
TAGCCTAGCACCAGGTAGATTGGCTTGCCCATATGATGCACACATGCTAC
ATGCATAATTTTCTGTGTACTGTAGTTCATTGTAAGTCATTTCGCTATGA
GCCAACTCTGACTAGAATTCTGATGCGAAATGCATAGATTGACCTTGATC
TTACCGAGGGTGGCCACGTCGAAACGACTATCCTTGCCCTTAAAATCGCC
AAGTACCCCCCCAATCTCAATTTCACTCCACCGTAACCTTTTTGAGCCAC
ATTTGGCTTCGTAGAAATCATGAGTCATCGGAGATTGCTCTGATACAAAG
TTCCGTCCTCCTGAGGACGCCCGGCCAATAGTTTAACAAAGATGGCATGA
AAAAAATGGTGATAAAGTATACACGACTTAACTCAAGTTTGAGATTGACT
GAATAACCTCAGCACGGGTACAATCTCCCTCTCTCTGCTACTGCGTATGC
TCGCCCTCTTCCACGTTGTCACAGGCGGAGGTGGCTGCGCTCTCACAATC
CTGGGAGCTGATATTTCTGGCCGTAAGGAGGCCCTTGTGAAAGACTTAAC
CGCCGGAGAGGGATTCCGGTGCTACGAGAGTTCGTTAGGGGGACCCGGAG
TTTTGTATCACGATGGAGGCATGTCTCCGAACGCATTACTTCAGGGGGAT
GGTGGTGGTAGCGTCGACGCCGGTGGTGGCGTTGACGGCGGCGGCGGCGG
CGACGGGGGGCAACAAGAGAAGGAGCGGCGGTGGGAAGGGGGCCGGGAGT
CGAGGGCAGGGATTACTGCTACTACCAGTGTGGTTGTGGCTGTGGCTGCT
GTGGTTGCTGCCGCGGCCATTGTCGCGATGGCGTTTGGGCAGCGACAGTC
ATCACGAGGTCGAGGTTACTATTTTTAGAGAGTGCTGTTATTGTGTATGT
CGTCATTCTTGCTTTTGGTGATTTCAGGTTTATTTTGGATTTTATTGATT
CGCGTACAGTACGCTTTGCGATACGTTTCCATTATCATGAAATTCCCTAT
TAATGAACCGTTTGGTCCTCTGGGCGAAGATGGTTGAACGAGGGAAAGAG
AGGCTAACGTACTGGCGCCCTCTGGTCTTATTGCAGCTGTTCAAACTGTT
ATACACTGCTTCACGTGGTGGCAGAGATATCGATACACGGCAGCTGCCTT
TTGGTACTGTAATGACGGACAGGAAGAGAATAGCAACCTCTGGCCGGGTG
AAGTCACAGTTCGGGCATAATGCGTCAATTACACAATGATTCCAAGTTCC
CCCGAATTAGAAGCGATTATTTATAGTTAGCAGGCGTATTTGGACATTTG
CACTCCACCGAGTGTCCTGTTTAAATTCCTTGTTATGTACGTGAAGGCTT
GTCGGTGTAGCCGCAATTAACGTTGCGTGTTCTTCGTATGGAGATGGCAC
TGCTGGCAGACTGTAATCCACACTGTAGTTACAAGTAACCACTCCCCCCA
CACATACTTGTGTACCGCCTGTTGCTGGGTGTGTAATGATTTGCGAGGTG
TGGTAGAAGAGATTGGTCCGGATTAAACAGAACGCAGCAGATTTAGTTTG
CAGCGATGGATGAAATAGACAGTACACTTTCTGTAGTGTAGCACCGTCTT
TATGTACTGTTTTTTTTGCGGTTACGGTAGAAGGTTGAACAGAGACGGAT
ATACATTGGCTCGTACCAGCATCACCCTAGAGAGCAGCGAGTGTGTGGTG
TGCTGCAGTGTATGATGGTACGTAGGAAACGCAGCAGCTGGTCAAGTTAT
GATAGTCAAATTATGGCGCTACCAACACTATTATTTTTGTTTTGTGGGGT
TCATCGTGATATCCCCGCTATCGTTGAACAAGGTTATGTCGTTTCTGTAA
TAAAACAAATCTTCG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2958:852..11066-

>mRNA_H-paniculata_contig2958.8041.1 ID=mRNA_H-paniculata_contig2958.8041.1|Name=mRNA_H-paniculata_contig2958.8041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig2958:852..11066- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGGCATGGGGGGTGCGGGAAATGTCACAGAGATGAAGGGCATGGG
GGGTGCGGGAAATGTCACAGAGCCCATCGCCGGCTTTCCCCCCTTGCCTA
TTCTCCTCACAAATACCCTGGTGCCGAAAAACACACGAGCGCTCGTCGCC
GGCGTGCGCTGCCTCCGAGAGGCTCATCCGGCCCCGACAGCCGCTGTGTT
CGATGCCATCGGGGCAGTCGCCGATGAGTTTTTAGAGCGAGCGGCGACCG
CAACGGCTGCGGAGGGCGGGGCGGGAACGGGTTTGACTGCGGAAGCGGTC
GGGGAGCTTGCGGAGATGAACCAACAACTCTTGTGTGCTTTGGGGGTGGG
GCACCCGGCGCTGGAGCGGGTGTGCATTGTCGGGAAGACGTACGGCTGCA
AGAGCAAATTGACTGGGGCAGCCCATCGCCGGCTTTCCCCCCTTGCCTAT
TCTCCTCACAAATACCCTGGTGCCGAAAAACACACGAGCGCTCGTCGCCG
GCGTGCGCTGCCTCCGAGAGGCTCATCCGGCCCCGACAGCCGCTGTGTTC
GATGCCATCGGGGCAGTCGCCGATGAGTTTTTAGAGCGAGCGGCGACCGC
AACGGCTGCGGAGGGCGGGGCGGGAACGGGTTTGACTGCGGAAGCGGTCG
GGGAGCTTGCGGAGATGAACCAACAACTCTTGTGTGCTTTGGGGGTGGGG
CACCCGGCGCTGGAGCGGGTGTGCATTGTCGGGAAGACGTACGGCTGCAA
GAGCAAATTGACTGGGGCAGGCGGAGGTGGCTGCGCTCTCACAATCCTGG
GAGCTGATATTTCTGGCCGTAAGGAGGCCCTTGTGAAAGACTTAACCGCC
GGAGAGGGATTCCGGTGCTACGAGAGTTCGTTAGGGGGACCCGGAGTTTT
GTATCACGATGGAGGCATGTCTCCGAACGCATTACTTCAGGGGGATGGTG
GTGGTAGCGTCGACGCCGGTGGTGGCGTTGACGGCGGCGGCGGCGGCGAC
GGGGGGCAACAAGAGAAGGAGCGGCGGTGGGAAGGGGGCCGGGAGTCGAG
GGCAGGGATTACTGCTACTACCAGTGTGGTTGTGGCTGTGGCTGCTGTGG
TTGCTGCCGCGGCCATTGTCGCGATGGCGTTTGGGCAGCGACAGTCATCA
CGAGGTCGAGGTTACTATTTTTAGGCGGAGGTGGCTGCGCTCTCACAATC
CTGGGAGCTGATATTTCTGGCCGTAAGGAGGCCCTTGTGAAAGACTTAAC
CGCCGGAGAGGGATTCCGGTGCTACGAGAGTTCGTTAGGGGGACCCGGAG
TTTTGTATCACGATGGAGGCATGTCTCCGAACGCATTACTTCAGGGGGAT
GGTGGTGGTAGCGTCGACGCCGGTGGTGGCGTTGACGGCGGCGGCGGCGG
CGACGGGGGGCAACAAGAGAAGGAGCGGCGGTGGGAAGGGGGCCGGGAGT
CGAGGGCAGGGATTACTGCTACTACCAGTGTGGTTGTGGCTGTGGCTGCT
GTGGTTGCTGCCGCGGCCATTGTCGCGATGGCGTTTGGGCAGCGACAGTC
ATCACGAGGTCGAGGTTACTATTTTTAG
back to top