prot_H-paniculata_contig2840.7751.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2840.7751.1
Unique Nameprot_H-paniculata_contig2840.7751.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length432
Homology
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: D8LBR6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBR6_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 4.210e-120
Identity = 297/433 (68.59%), Postives = 321/433 (74.13%), Query Frame = 0
Query:   11 SNLDSFFKRLGQGQGSSRLWAGPGQRSGAAVPGSLRT-RVHSRTGSSSGXXXXXINTATAESRXXXXXXXXXXXXXXXXXXXXXXXXXXVASTAAGIRRQHTNGAGDLSLSPLGTTGGWSELEGT--------TRNGASGGXXXXXXGIAFANYGRNLRDPLPSXXXXXXXXXXXXXXXXXXXR--RSSTGEHLSPAAATRTTAIEALPSAXXXXXXXXXXXXXXXXXXXXXXGSESASMHSRELVSRPSYRDKRFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            SNLDSFFKRLGQGQ SSRLWAGPG RSGA VPGSLRT R+  R  S          +  A + XXXXXXXXXXXXXXXXXXXXXXXXXX    A   R +    A DLS  P GT  GWSEL G+         R G  G  XX   G                XXXXXXXXXXXXXXXXXX R   ++TG   + +AAT   A  A       XXXXXXXXXXXXXXXXXX  +++ +  +  L +RPSYRDKRF++VL EEVV++D+LR+LSWNGVPP+HRA VWQLLVGYMPANR RR   LERKRREY EAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQ+KVQRAMERILYIWAIRHPASGYVQGINDL+TPLYVVFLSAHVGPSVES DVSKVDE LL EVEADVYWCLTKLLDNIQ
Sbjct:   20 SNLDSFFKRLGQGQ-SSRLWAGPG-RSGA-VPGSLRTSRLQPRNNSGD-------ISRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAENDRGRRIGTAEDLS--PFGTRQGWSELTGSGGGGTGGVNRPGGGGSAXXTPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRPPNATTGSPQTLSAATAIGAGSASTKQQSKXXXXXXXXXXXXXXXXXXAAAQAPAAAAPALATRPSYRDKRFEDVLGEEVVELDELRKLSWNGVPPVHRAAVWQLLVGYMPANRARREAALERKRREYWEAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSAHVGPSVESKDVSKVDEALLDEVEADVYWCLTKLLDNIQ 440          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: A0A7S1U894_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U894_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.800e-74
Identity = 114/185 (61.62%), Postives = 146/185 (78.92%), Query Frame = 0
Query:  247 RPSYRDKRFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNI 431
            R SY+D +F E+L+ EVV +++L+ L+WNGVP  HR+ VW+L++GY+P+N  RR   L+RKRREY E+VPQYFD+PD  R+ QEQ++LRQ+LVDVPRT P VP FH E++ R MERILYIWAIRHPASGYVQGIN L+TP ++VFLS  +G +    DV +VD  +L EVEAD YWC+TKLLD I
Sbjct:   18 RMSYKDAQFAELLQAEVVDLERLKSLAWNGVPLGHRSMVWKLILGYLPSNASRRPGTLKRKRREYAESVPQYFDIPDQQRTSQEQDLLRQVLVDVPRTAPGVPLFHNERIHRCMERILYIWAIRHPASGYVQGINGLLTPFFLVFLSGLIGENAAYCDVGRVDAAVLDEVEADTYWCITKLLDAI 202          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: A0A7S2S4T0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4T0_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.290e-69
Identity = 117/188 (62.23%), Postives = 149/188 (79.26%), Query Frame = 0
Query:  249 SYRDKRFDEVLRE-EVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHV---GPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            +YR++RF E+L + EVV +++L++LSW+GVP   R  VWQLL+ Y+P++R RR   L RKR+EY +AVP +FDVP A+R++QEQ +LRQILVDVPRT PDVP FHQ  +QR MER+LYIW+IRHPASGYVQG+NDL TPL+VVFLSA V     SVE+ D +++ +  L  VEAD YWCLTKLLDNIQ
Sbjct:  162 TYRERRFRELLFDSEVVNLEELKKLSWSGVPSKWRPMVWQLLLAYLPSDRKRREATLTRKRKEYADAVPAFFDVPSASRTMQEQKMLRQILVDVPRTSPDVPLFHQAVIQRCMERLLYIWSIRHPASGYVQGMNDLATPLFVVFLSAAVERSSASVEAMDAARLSKEALTNVEADTYWCLTKLLDNIQ 349          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: A0A836C8P8_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P8_9STRA)

HSP 1 Score: 224 bits (571), Expect = 9.770e-66
Identity = 118/198 (59.60%), Postives = 137/198 (69.19%), Query Frame = 0
Query:  244 LVSRPSYRDKRFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVP-DAARSLQEQNILRQILVDVPRTCPDVPFFHQ-EKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHV-------GPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            L SRPS+RD ++ E+L  +VV +  LR+L+WNGVPP +R  VW+LL GYMPANR RRA  L RKRREY EAV  +F    DAARS QEQ +LRQILVD+PRT PD P F +   VQR+M R LY+WA RHPASGYVQGINDL+TP YVVFL  HV                  + E  L E+EAD YWCLTKLLDNIQ
Sbjct:   44 LQSRPSFRDSKYSEILGADVVSLPDLRRLAWNGVPPAYRPTVWKLLCGYMPANRDRRAAALARKRREYAEAVAAHFAAAADAARSAQEQALLRQILVDIPRTAPDAPLFAEVAAVQRSMTRALYVWAQRHPASGYVQGINDLLTPFYVVFLGEHVVGGEGXXXXXXXXXXXXXLPEEALKEIEADAYWCLTKLLDNIQ 241          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: V9EP87_PHYPR (Rab-GAP TBC domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=V9EP87_PHYPR)

HSP 1 Score: 219 bits (558), Expect = 1.960e-62
Identity = 108/178 (60.67%), Postives = 135/178 (75.84%), Query Frame = 0
Query:  255 FDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            F+++L +EVV +DQLR+LSW G+P  +R  VW+LL+GYMP+ + RRA +LERKR+EY E + QY+ +PD  R  +EQ  LRQILVD+PRT  DV  F  E++ + MER+LYIWAIRHPASGYVQGINDLMTP  VVFLSA V    +  D+SKV +  L  VEAD YWCLTKLLD+IQ
Sbjct:  191 FEQLLEKEVVDLDQLRKLSWGGIPTNYRPTVWRLLLGYMPSKKDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVRLFQNERIHQCMERVLYIWAIRHPASGYVQGINDLMTPFLVVFLSAFVDDP-QRCDLSKVSDENLQIVEADSYWCLTKLLDDIQ 367          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: UPI00142E8F3F (TBC1 domain family member 22B-like isoform X1 n=2 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E8F3F)

HSP 1 Score: 213 bits (541), Expect = 1.100e-61
Identity = 103/179 (57.54%), Postives = 133/179 (74.30%), Query Frame = 0
Query:  254 RFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            +F++VL +  V ++ LR+L+WNGVP   R DVW+LL+GY P N  RR  VL RKR EY E+V Q++D+PD+ RS  E N+LRQI +D PRT PDV FF Q +VQ+++ERILY WAIRHPASGYVQGINDL+TP  V+FLS ++   VES  +S +    + +VEAD YWCLTKLLD +Q
Sbjct:  152 KFNKVLSDTTVILENLRELAWNGVPHYMRPDVWRLLLGYAPPNSDRREAVLRRKRLEYLESVGQFYDLPDSERSDDEINMLRQIALDCPRTVPDVSFFQQAQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVIFLSEYLEGGVESWSMSDLSSEKISDVEADCYWCLTKLLDGMQ 330          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: A0A2P6QAN2_ROSCH (Putative Rab-GTPase-TBC domain-containing protein n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6QAN2_ROSCH)

HSP 1 Score: 215 bits (547), Expect = 2.120e-61
Identity = 107/184 (58.15%), Postives = 135/184 (73.37%), Query Frame = 0
Query:  249 SYRDKRFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            S R  +F +VL    V +++LR+L+W+G+PP  R DVW+LL+GY P+N  RR  VL RKR EY + V QY+D+PD  RS  E N+LRQI VD PRT PDV FF QE+VQ+++ERILY WAIRHPASGYVQGINDL+TP  VVFLS H+  SV+S  +S +    +  VEAD YWCL+KLLD +Q
Sbjct:  130 SARVMKFTKVLSGTTVILEKLRELAWSGIPPYMRPDVWRLLLGYAPSNSDRREGVLRRKRLEYLDCVSQYYDIPDTERSDDEINMLRQIAVDCPRTVPDVSFFQQEQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLDGSVDSWSISVLSTDQICIVEADCYWCLSKLLDGMQ 313          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: A0A3F2RUN4_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUN4_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.780e-61
Identity = 107/178 (60.11%), Postives = 135/178 (75.84%), Query Frame = 0
Query:  255 FDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            F+ +L++EVV +DQLR+LSW GVP  +R  VW+LL+GYMP+ + RRA +LERKR+EY E + QY+ +PD  R  +EQ  LRQILVD+PRT  DV  F  E++ + MER+LYIW+IRHPASGYVQGINDLMTP  VVFLSA V    ++ D+S V +  L  VEAD YWCLTKLLD+IQ
Sbjct:  193 FERLLKKEVVDLDQLRKLSWGGVPTNYRPTVWRLLLGYMPSKQDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVKLFQNERIHQCMERVLYIWSIRHPASGYVQGINDLMTPFLVVFLSAFVEEP-QTCDLSGVSDENLQIVEADSYWCLTKLLDDIQ 369          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: A0A397ZV74_BRACM (Rab-GAP TBC domain-containing protein n=3 Tax=Brassica TaxID=3705 RepID=A0A397ZV74_BRACM)

HSP 1 Score: 214 bits (544), Expect = 4.150e-61
Identity = 103/179 (57.54%), Postives = 135/179 (75.42%), Query Frame = 0
Query:  254 RFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            +F++VL +  V +++LR+L+WNGVP   R DVW+LL+GY P N  RR  VL RKR EY E+V Q++D+PD+ RS  E N+LRQI +D PRT PDV FF Q +VQ+++ERILY WAIRHPASGYVQGINDL+TP  V+FLS ++   VES  +S++    + +VEAD YWCLTKLLD +Q
Sbjct:  122 KFNKVLSDTTVILEKLRELAWNGVPHYMRPDVWRLLLGYAPPNSDRREAVLRRKRLEYLESVGQFYDLPDSERSDDEINMLRQIALDCPRTVPDVSFFQQAQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVIFLSEYLEGGVESWSMSELSSEKISDVEADCYWCLTKLLDGMQ 300          
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Match: UPI00053C5C27 (GTPase-activating protein GYP1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C5C27)

HSP 1 Score: 214 bits (544), Expect = 4.360e-61
Identity = 106/184 (57.61%), Postives = 136/184 (73.91%), Query Frame = 0
Query:  249 SYRDKRFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRRAVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSVESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ 432
            S R  +F++VL    V +++LR+L+WNGVP   R DVW+LL+GY P N  RR  VL RKR EY E V Q++D+PD+ RS  E N+LRQI VD PRT PDV FF Q+KVQ+++ERILY WAIRHPASGYVQGINDL+TP  V+FLS ++  SV+S  +S +    + +VEAD YWCL+KLLD +Q
Sbjct:  119 SARITKFNKVLSATSVILEKLRELAWNGVPHYMRPDVWRLLLGYAPPNSDRREAVLRRKRLEYLECVAQFYDIPDSERSNDEINMLRQIAVDCPRTVPDVCFFQQDKVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVIFLSEYLEGSVDSWSMSDLSTDKISDVEADCYWCLSKLLDGMQ 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2840.7751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR6_ECTSI4.210e-12068.59Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A0A7S1U894_9STRA2.800e-7461.62Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2S4T0_9STRA5.290e-6962.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836C8P8_9STRA9.770e-6659.60Rab-GTPase-TBC domain-containing protein n=1 Tax=T... [more]
V9EP87_PHYPR1.960e-6260.67Rab-GAP TBC domain-containing protein n=17 Tax=Phy... [more]
UPI00142E8F3F1.100e-6157.54TBC1 domain family member 22B-like isoform X1 n=2 ... [more]
A0A2P6QAN2_ROSCH2.120e-6158.15Putative Rab-GTPase-TBC domain-containing protein ... [more]
A0A3F2RUN4_9STRA2.780e-6160.11Rab-GAP TBC domain-containing protein n=3 Tax=Phyt... [more]
A0A397ZV74_BRACM4.150e-6157.54Rab-GAP TBC domain-containing protein n=3 Tax=Bras... [more]
UPI00053C5C274.360e-6157.61GTPase-activating protein GYP1 n=1 Tax=Tarenaya ha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 273..432
e-value: 4.4E-4
score: 7.3
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 281..430
e-value: 1.0E-24
score: 87.4
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 276..432
score: 21.866
NoneNo IPR availableGENE3D1.10.8.270coord: 308..432
e-value: 2.2E-11
score: 45.4
NoneNo IPR availableGENE3D1.10.10.750coord: 251..304
e-value: 4.0E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR22957:SF525coord: 235..432
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 235..432
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 259..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2840contigH-paniculata_contig2840:17063..19584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2840.7751.1mRNA_H-paniculata_contig2840.7751.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2840 17063..19584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2840.7751.1 ID=prot_H-paniculata_contig2840.7751.1|Name=mRNA_H-paniculata_contig2840.7751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=432bp
QPQQPPSSNNSNLDSFFKRLGQGQGSSRLWAGPGQRSGAAVPGSLRTRVH
SRTGSSSGSSTSAINTATAESRQGRMQQQQQQQQQQQQQQQQGSQASAVA
STAAGIRRQHTNGAGDLSLSPLGTTGGWSELEGTTRNGASGGGGGSGDGI
AFANYGRNLRDPLPSSPSPSPVPPSPPPPPPPPPRRSSTGEHLSPAAATR
TTAIEALPSAAAAAATLTRLPAPKPSSSPRPKGSESASMHSRELVSRPSY
RDKRFDEVLREEVVKIDQLRQLSWNGVPPIHRADVWQLLVGYMPANRGRR
AVVLERKRREYREAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPF
FHQEKVQRAMERILYIWAIRHPASGYVQGINDLMTPLYVVFLSAHVGPSV
ESTDVSKVDEVLLHEVEADVYWCLTKLLDNIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf