prot_H-paniculata_contig280.7654.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig280.7654.1
Unique Nameprot_H-paniculata_contig280.7654.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Match: D7FVB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB7_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.300e-19
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 0
Query:  109 GALRLAEGNADDAMAAAREQAEKLKEQXXXXXXEASSAEMAIGRNPATAAAEDAPEPT------EDMLPRKIISDNMKARLTRELESQGANPNKSAGNPILVVAAIVGLLVIVGGQG 219
            GALR+A+G+ D AM+AA E A++LKEQ       A+ +E  I   PA+  A++  E        EDM P++ IS++M+ RL +EL SQGA+PN+SAGNPILVVA I+ +LVIVGGQG
Sbjct:   26 GALRMADGDGD-AMSAAEETAKRLKEQAAALRESAAESEAEI--RPASDKADEVTETPVPAVRPEDMPPKQKISNDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQG 139          
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Match: A0A7S4D594_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D594_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 8.480e-9
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  167 EDMLPRKIISDNMKARLTRELESQGANPNKSAGNPILVVAAIVGLLVIVGGQG 219
            E+ LPR  IS  MK +L RELE+QGANPNK+A NPIL+++ ++ +LVI+ G G
Sbjct:   94 EEELPRVEISSAMKEKLRRELEAQGANPNKAAANPILIISGVIAVLVILAGGG 146          
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Match: A0A836CMY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY3_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.090e-8
Identity = 29/47 (61.70%), Postives = 42/47 (89.36%), Query Frame = 0
Query:  173 KIISDNMKARLTRELESQGANPNKSAGNPILVVAAIVGLLVIVGGQG 219
            K +S+ MKA+L +EL SQGA+PN+S+GN IL+VAA++G+LV++GGQG
Sbjct:  105 KELSEAMKAKLRKELISQGADPNRSSGNGILIVAAVIGVLVVLGGQG 151          
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Match: A0A7S2V2G0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G0_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.200e-8
Identity = 29/45 (64.44%), Postives = 39/45 (86.67%), Query Frame = 0
Query:  175 ISDNMKARLTRELESQGANPNKSAGNPILVVAAIVGLLVIVGGQG 219
            +S+NMK +L REL SQGA+PN+++GNPIL+V AI+ +LVI GGQG
Sbjct:  103 MSENMKNKLRRELISQGADPNRASGNPILIVGAIIAVLVIAGGQG 147          
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Match: A0A0G4H860_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H860_VITBC)

HSP 1 Score: 60.1 bits (144), Expect = 6.420e-8
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:  175 ISDNMKARLTRELESQGANPNKSAGNPILVVAAIVGLLVIVGGQG 219
            IS +MK RL RELE QGANPNKS GNP L++  I+  LVI+GG+G
Sbjct:  105 ISPDMKKRLLRELEGQGANPNKSRGNPYLIIFVIIAALVILGGKG 149          
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Match: W7TC08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC08_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.230e-6
Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 0
Query:  168 DMLPRKIISDNMKARLTRELESQGANPNKSAGNPILVVAAIVGLLVIVGGQG 219
            +M P   +SDNM+ +L  E   QGA+ N S GNPIL++A ++G+LV++GG+G
Sbjct:   79 EMPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKG 130          
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Match: A0A4D9CZL2_9STRA (Symplekin_C domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZL2_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 4.910e-5
Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0
Query:  175 ISDNMKARLTRELESQGANPNKSAGNPILVVAAIVGLLVIVGGQG 219
            +SDNM+ +L  E   QGA+ N S GNPIL++A ++G+LV++GG+G
Sbjct:  166 LSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKG 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig280.7654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVB7_ECTSI2.300e-1951.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4D594_HETAK8.480e-956.60Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CMY3_9STRA1.090e-861.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V2G0_9STRA1.200e-864.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4H860_VITBC6.420e-864.44Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TC08_9STRA4.230e-648.08Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CZL2_9STRA4.910e-551.11Symplekin_C domain-containing protein n=2 Tax=Nann... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 218..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..217
NoneNo IPR availableTMHMMTMhelixcoord: 198..217
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig280contigH-paniculata_contig280:22378..24688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig280.7654.1mRNA_H-paniculata_contig280.7654.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig280 22378..24688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig280.7654.1 ID=prot_H-paniculata_contig280.7654.1|Name=mRNA_H-paniculata_contig280.7654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
VVYCAQARLPFTLPYFGILVPTATGTKIHYTILGLLSFLGYIMLFLRGLA
FASLAAIGIGYVSAFVNNDLSHVSQHQGGSASASITARTTHIQQHQLQPP
LLRRQRSFGALRLAEGNADDAMAAAREQAEKLKEQAAALREEASSAEMAI
GRNPATAAAEDAPEPTEDMLPRKIISDNMKARLTRELESQGANPNKSAGN
PILVVAAIVGLLVIVGGQG
back to top