prot_H-paniculata_contig29247.7976.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29247.7976.1
Unique Nameprot_H-paniculata_contig29247.7976.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 7.940e-7
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTA-RNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEEC 53
            TCF CG++GH+ R+C+  R KG+  T         G  +WCS+H T  HSDEEC
Sbjct:  223 TCFDCGEKGHIWRNCSEKRGKGKKKTKPA------GAAKWCSVHFTTRHSDEEC 270          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: UPI002013DDB3 (uncharacterized protein LOC125269966 isoform X2 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013DDB3)

HSP 1 Score: 51.6 bits (122), Expect = 3.710e-6
Identity = 22/54 (40.74%), Postives = 28/54 (51.85%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CG RGH+ RDC  +                G P+WCS H ++ HSDE CR
Sbjct:  133 TCYGCGNRGHVARDCRQK----------------GVPKWCSYHRSSTHSDETCR 170          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: A0A8M6Z6I4_DANRE (uncharacterized protein LOC108183933 n=1 Tax=Danio rerio TaxID=7955 RepID=A0A8M6Z6I4_DANRE)

HSP 1 Score: 50.8 bits (120), Expect = 6.790e-6
Identity = 21/54 (38.89%), Postives = 28/54 (51.85%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CG RGH+ RDC  +                G P+WC+ H ++ HSDE CR
Sbjct:  228 TCYGCGNRGHIARDCRQK----------------GVPKWCNYHRSSTHSDETCR 265          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: UPI0010547CC4 (uncharacterized protein LOC114454650 n=3 Tax=Gouania willdenowi TaxID=441366 RepID=UPI0010547CC4)

HSP 1 Score: 49.3 bits (116), Expect = 2.470e-5
Identity = 20/54 (37.04%), Postives = 27/54 (50.00%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CG RGH+ RDC  ++                 P+WC+ H +  HSDE CR
Sbjct:  216 TCYNCGNRGHMARDCRQKST----------------PKWCNYHRSTTHSDETCR 253          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 3.160e-5
Identity = 22/53 (41.51%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEEC 53
            TCF CG++GH++R+C  R +G+   G  +     G  +WC  H T  +SDEEC
Sbjct:  108 TCFGCGEKGHIRRNCLQR-RGK---GRQRKTKPAGATKWCCFHFTTKNSDEEC 156          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: A0A7D9MJB2_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9MJB2_PARCT)

HSP 1 Score: 47.8 bits (112), Expect = 8.350e-5
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CGKRGHL R+C A+++                 +WC+ H +  HSD  CR
Sbjct:  212 TCYGCGKRGHLVRECPAKSE----------------KKWCNYHKSTTHSDSTCR 249          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: A0A7D9K6X4_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9K6X4_PARCT)

HSP 1 Score: 47.8 bits (112), Expect = 8.360e-5
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CGKRGHL R+C A+++                 +WC+ H +  HSD  CR
Sbjct:  176 TCYGCGKRGHLVRECPAKSE----------------KKWCNYHKSTTHSDSTCR 213          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: A0A7D9IZG0_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IZG0_PARCT)

HSP 1 Score: 47.8 bits (112), Expect = 8.650e-5
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CGKRGHL R+C A+++                 +WC+ H +  HSD  CR
Sbjct:  212 TCYGCGKRGHLVRECPAKSE----------------KKWCNYHKSTTHSDSTCR 249          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: A0A6S7KN23_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=7 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KN23_PARCT)

HSP 1 Score: 47.8 bits (112), Expect = 8.690e-5
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CGKRGHL R+C A+++                 +WC+ H +  HSD  CR
Sbjct:  212 TCYGCGKRGHLVRECPAKSE----------------KKWCNYHKSTTHSDSTCR 249          
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Match: A0A6S7I9F2_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I9F2_PARCT)

HSP 1 Score: 47.8 bits (112), Expect = 8.710e-5
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 0
Query:    1 TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSDEECR 54
            TC+ CGKRGHL R+C A+++                 +WC+ H +  HSD  CR
Sbjct:  212 TCYGCGKRGHLVRECPAKSE----------------KKWCNYHKSTTHSDSTCR 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29247.7976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KW66_9PHAE7.940e-746.30CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI002013DDB33.710e-640.74uncharacterized protein LOC125269966 isoform X2 n=... [more]
A0A8M6Z6I4_DANRE6.790e-638.89uncharacterized protein LOC108183933 n=1 Tax=Danio... [more]
UPI0010547CC42.470e-537.04uncharacterized protein LOC114454650 n=3 Tax=Gouan... [more]
D7G6Q1_ECTSI3.160e-541.51CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7D9MJB2_PARCT8.350e-537.04Myosin heavy fast skeletal muscle (Fragment) n=1 T... [more]
A0A7D9K6X4_PARCT8.360e-537.04Myosin heavy fast skeletal muscle (Fragment) n=2 T... [more]
A0A7D9IZG0_PARCT8.650e-537.04Myosin heavy fast skeletal muscle (Fragment) n=4 T... [more]
A0A6S7KN23_PARCT8.690e-537.04Myosin heavy fast skeletal muscle (Fragment) n=7 T... [more]
A0A6S7I9F2_PARCT8.710e-537.04Myosin heavy fast skeletal muscle (Fragment) n=4 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 1..17
e-value: 2.1E-4
score: 30.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 1..16
e-value: 2.1E-6
score: 27.5
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 2..15
score: 10.197
NoneNo IPR availableGENE3D4.10.60.10coord: 1..24
e-value: 9.9E-8
score: 33.5
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29247contigH-paniculata_contig29247:41..208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29247.7976.1mRNA_H-paniculata_contig29247.7976.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29247 41..208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29247.7976.1 ID=prot_H-paniculata_contig29247.7976.1|Name=mRNA_H-paniculata_contig29247.7976.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
TCFFCGKRGHLKRDCTARNKGQAVTGEHKLDGGDGKPQWCSLHMTNNHSD
EECRVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf