prot_H-paniculata_contig11208.767.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11208.767.1
Unique Nameprot_H-paniculata_contig11208.767.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.590e-25
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 0
Query:    5 VNAANRTLILDQLLSAKLAEVGLAAGSSKLQPCLKEMGATRIKQCITPSLSLTHRKNRVDFIMDQAATNLITFRSGFQTIHIGEAWFFLIRHRDRVRMFLGEERVGSTQVQHKSHIPKVMFICAVSRADPSRDFDGEIGI 144
            VN+ NR+  L Q+ S +L ++GL  G   ++    ++GA +    I PSLS   +++R+DFI D+    +  +      +H+ E+WF+L+R +++VR+F GE+  G  +V H+SH+PK+M I A +R DP+ DFDG+IGI
Sbjct:   77 VNSQNRSSTLRQV-SDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGI 215          
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.640e-7
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 0
Query:   27 LAAGSSKLQPCLKEMGATRIKQCITPSLSLTHRKNRVDFIMDQAATNLITFRSGFQTIHIGEAWFFLIRHRDRVRMFLGEERVGSTQVQHKSHIPKVMFICAVSRADPSRD------FDGEIGI 144
            L    S L   LK     R    + P+L+  ++  R+ F +    +N  TF+  + TIHI E WF+LIR      +   EE    T  + K+ IPKVMF+ AV+R  P  D      F G+IG+
Sbjct:  116 LKISKSTLHRLLKIGAILRHSSPLRPNLTFENKIARLRFCLKMLESNDSTFKGMYDTIHIDEKWFYLIRKSVNYYLLPDEEEPHRT-CKSKNFIPKVMFLAAVAR--PRFDTAGNVLFSGKIGV 236          
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.420e-7
Identity = 42/126 (33.33%), Postives = 61/126 (48.41%), Query Frame = 0
Query:   27 LAAGSSKLQPCLKEMGATRIKQCITPSLSLTHRKNRVDFIMDQAATNLI----TFRSGFQTIHIGEAWFFLIRHRDRVRMFLGEERVGSTQVQHKSHIPKVMFICAVSR----ADPSRDFDGEIGI 144
            LA  S+ LQ  +K          + P+LS      RV FI   +   LI    TF   +  +H+ E WFF+ + + RV +    E       +HKSHIPK+MF+CAV+R    +     FDG +G+
Sbjct:  150 LAIPSTTLQRYVKSKVLRVHTVTLKPTLSEDQNAERVRFI--SSFITLIPRGATFSPMYDRVHLDEKWFFMKKTKRRVYL-TPTEPTPYLHTRHKSHIPKIMFLCAVARPRINSCTGEVFDGRLGM 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.590e-2538.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1R3I5M9_9ROSI1.640e-733.87Uncharacterized protein n=1 Tax=Corchorus olitoriu... [more]
F0WV30_9STRA7.420e-733.33Transposase putative n=1 Tax=Albugo laibachii Nc14... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 31..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11208contigH-paniculata_contig11208:7580..8014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11208.767.1mRNA_H-paniculata_contig11208.767.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11208 6477..8398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11208.767.1 ID=prot_H-paniculata_contig11208.767.1|Name=mRNA_H-paniculata_contig11208.767.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
MIPRVNAANRTLILDQLLSAKLAEVGLAAGSSKLQPCLKEMGATRIKQCI
TPSLSLTHRKNRVDFIMDQAATNLITFRSGFQTIHIGEAWFFLIRHRDRV
RMFLGEERVGSTQVQHKSHIPKVMFICAVSRADPSRDFDGEIGI*
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