prot_H-paniculata_contig29155.7952.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29155.7952.1
Unique Nameprot_H-paniculata_contig29155.7952.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length139
Homology
BLAST of mRNA_H-paniculata_contig29155.7952.1 vs. uniprot
Match: A0A6H5KU96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU96_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.900e-25
Identity = 74/159 (46.54%), Postives = 82/159 (51.57%), Query Frame = 0
Query:    3 QILGAFEANAFSEHDLRLARERWAASSGNTTNXXXXXXXXNTNTPVKR----------------------KRAQVCAMDVVGDGVEGGDETGAKRAERDRDGSKDKATRYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLIIAASLKSQIGLANDSPVS 139
            + LGAFEAN+FSEHDLRLARE+WAA  G           X                              K A+        DG EG  ETG                 YFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLI+AASLK+++  A DSP S
Sbjct:  104 KTLGAFEANSFSEHDLRLAREKWAADGGGCGGCGLSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAEAAPAPAARDGAEGETETGGPV--------------YFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNS 248          
BLAST of mRNA_H-paniculata_contig29155.7952.1 vs. uniprot
Match: D7G2N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N9_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 7.140e-23
Identity = 78/146 (53.42%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    3 QILGAFEANAFSEHDLRLARERWAASSGNTTNXXXXXXXXNTNTPVKRKRAQVCAMDVVGDG--------VEGGDETGAKRAERDRDG-SKDKATRYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLIIAASLKSQIGLANDSPVS 139
            +ILGAFEANAFSEHDLRLARE+WAA       XXXXXXXX                                G     A  A    +G S++    YFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLI+AASLK+++  A DSP S
Sbjct:  386 KILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAGAAPAPAPAAREVAEGESEEGGPVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNS 531          
BLAST of mRNA_H-paniculata_contig29155.7952.1 vs. uniprot
Match: A0A7S2W205_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W205_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.440e-6
Identity = 52/145 (35.86%), Postives = 64/145 (44.14%), Query Frame = 0
Query:    4 ILGAFEANAFSEHDLRLARERWAASSGNTTNXXXXXXXXNTNTPVK-RKRAQVCAMDVVGDGVEGGDET--GAKRAERDRD------------GSKDKATRYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLIIAASLKSQIGLA 133
            +L AFE  AF EH+L   R  +A+               N + P   R  A   AM    D +     T  G +    D D            G     + YFG KYLT+SRLLRLQL DP LRLQV TQ  ++ A LK+Q   A
Sbjct:  316 VLRAFEFYAFHEHELEQGRLGYASRR-------------NASLPEHLRGTAPKLAMAPATDALSSDPSTPGGGEPKSMDLDTTPVSARKGASGGGTSDTSPYFGCKYLTTSRLLRLQLVDPQLRLQVTTQLWVLFAHLKAQAPAA 447          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29155.7952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KU96_9PHAE1.900e-2546.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2N9_ECTSI7.140e-2353.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W205_9STRA4.440e-635.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021861THO complex, subunit THOC1PFAMPF11957efThoc1coord: 12..127
e-value: 2.1E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29155contigH-paniculata_contig29155:941..2240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29155.7952.1mRNA_H-paniculata_contig29155.7952.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29155 941..2240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29155.7952.1 ID=prot_H-paniculata_contig29155.7952.1|Name=mRNA_H-paniculata_contig29155.7952.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp
MRQILGAFEANAFSEHDLRLARERWAASSGNTTNTTNNNNNANTNTPVKR
KRAQVCAMDVVGDGVEGGDETGAKRAERDRDGSKDKATRYFGLKYLTSSR
LLRLQLRDPTLRLQVLTQWLIIAASLKSQIGLANDSPVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021861THO_THOC1