prot_H-paniculata_contig29543.8036.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29543.8036.1
Unique Nameprot_H-paniculata_contig29543.8036.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
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BLAST of mRNA_H-paniculata_contig29543.8036.1 vs. uniprot
Match: A0A6H5L0Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y9_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.880e-11
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 0 
Query:    2 VFRRGIEDCASEDVSFLYHSMGSMELASGRLQDAKAVFAEGLRWYPKNTQLLLGAALAETK 62
            +F RGI + +SEDVSFL HS+GS+ELA+ RL +A+AVF  G+  YP  +QLLLGA LA  K
Sbjct:  728 IFARGIRE-SSEDVSFLCHSLGSLELAADRLGEARAVFLAGVERYPNGSQLLLGAGLAIAK 787
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BLAST of mRNA_H-paniculata_contig29543.8036.1 vs. uniprot
Match: A0A1X6PKZ8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKZ8_PORUM)

HSP 1 Score: 57.8 bits (138), Expect = 3.060e-7
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0 
Query:   10 CASEDVSFLYHSMGSMELAS----GRLQDAKAVFAEGLRWYPKNTQLLLGAALAETKSS 64
            C  ED S+++HS G +EL +    G    A AVFA+GLR YP+N+QLL+GAALA   S+
Sbjct:  644 CTREDTSYVWHSWGMLELHALGEGGGASAATAVFADGLRRYPRNSQLLVGAALAAVASA 702
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29543.8036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0Y9_9PHAE3.880e-1159.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X6PKZ8_PORUM3.060e-750.85Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 30..62
e-value: 920.0
score: 1.0
coord: 98..122
e-value: 360.0
score: 4.0
coord: 64..96
e-value: 0.035
score: 23.2
NoneNo IPR availablePFAMPF14559TPR_19coord: 27..88
e-value: 4.9E-7
score: 30.1
NoneNo IPR availablePANTHERPTHR44917FAMILY NOT NAMEDcoord: 2..122
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..122
e-value: 3.2E-23
score: 84.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..121
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 16..117
score: 17.278
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 84..117
score: 5.723
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 50..83
score: 8.526
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 16..49
score: 7.464

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29543contigH-paniculata_contig29543:609..1517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29543.8036.1mRNA_H-paniculata_contig29543.8036.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29543 609..1517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29543.8036.1 ID=prot_H-paniculata_contig29543.8036.1|Name=mRNA_H-paniculata_contig29543.8036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
KVFRRGIEDCASEDVSFLYHSMGSMELASGRLQDAKAVFAEGLRWYPKNT
QLLLGAALAETKSSNIERARELFRRSIQADPTHAHAWQAWGVMESRSGNR
DVARKLWESGLKNCPRHGPLWQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat