prot_H-paniculata_contig2833.7734.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2833.7734.1
Unique Nameprot_H-paniculata_contig2833.7734.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length140
Homology
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BLAST of mRNA_H-paniculata_contig2833.7734.1 vs. uniprot
Match: D7FWK1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK1_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.500e-41
Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 0 
Query:    1 MIEALQRPDCEVAMTMAVFPQELLTLVAWPEHLAPSFSSICVTHGAVARNMVAQDVIEVLLPNAPGASGGPVLSKRGEVVGILSQGSSTSAYVMGISTAKTILRAQPQYLERIY 114
            ++E L+  D +V MTM VFPQELLTLVA+PEH+AP FSSI VTHG VARNMV QDVIEVLL N PGASGGPV+ KRGEVVGILSQG+   AYVMGISTAKTIL A    LE I+
Sbjct: 2114 LLEVLKEEDNDVCMTMTVFPQELLTLVAFPEHIAPYFSSISVTHGPVARNMVGQDVIEVLLSNHPGASGGPVVDKRGEVVGILSQGNQFGAYVMGISTAKTILNASTPDLETIF 2227
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BLAST of mRNA_H-paniculata_contig2833.7734.1 vs. uniprot
Match: A0A6H5J7I8_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7I8_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.790e-41
Identity = 83/114 (72.81%), Postives = 91/114 (79.82%), Query Frame = 0 
Query:    1 MIEALQRPDCEVAMTMAVFPQELLTLVAWPEHLAPSFSSICVTHGAVARNMVAQDVIEVLLPNAPGASGGPVLSKRGEVVGILSQGSSTSAYVMGISTAKTILRAQPQYLERIY 114
            ++E L+  D +V MTM VFPQELLTLVA+PEH AP FSSI VTHG VARNMV QDVIEVLL N PGASGGPV+ KRGEVVGILSQG+   AYVMGISTAKTIL A    LE I+
Sbjct: 2139 LLEVLKEEDNDVCMTMTVFPQELLTLVAFPEHTAPYFSSISVTHGPVARNMVGQDVIEVLLSNHPGASGGPVVDKRGEVVGILSQGNQFGAYVMGISTAKTILNASTPDLETIF 2252
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2833.7734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWK1_ECTSI1.500e-4172.81LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5J7I8_9PHAE3.790e-4172.81Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.10.10coord: 15..111
e-value: 1.6E-9
score: 39.6
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 38..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2833contigH-paniculata_contig2833:9194..13578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2833.7734.1mRNA_H-paniculata_contig2833.7734.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2833 7437..14872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2833.7734.1 ID=prot_H-paniculata_contig2833.7734.1|Name=mRNA_H-paniculata_contig2833.7734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MIEALQRPDCEVAMTMAVFPQELLTLVAWPEHLAPSFSSICVTHGAVARN
MVAQDVIEVLLPNAPGASGGPVLSKRGEVVGILSQGSSTSAYVMGISTAK
TILRAQPQYLERIYDLASMSILFNAYGGGSSNNGCSGHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009003Peptidase_S1_PA