prot_H-paniculata_contig2905.7920.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2905.7920.1
Unique Nameprot_H-paniculata_contig2905.7920.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length702
Homology
BLAST of mRNA_H-paniculata_contig2905.7920.1 vs. uniprot
Match: D7FIF6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI)

HSP 1 Score: 726 bits (1873), Expect = 6.900e-238
Identity = 416/740 (56.22%), Postives = 489/740 (66.08%), Query Frame = 0
Query:    1 RYGGGDSYFPGEVSCLEDGVSVNFDAGWHGASIPVADVKREGQRPKAHVRGTGASGEAVSLLRARGSILDLDVGSLGGDTCSVGDQVKIRTPKPTRGGAPETKIGVVRAVHPNGTCLIVFPDGTLRQATDQIQHSSITPHDWTSPLSDTYKKAME------TAVPSHMAPHLGLVQDARKRSRVNNANNSMGVSDEKPHDQDKSQGMNTEIGAGSKIIPTEIGKGGMVAPQNRRARFLRRGTHAGVVESGEPKLRP--TLLHLSPEAFMDPDSAAESILTPNNAGMFRPRA---------PGHKNILPEMSYNTTTDSESSSDTASRDGGNENRG---RDAKQTAADRV----GFSTKTSPGNPTLP--PTGKRPPLLRRMTFGGLRSDKAGEVYNAQRRPSFMSNLGKRVVKAAEVATKAARRISIAGNNGQGFELVAIEDRKKSTA--------------AGGNEGDSLDHCENETHFHNRLRHIYEPQHTETAPSSWWIRVCGTLNIICLAFYLHWRFTRSLINVPNYIWAWLFLGAECIMAIGTVVGHSSRSFPVHREKVYMDDLVDVDEQMGKLKVAILVPTCGERTGTLLQALFGNLQLRLWRSPNARCETLRILVLDEKRREEVQNLVSLVYTLAEVVLDQTVREILMREGVAPVSAKGFYNHFANGEHGQRMYDDVNFIRGIEIVSEIDKLIAANDDSINRFAPSVAISRIKERARRASCFDRKEITPGQKK 700
            RY G   ++PG V+  EDGVSVNFD GWHGASIP+ DV+R   +P     G  ++  A + L + G ILDLDVGSLGGDT +VGDQV+ R     R G P+T  GV+R  HPNG+ L+ F DGT R   DQ+Q  S+T  DWT   S+ Y++A        TAV                      A     +   KP        M    G   K+ P   G G             RR TH GVV+SGEP LR    +LH   + FMDPD+AA++ILTPNNAGMFRP            GH+    E+SYN+TTD ES +D    DG + NR    R    T   ++      S K +     +P   TG  P   RRMTFGGLRSDK GEVY  QRRPSF+ ++G+R  + AE A KA RRISI GNNGQGFELVAI DRK+ST               AG N   S DH ENETHF+NR RH++EPQHTE+APS+WWIR  G +N++C+A YL WR TRSL  V + IWA++FL AECIMAIG +VGHSSRSFP HREKVYMDDL D+DE +G LKVA+L+PTCGE+T  +L+ALFGNLQLRLW+S NAR +TLRILVLDEKRREEV  LVSLVYTL+EVVLD+TVREILMREGVAP+SAKGFY HFANGEHGQRMYDDVNFIRGIE+VSEIDKLIA NDD+I+RF+PSVAISRIKERARRASCFDRKEI PGQKK
Sbjct:  839 RYAGEPEFYPGVVTSTEDGVSVNFDKGWHGASIPLKDVRRPNVKPGRSRDGKPSTLSAGARLSSTGCILDLDVGSLGGDTFAVGDQVQFRLTLGLRAGPPQTHNGVIRTAHPNGSYLVGFEDGTTR---DQVQVRSLTGFDWTPHGSEAYRRAATDTSQATTAVXXXXXXXXXXXXXXXSHGATTGAGAVSPLDSGKPSKGPPRGSMFDRFGFPRKVFPDGGGLGXXXXXXXXXXVLQRRATHGGVVDSGEPGLRVDVNMLHFRSQ-FMDPDTAAQAILTPNNAGMFRPHVIGRGGGGGRGGHRQTASELSYNSTTD-ESDAD-RDEDGDSNNRAAGHRPGDHTRTKKIEGPRSSSKKNNNAARVVPVVSTGSAP--KRRMTFGGLRSDKTGEVYKEQRRPSFLEDIGRRATEMAEAAAKATRRISIHGNNGQGFELVAIGDRKQSTHETGRRKSAKKGGKDAGENSSGS-DHSENETHFYNRRRHVFEPQHTESAPSAWWIRTIGVINLLCMAAYLWWRITRSLKGVDHIIWAFIFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDIDEAIGALKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNARRDTLRILVLDEKRREEVHKLVSLVYTLSEVVLDKTVREILMREGVAPISAKGFYEHFANGEHGQRMYDDVNFIRGIEVVSEIDKLIAENDDNISRFSPSVAISRIKERARRASCFDRKEIQPGQKK 1569          
BLAST of mRNA_H-paniculata_contig2905.7920.1 vs. uniprot
Match: A0A6H5KTF3_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF3_9PHAE)

HSP 1 Score: 690 bits (1781), Expect = 3.070e-232
Identity = 410/781 (52.50%), Postives = 484/781 (61.97%), Query Frame = 0
Query:    2 YGGGDSYFPGEVSCLEDGVSVNFDAGWHGASIPVADVKREGQRPKAHVRGTGASGEAVSLLRARGSILDLDVGSLGGDTCSVGDQVKIRTPKPTRGGAPETKIGVVRAVHPNGTCLIVFPDGTLRQATDQIQHSSITPHDWTSPLSDTYKKAMETAVPSHMAPHLGLVQDARKRSRVNNANNSMGVSDEKPHDQDKSQ------GMNTEIGAGSKIIPTEIGKGGMVAPQNRRARFLRRGTHAGVVESGEPKLR--PTLLHLSPEAFMDPDSAAESILTPNNAGMFRP---------RAPGHKNILPEMSYNTTTDSESSSDTASRDGGNENRG---RDAKQTAADRVGFSTKTSPGNPT------LPPTGKRPPLLRRMTFGGLRSDKAGEVYNAQRRPSFMSNLGKRVVKAAEVATKAARRISIAGNNGQGFELVAIEDRKKSTA--------------AGGNEGDSLDHCENETHFHNRLRHIYEPQHTETAPSSWWIRVCGTLNIICLAFYLHWRFTRSLINVPNYIWAWLFLGAECIMAIGTVVGHSSRSFPVHREKVYMDDLVDVDEQMGKLKVAILVPTCGERTGTLLQALFGNLQLRLWRSPNARCETLRILVLDEKRREEVQNLVSLVYTLAEV------------------------------------------VLDQTVREILMREGVAPVSAKGFYNHFANGEHGQRMYDDVNFIRGIEIVSEIDKLIAANDDSINRFAPSVAISRIKERARRASCFDRKEITPGQKK 700
            Y G   ++PG V+  EDGVSVNFD GWHGASIP+ DV+R   +P     G   +  A + LR+ G ILDLDVGSLGGDT +VGDQV+ R     + G P+T  GV+R  HPN + L+ F DGT R   DQ+   S+T  +WT   S+ Y++A      +  A                +   + G     P D  K         M        KI P   G G             RR TH GVV+SGEP LR    ++H   + FMDPD+AA++ILTPNNAGMFRP         R  GH+    E+SYN+TTD ES +D    DG + NR    R    T   ++     +S  N        +  TG  P   RRMTFGGLRSDK GEVY  QRRPSF+ ++G+R  + AE A KA RRISI GNNGQGFELVAI DRK+ST               AG N   S D  ENETHF+NR RH++EPQHTE+APS+WWIR  G +N++C+A YL WR TRSL  V + IWA++FL AECIMAIG +VGHSSRSFP HREKVYMDDL D+DE +G LKVA+L+PTCGE+T  +L+ALFGNLQLRLW+S N R +TLRILVLDEKRREEVQ LVSLVYTL+EV                                          VLD+TVREILMREGV P+SAKGFY HFANGEHGQRMYDDVNFIRGIEIVSEIDKLIA NDDSI+RF+PSVAISRIKERARRASCFDRKEI PGQKK
Sbjct:  367 YAGKPEFYPGVVTSTEDGVSVNFDKGWHGASIPLKDVRRPNVKPGRSSDGKPPTLSAGARLRSTGCILDLDVGSLGGDTFAVGDQVQFRLTLGLQAGPPQTHNGVIRTAHPNRSYLVGFEDGTTR---DQVLVKSLTGFEWTPHGSEAYRRAATDTSQATTAAXXXXXPGQXXXXXDGSRGATTGAGAVSPLDSGKLSKAPPRGSMFDRFRFPGKIFPDGGGLGRTTGXXXXXXVLQRRATHGGVVDSGEPGLRVDANMMHFRSQ-FMDPDTAAQAILTPNNAGMFRPHVIGRGGGGRRGGHRQTASELSYNSTTD-ESDAD-REEDGDSNNRAAGHRPGDHTRTKKIEGPRSSSKENNNAARVVPVVSTGSAP--KRRMTFGGLRSDKRGEVYKEQRRPSFLQDIGRRATEMAEAAAKATRRISIHGNNGQGFELVAIGDRKQSTHETGRRKSAKKGGKDAGENSSGS-DLSENETHFYNRRRHVFEPQHTESAPSAWWIRTIGVINLLCMAAYLWWRITRSLKGVDHIIWAFIFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDIDEAIGALKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNTRRDTLRILVLDEKRREEVQKLVSLVYTLSEVSILLQSGTVYVRGGLAKKSKIAPNIHRVTRDQTLRSSTSPKVVLDKTVREILMREGVVPISAKGFYEHFANGEHGQRMYDDVNFIRGIEIVSEIDKLIAENDDSISRFSPSVAISRIKERARRASCFDRKEIQPGQKK 1138          
BLAST of mRNA_H-paniculata_contig2905.7920.1 vs. uniprot
Match: A0A835YIK8_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK8_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.940e-56
Identity = 118/234 (50.43%), Postives = 155/234 (66.24%), Query Frame = 0
Query:  480 RFTRSLINVPNYIWAWLFLGAECIMAIGTVVGHSSRSFPVHREKVYMDDLVDVDEQMGKLKVAILVPTCGERTGTLLQALFGNLQLRLWRSPNARCETLRILVLDEKRREEVQNLVSLVYTLAEVVLDQTVREILMREGVAPVSAKGFYNHFANGEHGQRMY-DDVNFIRGIEIVSEIDKLIAANDDSINRFAPSVAISRIKE---------------RARRASCFDRKEITPG 697
            R T+SL  +   IW ++F GAE ++ +G +V H SR+FP+HRE+V MD+LVD D Q G LKVAIL+PT GE+   +LQALFG LQLRLW S  ARC+TLR+++LDEKRR +VQ L SLVYTLAEVVLD+ VR+IL RE V   +A+ FY  F++G     M  D++ F+RG+ IV EIDKL+  +D S++R   +   S                   RARRASCF +  I+PG
Sbjct:   14 RLTKSLDGIKYPIWGYIFFGAEVLLIVGLLVSHVSRAFPIHRERVTMDELVDSDPQTGDLKVAILLPTAGEKLQVMLQALFGVLQLRLWSSSRARCDTLRVIILDEKRRWQVQQLASLVYTLAEVVLDKGVRDILRREEVPASTARAFYELFSDGLRRHTMNTDNLMFVRGVAIVDEIDKLLHDSDGSVHRLDGTATTSLAPPXXXXXXXXXXXXXXVRARRASCFVQNTISPG 247          
BLAST of mRNA_H-paniculata_contig2905.7920.1 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 2.360e-31
Identity = 85/225 (37.78%), Postives = 125/225 (55.56%), Query Frame = 0
Query:  450 PQHTETAPSSWWIRVCGTLNIICLAFYLHWRFTRSL---INVPNYI-----WAWLFLGAECIMAIGTVVGHSSRSFPVHREKVYMDDLVDVDEQMG-KLKVAILVPTCGERTGTLLQALFGNLQLRLWRSPNARCETLRILVLDEKRREEVQNLVSLVYTLAEVVLDQTVREILMREGVAPVSAKGFYNHFANGEHGQR--MYDDVNFIRGIEIVSEIDKLIAAN 663
            PQ     PS+  +RV    N      YLHWR+T +    +   +Y+     W WLF  AE  +AI   VG + R FPV R KV MDD+  VD+Q+G   +V IL+PT GE    + +AL G L  RLW S     +TLR++VLDEKRR EV  + + V+ + E++  + +++ILM EGV  ++ KGF +   NG   +R  +YDD      ++++  +D +  AN
Sbjct:  257 PQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLRVIVLDEKRRLEVYRVAAGVHRIGELLAGRRIQQILMAEGVTELTQKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLAN 481          
BLAST of mRNA_H-paniculata_contig2905.7920.1 vs. uniprot
Match: A0A836CP13_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP13_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.040e-29
Identity = 76/197 (38.58%), Postives = 109/197 (55.33%), Query Frame = 0
Query:  449 EPQHTETAPSSWWIRVCGTLNIICLAFYLHWRFTRSLINVPNYI----------WAWLFLGAECIMAIGTVVGHSSRSFPVHREKVYMDDLVDVDEQMG-KLKVAILVPTCGERTGTLLQALFGNLQLRLWRSPNARCETLRILVLDEKRREEVQNLVSLVYTLAEVVLDQTVREILMREGVAPVSAKGFYNHFANG 634
            +PQ     PS++ IR    LNI     YL WR TR++  + +Y           WAW F   E  + I   +GH+ R F V R ++ MDD+V  D+ +G   +VAIL+PT GE+   +++AL G + LR W +   +C   R++VLDEKRR+ V N+ + VY LA +V    V  IL  EGV  ++AKGFY  +  G
Sbjct:  335 DPQGMTPLPSAFVIRAIVVLNICVSCAYLWWRVTRTIFQIDDYFFGIPFLPVQGWAWAFYAVEICLTIAIWIGHTQRLFAVQRVRLTMDDIVREDDSVGYNSRVAILLPTNGEKLDVVMKALLGVVSLRGWDTSVEKCAAQRVVVLDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVHAITAKGFYEWWKTG 531          
BLAST of mRNA_H-paniculata_contig2905.7920.1 vs. uniprot
Match: A0A835ZCE1_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE1_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.360e-26
Identity = 75/223 (33.63%), Postives = 120/223 (53.81%), Query Frame = 0
Query:  462 IRVCGTLNIICLAFYLHWRFTRSLINVPNY----------IWAWLFLGAECIMAIGTVVGHSSRSFPVHREKVYMDDLVDVDEQMG-KLKVAILVPTCGERTGTLLQALFGNLQLRLWRSPN-ARCETLRILVLDEKRREEVQNLVSLVYTLAEVVLDQTVREILMREGVAPVSAKGFYN--HFANGEHGQRMYDDVNFIRGIEIVSEIDKLIAANDDSINRF 670
            +R+    N+   A YL+WR T ++  +  Y          IWAW+F G E  + IG ++GH+ R FP+ R  V M+DLV  D+ +G   +VAIL+P+ GER   ++ AL G +    WR  N    + LRI++LDEKRR+ V N+ + VY L  ++ +  V  IL  EG+   + KGFY+   F  G   + +Y+D    +   ++  ++K     +D+ + F
Sbjct:  222 LRLIMAANVGFSALYLYWRATSTITTIDTYFYNIKYFPVQIWAWVFYGVEICLTIGILIGHTQRMFPIKRAIVAMEDLVREDDCVGYNARVAILLPSAGERLDIVMLALLGAMSQSTWRGGNRTTSQMLRIIILDEKRRKGVLNMTAAVYALGTLIRNPEVVTILQAEGIDAENVKGFYDWWKFGGGYARKHLYNDPWLNKACLLLEYMEKHAGNGEDADSIF 444          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2905.7920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FIF6_ECTSI6.900e-23856.22Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
A0A6H5KTF3_9PHAE3.070e-23252.50GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835YIK8_9STRA1.940e-5650.43Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
D7FSC3_ECTSI2.360e-3137.78Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
A0A836CP13_9STRA4.040e-2938.58Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A835ZCE1_9STRA1.360e-2633.63Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 480..490
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 491..511
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 512..702
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 460..479
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..459
NoneNo IPR availableTMHMMTMhelixcoord: 491..513
NoneNo IPR availableTMHMMTMhelixcoord: 460..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2905contigH-paniculata_contig2905:12392..19407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2905.7920.1mRNA_H-paniculata_contig2905.7920.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2905 12391..19407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2905.7920.1 ID=prot_H-paniculata_contig2905.7920.1|Name=mRNA_H-paniculata_contig2905.7920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=702bp
RYGGGDSYFPGEVSCLEDGVSVNFDAGWHGASIPVADVKREGQRPKAHVR
GTGASGEAVSLLRARGSILDLDVGSLGGDTCSVGDQVKIRTPKPTRGGAP
ETKIGVVRAVHPNGTCLIVFPDGTLRQATDQIQHSSITPHDWTSPLSDTY
KKAMETAVPSHMAPHLGLVQDARKRSRVNNANNSMGVSDEKPHDQDKSQG
MNTEIGAGSKIIPTEIGKGGMVAPQNRRARFLRRGTHAGVVESGEPKLRP
TLLHLSPEAFMDPDSAAESILTPNNAGMFRPRAPGHKNILPEMSYNTTTD
SESSSDTASRDGGNENRGRDAKQTAADRVGFSTKTSPGNPTLPPTGKRPP
LLRRMTFGGLRSDKAGEVYNAQRRPSFMSNLGKRVVKAAEVATKAARRIS
IAGNNGQGFELVAIEDRKKSTAAGGNEGDSLDHCENETHFHNRLRHIYEP
QHTETAPSSWWIRVCGTLNIICLAFYLHWRFTRSLINVPNYIWAWLFLGA
ECIMAIGTVVGHSSRSFPVHREKVYMDDLVDVDEQMGKLKVAILVPTCGE
RTGTLLQALFGNLQLRLWRSPNARCETLRILVLDEKRREEVQNLVSLVYT
LAEVVLDQTVREILMREGVAPVSAKGFYNHFANGEHGQRMYDDVNFIRGI
EIVSEIDKLIAANDDSINRFAPSVAISRIKERARRASCFDRKEITPGQKK
AR
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