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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1487 |
| Cds size | 861 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11242.796.1 >prot_H-paniculata_contig11242.796.1 ID=prot_H-paniculata_contig11242.796.1|Name=mRNA_H-paniculata_contig11242.796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=287bp
MPDNWLPPHMLVFTLWGPLGDDPEPEFNLHESGGPAKRRAGESREGGGGG
DNKPKPSAVTCPDVMKKPGENGAMLSRRQVAKRKKEEKEEAGKRHRATVE
ARTALVVSTRDTATEGKTLNVHMSRIAAMREARGRITSLEKAITLYRSMG
NDEMVHVTSYKLVALMNKPEGDETRLSGLPPVARPRTTSVGDDGGSGNTN
SDAGKDSNGGVAGSSEGGVGGDSEDGDTGSSEGDAGGDGNEYSAGSSEGG
VGRGSNDSVAGRSDSTDSNEDVGILDDGGGAQRQHR* back to topmRNA from alignment at H-paniculata_contig11242:2085..3571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11242.796.1 ID=mRNA_H-paniculata_contig11242.796.1|Name=mRNA_H-paniculata_contig11242.796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1487bp|location=Sequence derived from alignment at H-paniculata_contig11242:2085..3571+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGCCCGTGTCGACGCCTCCACCCTGCCGCCCTTCATCCAGCGAGGTGAA
AGTCAACTACGATCTGCCTTCGGGAGAGCAATCCCATGATTTCTTCGAGC
GGTTCGTCATGCACGTGTGGCTGCAGACGCAGAAAAGAAAGATACTTGCT
GCTCATAACCTCAAAAGAAAGCAAGAACGATAGGAGGGGGAAGCCCTACG
CCAAGCGGAAGAGGAGGCCAACGGCGCGACGGACGGCGGCGTGGGCAAGG
AACTGACCGGCAGGTCGTCGGCGCGGCAGACGCCAGCGACGAAGAATGTG
AAAATATTACGGTGGAAAACATAATCGACGACGGGTACCCCCCGATGCCG
GATAATTGGCTGCCGCCGCACATGCTCGTGTTCACGCTTTGGGGACCTCT
TGGTGATGATCCCGAACCGGAGTTCAATCTTCACGAATCCGGTGGCCCCG
CCAAGCGTCGTGCCGGTGAGTCGAGGGAGGGAGGCGGGGGGGGCGACAAC
AAGCCCAAGCCCAGCGCAGTGACATGCCCCGATGTCATGAAGAAGCCGGG
CGAGAACGGGGCTATGCTTAGCCGGCGACAGGTTGCCAAACGCAAAAAAG
AGGAGAAAGAGGAAGCCGGCAAACGGCATAGAGCCACGGTGGAGGCGCGC
ACCGCACTCGTCGTCAGCACCCGCGATACTGCGACAGAGGGTAAGACCCT
CAACGTCCACATGAGCAGAATCGCAGCGATGCGGGAAGCCCGGGGTAGGA
TTACGAGTCTGGAAAAGGCGATCACCCTGTACAGATCGATGGGCAACGAC
GAGATGGTCCACGTCACCTCTTACAAGCTCGTCGCTCTCATGAATAAACC
GGAGGGAGATGAAACGCGGCTGAGCGGCCTCCCTCCGGTAGCGCGCCCCA
GGACGACCAGCGTCGGCGATGACGGCGGGTCAGGCAACACCAACAGCGAC
GCTGGGAAAGACAGCAACGGAGGTGTCGCCGGGAGCAGCGAAGGCGGCGT
GGGGGGGGACAGCGAGGATGGTGATACCGGCAGCAGCGAAGGCGACGCGG
GGGGGGACGGCAATGAGTATTCCGCCGGCAGCAGCGAAGGCGGCGTGGGG
AGGGGCAGCAACGATAGTGTTGCCGGCAGAAGCGATAGCACGGACAGTAA
CGAAGACGTGGGCATCCTCGACGATGGGGGGGGGGCGCAGCGGCAGCATA
GGTAGTGCCCGTACACGGGTCGTTCACAGCGTTATCAATGTCGACGTAGA
ATAGGAATGGTCAGGCCCTCACGGCGTGACTTAAGTGTGACCGAAGGATG
CGCGGCATTTGACTTTTTGGCTTGCTTGATTTAATGTAGAAAGGGATGGG
GGCGGAGCGGTGCCGCCGCAAGTTCCAATGGCCGACAGCAGCACGTGTGT
TGGATATATTTCTAATTGTCTGCGAACAGTGAGCGACTGTTTCTCTTAGT
TATTTCGTGTGTGTGGGGGGGGGAGGTATTCTGTGAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig11242:2085..3571+ >mRNA_H-paniculata_contig11242.796.1 ID=mRNA_H-paniculata_contig11242.796.1|Name=mRNA_H-paniculata_contig11242.796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1722bp|location=Sequence derived from alignment at H-paniculata_contig11242:2085..3571+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGGATAATTGGCTGCCGCCGCACATGCTCGTGTTCACGCTTTGGGG
ACCTCTTGGTGATGATCCCGAACCGGAGTTCAATCTTCACGAATCCGGTG
GCCCCGCCAAGCGTCGTGCCGGTGAGTCGAGGGAGGGAGGCGGGGGGGGC
GACAACAAGCCCAAGCCCAGCGCAGTGACATGCCCCGATGTCATGAAGAA
GCCGGGCGAGAACGGGGCTATGCTTAGCCGGCGACAGGTTGCCAAACGCA
AAAAAGAGGAGAAAGAGGAAGCCGGCAAACGGCATAGAGCCACGGTGGAG
GCGCGCACCGCACTCGTCGTCAGCACCCGCGATACTGCGACAGAGGGTAA
GACCCTCAACGTCCACATGAGCAGAATCGCAGCGATGCGGGAAGCCCGGG
GTAGGATTACGAGTCTGGAAAAGGCGATCACCCTGTACAGATCGATGGGC
AACGACGAGATGGTCCACGTCACCTCTTACAAGCTCGTCGCTCTCATGAA
TAAACCGGAGGGAGATGAAACGCGGCTGAGCGGCCTCCCTCCGGTAGCGC
GCCCCAGGACGACCAGCGTCGGCGATGACGGCGGGTCAGGCAACACCAAC
AGCGACGCTGGGAAAGACAGCAACGGAGGTGTCGCCGGGAGCAGCGAAGG
CGGCGTGGGGGGGGACAGCGAGGATGGTGATACCGGCAGCAGCGAAGGCG
ACGCGGGGGGGGACGGCAATGAGTATTCCGCCGGCAGCAGCGAAGGCGGC
GTGGGGAGGGGCAGCAACGATAGTGTTGCCGGCAGAAGCGATAGCACGGA
CAGTAACGAAGACGTGGGCATCCTCGACGATGGGGGGGGGGCGCAGCGGC
AGCATAGGTAGATGCCGGATAATTGGCTGCCGCCGCACATGCTCGTGTTC
ACGCTTTGGGGACCTCTTGGTGATGATCCCGAACCGGAGTTCAATCTTCA
CGAATCCGGTGGCCCCGCCAAGCGTCGTGCCGGTGAGTCGAGGGAGGGAG
GCGGGGGGGGCGACAACAAGCCCAAGCCCAGCGCAGTGACATGCCCCGAT
GTCATGAAGAAGCCGGGCGAGAACGGGGCTATGCTTAGCCGGCGACAGGT
TGCCAAACGCAAAAAAGAGGAGAAAGAGGAAGCCGGCAAACGGCATAGAG
CCACGGTGGAGGCGCGCACCGCACTCGTCGTCAGCACCCGCGATACTGCG
ACAGAGGGTAAGACCCTCAACGTCCACATGAGCAGAATCGCAGCGATGCG
GGAAGCCCGGGGTAGGATTACGAGTCTGGAAAAGGCGATCACCCTGTACA
GATCGATGGGCAACGACGAGATGGTCCACGTCACCTCTTACAAGCTCGTC
GCTCTCATGAATAAACCGGAGGGAGATGAAACGCGGCTGAGCGGCCTCCC
TCCGGTAGCGCGCCCCAGGACGACCAGCGTCGGCGATGACGGCGGGTCAG
GCAACACCAACAGCGACGCTGGGAAAGACAGCAACGGAGGTGTCGCCGGG
AGCAGCGAAGGCGGCGTGGGGGGGGACAGCGAGGATGGTGATACCGGCAG
CAGCGAAGGCGACGCGGGGGGGGACGGCAATGAGTATTCCGCCGGCAGCA
GCGAAGGCGGCGTGGGGAGGGGCAGCAACGATAGTGTTGCCGGCAGAAGC
GATAGCACGGACAGTAACGAAGACGTGGGCATCCTCGACGATGGGGGGGG
GGCGCAGCGGCAGCATAGGTAG back to top
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