mRNA_H-paniculata_contig2792.7628.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2792.7628.1
Unique NamemRNA_H-paniculata_contig2792.7628.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: D8LIQ8_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ8_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 9.990e-128
Identity = 290/396 (73.23%), Postives = 314/396 (79.29%), Query Frame = 3
Query:  114 SACSNRISTGVSRSPRETVVSWQLPCGQQY-RALSYEFLSKPGGRFGGRGFGXXXXXXXGLDLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNASGVAASKSSSAHAALPPQPP 1298
            SA S+ +S G     ++    WQ    QQ  RALSY F    G  +GG G           D WP++H N+ VNVCPQG RMVVERLG+L +IE+PGWFIA+P+IDKIAYR+DMRERNI+I+PQAAITKDNVSVEVSGNLYVQF D EK            AAYGS+NPLYAVRQHAQSSMRASIGELELDEILHARA+LN MIK+TLQ AADAWGM VKRYEITEITPD QISEAMDKQAAAER+RRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       L+D  G DAA LQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVL+++G A    S A A   P PP
Sbjct:   48 SARSSLVSRGTGSWRQQQRQPWQNHQRQQQSRALSYRF--GVGQSWGGGGDVD--------DPWPVSHPNSFVNVCPQGSRMVVERLGKLSSIERPGWFIAIPVIDKIAYRVDMRERNISITPQAAITKDNVSVEVSGNLYVQFEDPEK------------AAYGSANPLYAVRQHAQSSMRASIGELELDEILHARAQLNSMIKDTLQSAADAWGMEVKRYEITEITPDAQISEAMDKQAAAERIRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDAAGSDAAQLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLSSAGAA----SKAAAGPEPGPP 417          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A6H5K1H4_9PHAE (PHB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H4_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 8.550e-127
Identity = 294/409 (71.88%), Postives = 316/409 (77.26%), Query Frame = 3
Query:  135 STGVSRSPRETVVSWQ-LPCGQQYRALSYEFLSKPGGRFGGRGFGXXXXXXXGLDLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYR--IDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVV---WNITI---------------QAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNASGVAASKSSSAHAALPPQPP 1298
            S G   S ++    W   P  QQ RALSY F    G   GG G           D WP++H N+ VNVCPQG RMVVERLG+L +IE+PGWFIA+P+IDKIAYR  +DMRERNI+ISPQAAITKDNVSVEVSGNLYVQF D EK         W+I                 +AAYGS+NPLYAVRQHAQSSMRASIGELELDEILHARA+LN MIK+TLQ AADAWGM VKRYEITEITPD QISEAMDKQAAAER+RRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AEAL+D  G DAA LQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVL+++G A    S A A   P PP
Sbjct:   25 SQGTGSSRQQQRQPWHNRPRQQQSRALSYRF--GVGQSLGGGGDVD--------DPWPVSHPNSFVNVCPQGSRMVVERLGKLSSIERPGWFIAIPVIDKIAYRKEVDMRERNISISPQAAITKDNVSVEVSGNLYVQFDDPEKTIDHASSRGWSIVPTGPITDGQSSLSTLPKAAYGSANPLYAVRQHAQSSMRASIGELELDEILHARAQLNSMIKDTLQSAADAWGMEVKRYEITEITPDAQISEAMDKQAAAERIRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEALRDTAGSDAAQLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLSSAGAA----SKAAAGPEPGPP 419          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A836C9D3_9STRA (PHB domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9D3_9STRA)

HSP 1 Score: 308 bits (788), Expect = 1.110e-97
Identity = 229/315 (72.70%), Postives = 259/315 (82.22%), Query Frame = 3
Query:  294 DLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNA 1238
            D WP+   NT++NVCPQG+RMVVERLG+L  +E  GWF A+P IDKIAY++DMRER IAI+PQ+AITKDNVSV+VSGNLYVQF DAEK            AAYGS+NPLY+VRQ AQSSMR+++GELELDEILHARA+LN MI   +Q AA AWG+ VKRYEITEITPD QISEAMD+QAAAERVRRERVLT        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EAL    G +AA L +AKQYI+MYG+MG+ SNTMLFS+RPADV+ L+AQA+ VLNA
Sbjct:   15 DQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEK------------AAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNA 317          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A7S0G971_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G971_9STRA)

HSP 1 Score: 286 bits (731), Expect = 2.630e-88
Identity = 202/374 (54.01%), Postives = 249/374 (66.58%), Query Frame = 3
Query:  129 RISTGVSRSPRETVVSWQLPCGQQYRALSYEFLSKPGGR--FGGRGFGXXXXXXXGLDL--WPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNA 1238
            R+ T V++ P   +++  +      RAL Y   +  G R  FGG            +D+  WPI   N ++NV P+G R VVERLG+LH I   G+F A+P  D+I+Y ID+RER I I PQAAITKDNVSV+VSGN+YVQF D EK            AAYG++NPLYAV QHAQS+MR++IGE+ELDEILH RARLN +IK ++Q AA AWG+ ++RYEITEI PD+ I E+MDKQAAAER RRE VL AEGEK+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX               +  VA  L+   G DAA L +A+ Y+ MYGEMG  SNTM+F+DRPAD+NAL+AQAS  ++A
Sbjct:    8 RVFTNVAKHPSTPILT-SMRGYSVTRALPYTMDNMGGSRSMFGGS------EGSSAIDIVRWPIRKRNNILNVVPEGQRFVVERLGKLHDICHSGYFFAIPFFDQISYVIDVRERAIDIQPQAAITKDNVSVQVSGNVYVQFVDPEK------------AAYGANNPLYAVTQHAQSAMRSAIGEMELDEILHGRARLNTLIKGSVQEAAVAWGLEIRRYEITEIRPDEMIRESMDKQAAAERTRRELVLQAEGEKRRAELTSEGVKIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLGIKMRAEAQAEAIAVVATQLQKAGGDDAAKLALARDYVTMYGEMGSKSNTMMFNDRPADLNALLAQASLAISA 362          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A812RC28_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RC28_SYMMI)

HSP 1 Score: 284 bits (726), Expect = 2.950e-88
Identity = 187/319 (58.62%), Postives = 226/319 (70.85%), Query Frame = 3
Query:  294 DLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGD---AALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNAS 1241
            ++WP +HANT++N+CP+G+ MVVERLG+LH I+  G+F+A+P+ID I + IDMRER++++ PQ+ ITKDNV V+VSGNLY QF D EK            AAYG+ NPLYAV+QHAQSSMRA+IGELELD+ILH R  LN  I+ T+Q AA  WGM +KRYEITE+ PD  I EAMDKQAAAER RR+ VL AEG     XXXXXXXXXXXXXXXXXXXXXXXX                              +  VAEALK  KGG    AA L IA++YI MY ++G+ SNTM+FSDRPADVNAL+AQA+AVL AS
Sbjct:    4 EIWPRSHANTVLNICPKGEVMVVERLGKLHNIQSGGYFLAIPVIDNIRFVIDMRERSLSVDPQSCITKDNVHVQVSGNLYCQFVDPEK------------AAYGAKNPLYAVKQHAQSSMRAAIGELELDQILHDRVHLNTSIRTTVQEAAVNWGMEIKRYEITEVMPDAHIVEAMDKQAAAERERRKAVLEAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALATKEKLILEAEGEARAIRERALAQSAAILQVAEALK--KGGHTDRAAHLNIAREYIAMYSDIGQKSNTMIFSDRPADVNALMAQAAAVLGAS 308          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A4D9CZF1_9STRA (PHB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZF1_9STRA)

HSP 1 Score: 285 bits (729), Expect = 9.330e-88
Identity = 217/317 (68.45%), Postives = 249/317 (78.55%), Query Frame = 3
Query:  294 DLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNASG 1244
            D+WP+   NT++NVCPQG+R VVER G+L  I++ GWF+A+P +D+IAYRIDMRER +AI+PQ AITKDNVSV+VSG LYVQF D              QAAYGS NPLYAVRQ AQS+MRA++GELELDEILHAR+RLN+MI+ ++Q A  AWGM VKRYEITEI PDK I+ AMDKQAAAER RRE V+ A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         + +G DAA LQ+AK+YI MYG MG  S+TMLFSDRP DVNAL AQA+  L A+G
Sbjct:   34 DVWPLGSTNTILNVCPQGERFVVERFGKLLDIKESGWFLAIPYVDRIAYRIDMRERAMAIAPQPAITKDNVSVDVSGILYVQFVDPA------------QAAYGSYNPLYAVRQCAQSAMRAALGELELDEILHARSRLNEMIRKSIQDACTAWGMEVKRYEITEIRPDKTITHAMDKQAAAERHRRELVIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAQGQDAAKLQVAKEYISMYGLMGSQSHTMLFSDRPGDVNALFAQAALALQAAG 338          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A7S3LBD5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBD5_9STRA)

HSP 1 Score: 281 bits (719), Expect = 3.450e-86
Identity = 214/329 (65.05%), Postives = 253/329 (76.90%), Query Frame = 3
Query:  300 WPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNASGVAASKSSSAHAALP 1286
            WP+T ANT++NV PQG + VVER G+LHA++  G F+ +PI+D IAY IDMRER + I PQ+AIT+DNVSVEVSGNL+V+F DAEK            AAYG+ NPLY+V QHAQS+MR++IGE+ELDEILH RARLN MI+ +LQ AA+ WG+ ++RYEITEITPD+QI  AMDKQAAAER RRE+VL AEG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       L    G  AA L +A++Y+ MYGEMGK SNT+LF+DRPADVNAL+ QA   +  +G     S +  A LP
Sbjct:   66 WPVTSANTVLNVVPQGHKYVVERFGKLHAVQDSGLFLGIPIVDNIAYVIDMRERALDIPPQSAITRDNVSVEVSGNLFVRFYDAEK------------AAYGALNPLYSVTQHAQSAMRSAIGEMELDEILHGRARLNSMIRGSLQEAAEPWGLEIRRYEITEITPDQQIRIAMDKQAAAERDRREQVLRAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELNKAGGEQAAQLALAREYVQMYGEMGKQSNTILFNDRPADVNALLVQAMTAMKVAGDNVHTSKAPQAVLP 382          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A7S2BBQ4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBQ4_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.540e-85
Identity = 189/365 (51.78%), Postives = 239/365 (65.48%), Query Frame = 3
Query:  156 PRETVVSWQLPCGQQYRALSYEFLSKPGGRFGGRGFGXXXXXXXGLDLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGD----AALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNA 1238
            P  TVV+ +   G  + ++            GGRG G       G  LWP +  NT + VCPQG+ MV+ER G+LH+++ PG F+A+P++D+IAYR+DMRE  I I+PQ+ ITKDNV+V VSG +YVQF D EK            AAYGS +P+YAV Q AQS+MRA+IGE+ELDEILHARA+LN +IK  +Q  A  WG+ V RYEITEITPDK ISEAMDKQAAAER+RR +VL AEG+K   XXXXXXXXXXXXXXXXXXXXXXXX                              ++ +A AL++    +    AA L +A+ Y+ MYGE+G +SNTMLF ++P D+NAL+AQASAVL A
Sbjct:    3 PSSTVVASRYMSGYTFDSMG-----------GGRGMG-------GHALWPRSGINTGICVCPQGEMMVIERFGKLHSVQPPGLFVAIPVVDRIAYRVDMRESAIEIAPQSTITKDNVTVAVSGCIYVQFVDPEK------------AAYGSKDPIYAVTQFAQSTMRAAIGEMELDEILHARAQLNTIIKGAVQEGATPWGLNVLRYEITEITPDKTISEAMDKQAAAERLRRVKVLGAEGDKXXXXXXXXXXXXXXXXXXXXXXXXXXXASKAEKIKRQLEADGDATAILVKAQAQAEAIKAIAAALEEGANPENATLAARLSLAQDYVKMYGEIGSTSNTMLFQEKPGDLNALLAQASAVLGA 337          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A1Z5JQI7_FISSO (PHB domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQI7_FISSO)

HSP 1 Score: 276 bits (705), Expect = 1.210e-84
Identity = 211/331 (63.75%), Postives = 257/331 (77.64%), Query Frame = 3
Query:  246 FGGRGFGXXXXXXXGLDLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNA 1238
            FGGR FG        +  WP+T  NT+ N+ PQG + VVERLG+LHAI   G+F A+P+ID+IAY +D+RER + I PQAAIT+DNVSVEVSGNL+++F D +K            AAYG+ NPLY+V QHAQS+MR++IGE+ELDEILH RARLN +IK +LQ AA+ WG+ ++RYEITEITPD+QI  AMDKQAAAER RRE+VL A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL+ ++  L    G +AA L +A+ Y+ MYGEMGK SNT+LF+DRPAD+N+L+AQA+  + A
Sbjct:   32 FGGRNFGGDS-----IGNWPVTKTNTVFNIVPQGHQYVVERLGKLHAIHDSGYFWAIPLIDRIAYVVDVRERALDIVPQAAITRDNVSVEVSGNLFLRFLDPQK------------AAYGAFNPLYSVTQHAQSAMRSAIGEMELDEILHGRARLNALIKGSLQEAAEPWGIEIRRYEITEITPDQQIRVAMDKQAAAERARREQVLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRKISAELLKPGGQEAAQLALARDYVAMYGEMGKQSNTILFNDRPADMNSLLAQAATAMKA 345          
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Match: A0A7S1ZWB3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWB3_TRICV)

HSP 1 Score: 276 bits (707), Expect = 4.670e-84
Identity = 229/392 (58.42%), Postives = 281/392 (71.68%), Query Frame = 3
Query:   90 LSSPVAQSSACSN-RISTGVSRSPRETVVSWQLPCGQQYRA---LSYEFLSKPGGRFGGRGF-----GXXXXXXXGLDLWPITHANTLVNVCPQGDRMVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDNVSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSMRASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDKQISEAMDKQAAAERVRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTVAEALKDVKGGDAALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNA 1238
            ++S  A ++A SN RI    SRSP   ++  +   G+ Y +   LSY F  + GG  GG  F     G        L  WPIT ANT++N+ PQG R VVER G+L AI   G+F A+P++D+IAY +D+RER I I PQAAIT+DNVSVEVSGNL+VQF D E+            AAYG+ NPLY+V QHAQS+MR++IGE+ELDEILH RA+LN +IK +LQ AA AWG+ V+RYEITEITPD+QI  AMDKQAAAER +RE+VL A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       L+  +G +AA L +A++Y+ MYGEMG  SNTM+F+DRPAD++AL+ Q +A + A
Sbjct:   36 VASRAAMAAAASNSRIINCSSRSPASLLL--KCAAGRSYSSSIPLSYNF-DRAGGGIGGGAFLGGPGGNDGTGMGELSRWPITKANTVLNIVPQGKRFVVERFGKLSAIHDSGYFFAIPLVDQIAYVVDVRERAIDILPQAAITRDNVSVEVSGNLFVQFIDPER------------AAYGARNPLYSVVQHAQSAMRSAIGEMELDEILHGRAKLNGLIKGSLQEAAVAWGLEVRRYEITEITPDEQIRIAMDKQAAAERDKREQVLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELEKDEGKEAANLSLAREYVAMYGEMGSKSNTMIFNDRPADMSALLVQVAAAMGA 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2792.7628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIQ8_ECTSI9.990e-12873.23PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K1H4_9PHAE8.550e-12771.88PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836C9D3_9STRA1.110e-9772.70PHB domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S0G971_9STRA2.630e-8854.01Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A812RC28_SYMMI2.950e-8858.62Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A4D9CZF1_9STRA9.330e-8868.45PHB domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S3LBD5_9STRA3.450e-8665.05Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2BBQ4_9STRA1.540e-8551.78Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1Z5JQI7_FISSO1.210e-8463.75PHB domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A7S1ZWB3_TRICV4.670e-8458.42Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2792contigH-paniculata_contig2792:7051..18344 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.8
Seed ortholog evalue4.4e-95
Seed eggNOG ortholog2880.D8LIQ8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.stress-induced mitochondrial fusion
EggNOG OGsCOG0330@1,KOG2620@2759
Ec32 ortholog descriptionBand 7 protein
Ec32 orthologEc-03_001140.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1618
Cds size963
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929844.5219069-UTR-H-paniculata_contig2792:7050..73941622929844.5219069-UTR-H-paniculata_contig2792:7050..7394Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2792 7051..7394 +
1691481036.164604-UTR-H-paniculata_contig2792:7050..73941691481036.164604-UTR-H-paniculata_contig2792:7050..7394Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2792 7051..7394 +
1622929844.561219-UTR-H-paniculata_contig2792:8342..83511622929844.561219-UTR-H-paniculata_contig2792:8342..8351Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2792 8343..8351 +
1691481036.1872077-UTR-H-paniculata_contig2792:8342..83511691481036.1872077-UTR-H-paniculata_contig2792:8342..8351Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2792 8343..8351 +
1622929844.7068002-UTR-H-paniculata_contig2792:18042..183441622929844.7068002-UTR-H-paniculata_contig2792:18042..18344Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2792 18043..18344 +
1691481036.2957747-UTR-H-paniculata_contig2792:18042..183441691481036.2957747-UTR-H-paniculata_contig2792:18042..18344Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2792 18043..18344 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929844.5734847-CDS-H-paniculata_contig2792:8351..84411622929844.5734847-CDS-H-paniculata_contig2792:8351..8441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 8352..8441 +
1691481036.1974847-CDS-H-paniculata_contig2792:8351..84411691481036.1974847-CDS-H-paniculata_contig2792:8351..8441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 8352..8441 +
1622929844.5884287-CDS-H-paniculata_contig2792:9277..93911622929844.5884287-CDS-H-paniculata_contig2792:9277..9391Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 9278..9391 +
1691481036.2096448-CDS-H-paniculata_contig2792:9277..93911691481036.2096448-CDS-H-paniculata_contig2792:9277..9391Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 9278..9391 +
1622929844.602449-CDS-H-paniculata_contig2792:10100..102431622929844.602449-CDS-H-paniculata_contig2792:10100..10243Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 10101..10243 +
1691481036.2315266-CDS-H-paniculata_contig2792:10100..102431691481036.2315266-CDS-H-paniculata_contig2792:10100..10243Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 10101..10243 +
1622929844.6222787-CDS-H-paniculata_contig2792:12589..127421622929844.6222787-CDS-H-paniculata_contig2792:12589..12742Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 12590..12742 +
1691481036.242637-CDS-H-paniculata_contig2792:12589..127421691481036.242637-CDS-H-paniculata_contig2792:12589..12742Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 12590..12742 +
1622929844.6397438-CDS-H-paniculata_contig2792:14718..148721622929844.6397438-CDS-H-paniculata_contig2792:14718..14872Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 14719..14872 +
1691481036.252432-CDS-H-paniculata_contig2792:14718..148721691481036.252432-CDS-H-paniculata_contig2792:14718..14872Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 14719..14872 +
1622929844.657913-CDS-H-paniculata_contig2792:15574..156821622929844.657913-CDS-H-paniculata_contig2792:15574..15682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 15575..15682 +
1691481036.2666256-CDS-H-paniculata_contig2792:15574..156821691481036.2666256-CDS-H-paniculata_contig2792:15574..15682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 15575..15682 +
1622929844.6757386-CDS-H-paniculata_contig2792:17014..171161622929844.6757386-CDS-H-paniculata_contig2792:17014..17116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 17015..17116 +
1691481036.274461-CDS-H-paniculata_contig2792:17014..171161691481036.274461-CDS-H-paniculata_contig2792:17014..17116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 17015..17116 +
1622929844.6913335-CDS-H-paniculata_contig2792:17943..180421622929844.6913335-CDS-H-paniculata_contig2792:17943..18042Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 17944..18042 +
1691481036.2838497-CDS-H-paniculata_contig2792:17943..180421691481036.2838497-CDS-H-paniculata_contig2792:17943..18042Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2792 17944..18042 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2792.7628.1prot_H-paniculata_contig2792.7628.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2792 8352..18042 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2792.7628.1

>prot_H-paniculata_contig2792.7628.1 ID=prot_H-paniculata_contig2792.7628.1|Name=mRNA_H-paniculata_contig2792.7628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=321bp
MVVERLGRLHAIEQPGWFIAVPIIDKIAYRIDMRERNIAISPQAAITKDN
VSVEVSGNLYVQFTDAEKLFFVVVWNITIQAAYGSSNPLYAVRQHAQSSM
RASIGELELDEILHARARLNDMIKNTLQIAADAWGMAVKRYEITEITPDK
QISEAMDKQAAAERVRRERVLTAEGEKKAYTLQSEGVKIQLINESEGHLI
QVQNQARANKDKIRLEAEGEAEARLVMAKAEAEALQTVAEALKDVKGGDA
ALLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLNASGVAA
SKSSSAHAALPPQPPPTAEQ*
back to top

mRNA from alignment at H-paniculata_contig2792:7051..18344+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2792.7628.1 ID=mRNA_H-paniculata_contig2792.7628.1|Name=mRNA_H-paniculata_contig2792.7628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11294bp|location=Sequence derived from alignment at H-paniculata_contig2792:7051..18344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTTATCACGCCGATTTTCCACAGGAGGAGCCCGAGTACTTATCAGATGT GCTGCGCCCGCCGGTGTCCTACCTTGCTACAGCCATAGGTTATCGTCCCC TGTTGCCCAGAGTAGCGCCTGCAGCAACAGAATAAGCACAGGTGTCTCGC GGTCGCCTAGGGAGACGGTGGTATCTTGGCAGCTACCGTGTGGGCAGCAA TACAGAGCGCTGTCATACGAATTTTTGAGTAAACCAGGAGGCCGATTCGG TGGAAGAGGTTTCGGTGGTGGAGGTGGTGGTAGTGGGGGTTTGGACCTTT GGCCAATTACCCACGCCAACACCTTGGTCAACGTGTGTCCGCAGGTATGT GTATTACTGTAGATAGATGATGAGCTACGAGTAGCTTTTGTGAGGGAATA ACGCATAACAGCACTGGCTGTTGAAAGACCCCACATGTTCAGAAGTCAGC GGGCAATGCAGTGCTGCTCGTTATAATTTCGGCTTTGAAGGTGCCGACAG CACTTATTTGTTCCCTCCCAGTAGCAAGGGTCGACCTGTCCTGATTCGAT GACCTGTATATTCCGTGTACTCTTTGTACAGTACATGTTTTTAGTTTGAT GTTTCGTTTACAGAAATATCATTCCGCTTCAGTCATCCCACCCCCAGCGG ACAGAGATGCCTACACGGGGCAAACGACCGTCCAAACGGCTAACTACCTT CCGACTTGCCCGATATGTGCTCTGAAAGAGCAATGTCAGACACAGAGGTT ACATGTATACCGCGGACAGCGCTGGTGGACAGATGACTTGTAGTTGGTAA TTACTCGCAAGGACGGGTACGGTTGGTGTTTGTCTGTGCGCCTCATTGTT AGGTTCTAGGAGTATCGGATTATCTCACCTTTTACCGACGTGGAACAAAA ACAAAAGTCAAGAGAGCCAGCCTGTAGATTGCGCCTTAAATAGAGAGAAG ATAGAGAGATTCCTCGGTGCTTGTTTTTCACGATTACGAGGCACCAAAAA GGTGTTGAGACCACTGCTTGAACCCGTCTAAACCACAACCCGCAATAGAG TTTGGTGCTGATATTTATGTGGGGCCCATGTTTTTCATTTTCAAATGTCG GCAATACATAGTTCCTGCCCGCGCCAGAAACTATTAAATAGTCTCATTCT CGGGAAAAATGTATGACTCACCTATCTGAACTTGAAACTGCAACAAGGAT ATGGCAACTCCCCAAAATGCACATATGTTTCAAAATGCCGGCCATGATCG GGATCATGATAGTACTTCGTTTTTGCCCTCCTCGTGTCCCAGGGGGACCG CATGGTGGTGGAGAGGCTAGGAAGGTTGCACGCTATCGAGCAACCAGGAT GGTTCATCGCTGTCCCCATCATCGACAAAATCGCGTACCGGGTAAGGCAC CCACTCGCCTTTCATTTAACAGTGGTTATACGCCAGTGACACTTGCCAAA AAACTCTTCTGTGTCGAGTGAATTTTGAAAAAAACATACTAGGATAGAGA CTGGAAGATATTCGGAGAAAATCGGCGTTATCATCATTATTTTGCTGACG AGCAAGGATATTGACCTATTTAGACAAATCAATGTATTCTATTTTTTTAT ACATATAAATTGGAAGAAGACCACCGGGTACCTCTCAATGAAGAGTTCAA TTCCAAACTGTGTTATGCATCATCCACAGCAGTGTTACAAGACACGGAAT AATTTTGGTTACCTTTTGTCAAATCATTTAGATTTCCATCATACAGTCAT ACAGCTCTTGAGTCCGAGCGCTGCAATCCTTTGACTGCGGGTCCGTGCAC TGGGAATGGTGTGTGATAACAAACAACGCAAGGCCACGACACAGGATGAA TTTCTTACAGTTACCTAAAAGGTTAGCGGCAAGCTAAAGAACAACGATAT GTGGTGTACCGCGCAGCCGGAGGGGTTCATGATCACGTCTGGCCGCTCTA AAAAGTAGCACTCTCGGACTGTACAATACCTGTTCAATTGTCCATTAGCG CGAGTAACGAGTCCTCGAAATACTAGATGTTCTGTTGTATTGCACCGACA GTATCGAGTTCGCAGAGTACTCGAGAGTATCCATCGACACCTCAAAATGT TGTACTTGCTACCTGAACGGAATTTGCTGGTTTGGACTTGAAGGCCTAAC GGGTATGTCACGCGTGCTATCCGGACCATAATCGATATGTTTTTCGTTCT TTGGCTTTAATAATATCCGTGATGCAGATCGATATGCGAGAGCGTAACAT CGCAATCTCACCCCAGGCAGCCATCACCAAGGACAACGTAAGCGTGGAAG TGAGCGGGAACTTGTACGTACAGTTCACTGACGCGGAAAAGGTATGTATT GGTCGATTCACCTCAAACGCATCTCCCAACGTTTCAAGTTCTTCATTTGT GGATATGCGATCATGCGCGTCTCAAAATCTACTCCGAACTCATCGTAGTA TTTCGTTGCTATAGACTTGGCATTGTTTTGCTGTAGATTGCAACTTGAAT CCTAACAATAACAAGCCAGGCCTTTCAACAACAGACACTGAACGCTTGCA CATGCCGTTCACGGGAAGAGTAGCAAAATTATTTTATTTACTCCCCTCCC TCCTATACACCATAAGGTAATGACTGAAGGGAGAGAAAGAAAGCGCTGTG CTGCAAGATTTCCGCTATTAAGTTCGGGTTAGATTTTGCTTTCGGGAGTA TGACTTATGGTTGGAGTGTCTTATATTTCTCCCCCTTGCCTCTACGCTTG CTTTCAGGTGGTTTTCTGATGATATTCTATCTATATTTCCCAACGCTCGA CGTGATCCATTTGGGGTGCATTTTTTATGGCTGAATAAATGATTTTCACC TAAGAAATTGGTATGTACGATTGCTCTTATAACAAATAGCTTGGGATACT TGCCGTATGAAGTAGTAATCATACGTGTTTATCAAATGAAGAGTGTGCAC CCTATGGTAGATTTGGATAATAACACAAAGGGATCATTACATGACCTCCC TCTGTGTTATTGTGTTTTACTTTCATAAACTGTGCTCCATGTCTCGAAAG CTTTTCTTTGTTGTGGTGTGGAACATAACAATACAGGCTGCGTATGGGTC TTCCAATCCGTTGTATGCGGTGCGACAGCACGCTCAGTCGAGCATGCGAG CGTCTATTGGAGAGCTCGAGCTGGATGAGATTCTTCACGCACGGTAGGTC GTAAGGACACACCGTTTCAATGCTGCAGCAATTCTAGGTGTCAGGCGACT GGACAAGGCTCAGCAAACGAAATAGACGAAGTACAAGGTGTAACCCGTGT TTGATGTTTCATTTCTGTTCAATTTTTTATTCATGGGTTGTCACAGTAGC GTTTTTTTGTTGTTTTTCCTATTTTTTTGTGCATGTTTTTGATGTTCTAG ACTTGAATGGAGAAAGGGGAACCCTTACGGATGAACGCGGTAAGGTCTGA GGTGATCATTGTCTTTGTAGCTTCGGTTTTTTTTTTTTAATCTGTGATAA GGTAAGTCCTAAAAAATGAATCTTCATGTGAGCGTAGCGAACCACGGCGA GTCCGTGCGTCGGGGGCAAGCAAGAACTGCATAGGACTAGCCGTGGTTCG AACTGCTAGTACCCAGTAAGCAGGACAGTATATTGTGAAGGCTTATTAAA ATCGCACCTGCATATCACTTACTCGATACAAAAAACTGATACTGAAAAAT ACATATAATGACCATTGTATGCGATTTGGAGTGCCTCGTTCGGACGGCAA GCAGTAGACCAGGCCGGCTTCGGTACCGATGAGCCCGATTCAAACATGAG AAGGTTGAAGGCCCATTCACTACAGGAGTACAAACTATACCCCCCCCCCC TGTTTTGTTTGATTTGTGGTCAGCCAGAGCAAGTAGTAAGTCAGACAGGT TTGAGTGCTGTTCATAATAGTTGGATATGTGGTGGTAGACCCAGTGAACT AGAAAAGTGCTAATCTTAACCCCCGCGCGGAAAGCGTATGGGTGGTAATT CTCGGCGTCGCAAGAGCGGTATCAACGTATCAATGTACCAACGGGACCGT GTTGTGACCAAAATCTTTGTGTGGACTGTGGTTGCCTGTTACGGTTAGCT ACTCTTGTTTCGTAGCTTAGCTTCATTTGTACGTACGAATAGTTGTGCGG CTGTCGTATCTATCGATTGCCGTGACCCACAACTGCGCCAAGAAATGAGC TAAAACCATTGCTTTTTCTAGTTAGGTATCCCGTCTTGAACACATATTTT GAAAATTAAGATTCAAGTAAGTCGTTTTTCGTACTATGAACGAACCAGGA TTGCCGGTTACCCTTGATTTATTCTGTCCGTTTTCACAGGAAATCATGAA TCAAAGTTTGCTCATTTGTGGTTCTCACTCGTTTATTTGGTCGTTCACAT GGAGCTGCATGACGTTCCTTTGTCCCGCTGTATCAATGTATTACTACGGC TGCAGCCACGGCTACTCCTCTAATCCGTACAGTCCGTGCGTTGTCCTTGA CTCACAAACAACGGCTCGCTGCACTCGCAAACGTTATTTTTCAATACTAA CTGGAGTACAGAGCTGAATATCTGCTCCGAAACGACGACGATGACATTAC TGTATTCTAGTGTTCAATAATGGACAAAAAAGGGTACGCCCACCCTGAAA ATGGCAGAATAGGTTACAATGGCCTGCGCGCTTGGAGAGAGGCTGGTGAC CATGGGTGTGGTCGTTCTCTCCCCTAGACATGACCATGTCACGTCCACAG TACCCATTTTTGCACATGAGCGGACCTTGGAAAACGACAACATACATTTT TTTGACGTGTACACTCTCAACTGTAAACTGCAGACCGTACAATCAGTACA ACTGTGCAGTAGTACACTTTGAAAAGTGCTAGTACTGTATGTATGCCTGT ACACTACCTGTAGTCACAGGCAGCACGACTCATAGTGCTAGCCAGTACAG CGTGACCTGTCCTTGGAGCCAGGAACGTTCTGTTGTGGGCGAGAGGAGCG AACCTGGGTGTGCCTTGATCCTCCTGTGGATGGATCAAGGCCGCACGACT ACTGCGGGTAGTGTCTTGTCAGACATGACCGAATACGGACCCAGGGCAGG TCACCCCGATTGTTGGTCGGCTCAGCTGTTCGGTTTTTAGCTGCGTTTAA ACGTTCAAACGAGGGTACTAACCACTCTTTGGAGTGGCTGCTGAGTCAAT CGTCTCTGGACAAGTATGGGTGACCTGCAGACTGAATGGGGTACAAAATT GGACGAAAAGGGGGGTAAACGACAAACAAATGAGGCATCGCCCAATCGCG GTAAAGGCAGCGCGATACACCGCTCCCAAAACGTCGACAAAAAGGGGTAT ATGGCCCCTCCAAGTAGAAGGTCACTTTTGCAATCACCAGTTCCTGTGTT GTCGATGCTTCTTTCGATGGATGAATGATTGGTGGTGCACCCCACTGGCT TTGCGCGTCGAGTAGAGCAAAAACAACAGCACAAAGGCTTGCATAGCTCA TTTACCACCCACTCTCCGCGTACTTTGCTTCCAATCCAGGGCTAGGCTGA ACGATATGATTAAGAACACGCTGCAGATAGCCGCGGACGCGTGGGGTATG GCGGTGAAGAGATACGAGATCACGGAAATCACGCCAGACAAGCAGATTAG TGAGGCAATGGACAAACAAGCGGCGGCTGAACGTGTGCGAAGGTGTGTGG GGAAGGAAGGGCAAGAGGTCGTGTACCGTAATGGGGAGGGAGCGCACGGG GAGGGTGAAAAACCCGAAAATGGTTCAATTTTTTACGTAAGTATTGATTT TTTCAAGTGTTTTTTGTGTACTGGACGGGCCGGCCAAAATCCAGAAATTG TCTTGTCTTGAGGGCGTACTACCTGCCACTAAAAATGTTTTCAAGGGTGC CCTTTGATATACTAGTAGTCAATCGAACCATTGCAACGCCGGCGCAGTAC GTATTTAATCCTCGCCGACACACACGCAGGCGTACTCGCTACGCTTACAT GCGGATAGTTCACCCCCCTCACGAATACCATTGCCCGGAGCATTCACGAC GAAAAATGTATTTCGCCGGAAAGTTGAAAATGTGCGAGCATACAGATGAA GTGTGTCATGCTCTGTTTTTTTAGTTGTTGTATTGCTATTATTCGGAGCA GTCCTAAATGATCCGAGGGTCTTCATTGTTCATGCTGAGCCCTCAGACGA ATATTTGGGGGGAGGGGGTCGGGAAGGTGGTCGCGAATATGCCCGAAATA TCCATATAGTAATCATATCCATCTCATGTGGTGAAACAATTCACCCCCCC CCTCCCCCGGGTAAAAGGAATACTTGCAAATGGATTTAATAAAAAACTGG AAGTATTCACCTGAGTTTCAGAATGAACGAACGGACAGATGAAATAAACT ACTCACCCCTGTCCATTCGTTTTATGAGTTTCATTAGCAGTCGTGGATGA TGGTCCGGGGCACATGTAACACACGAGCTCATTCTGAAACTCAGGCGAAT ACTTTCAGCTTTTTATAGAAACCATTTGCATGTATTTGTAGTTGTTCGGG GGAGTGAAACAATTTCAGCAACCTTTTTTTTTTTTTCTGCTTTTCAACAT GTTCATGCTTGTGTCGTTTCAGGTAAAACATAAAGCGCTCTCAGCCCGAT TATTAGGTACATTCGAAATCGGCGCACTATGGAAAAATACGTTTCCAGCA TTCAATCCTACATTACGCTGGATGTTTTAAAAATGAGTTGGTGCACCTCC CCCCGAAATCGCCTCCCAATACAACCGGGAGTGATCGGGAGAGCTCGATC GCCGGATCAATTCTCTGGAAGACCTTCTCTGCAAGACCTTCTTATTTGTC TGTTGAGCGTGTCTAGCCGTTGAAGGTATTGTCAAGGCATTAAAAGAGAA ACGATTTGACTAAGGGCGAAGAGTAATGGTAATCGATGAGTTCCTCAAGT GTAGCAAAACTGGGGTATTGGTCTTGCGGCGATTTTAGAAACGTCAAGTT CGCAGTCATGTACGAGTCGAACGGGCGGACAGTTGCTGCAACGTGGAGAA TAACAAGGAGAACGAGACACCTGACGGGAGTATGACTAATAAATGGGGAG TAGAAAGATCGTTGTCCCAACATTTGCCCCGAAATCGCCGTAAATACGGT TATTCGCCTCAAGTCAAAGGGATTTTATCAGATAAGAAAAATGTTGAAAC TGCTAGGTTTGTGCCGAAGATAATTTTAGATCGACTACCCGCAGATTTGA ACGGAAAATGGTATATCGAAGGGATGATGGTGTGGAGTATGACCGTCTGT GATTGTTAAGCCCGAAAGTTAATCAAACTTAACGGAACAAGGAGAAACGT TCTTCGATCGTAGTTCGTGTCTATTGAGCCTGATTTTTTCGTACCAAGAT TCAACGCCGATACAGAGTAATGCTCGATAAAACCGGAAAAACCAGTCCGA GAACATTTGACCTGTCGGTACTACACTGTATATATATACATACTATATTT TGTCTTTTGTCATTTTCCGGAAAGCGAGTTATCCCTGCTGAAGGTAAAAA AGATCGCTTTCCCCAAATAAAAAGCTATGCTCACAAAATAGCTCGGAAAT ACCAAGGATTGATATTTTGGTATCTCGTTGACCTTTGTGTGTGCATACAT ATATTGTCGTTTTTCCAGGGAGCGAGTCCTTACTGCCGAGGGTGAAAAAA AGGCGTACACTCTTCAGTCAGAGGGCGTGAAGATTCAGCTCATCAACGAA TCAGAGGGACACTTGATTCAGGTTCAGAATCAGGCTCGGGCAAATAAGGA CAAGATTAGGCTGGAAGCAGAGGTTTGTGACTGGATTATGACAAAGTAGC TGAACAACACGAACATGAACTGTGTGGTTTTTATGTGTACAAGAAGATAT TCAGTCAGCCACTCGTTTGTTGACCTTTCTGACTGTGCGACGCGTTGTGG ATATCTGACTGCAGTGCCAACCAAATTGCATTTTTTTGTTGGTTTAAATG AAGAAAGATGGTGGCCCTATGGTGGAAATTCTTGAGACACTGGTAGCTCT CCTCCCCCCCCTCCGTTGCAGTCGAAGCGTTACAAGGAGGCACCAAGCAA TTGCGATAGAGTCGTAACTTTAGGTAGGTCATGTTACACACCCACATGTA TATCTCCTTTGGAAAAAACCGTTGCGACAAATAGACGACAATAAGGCGAG CTTGTAAGTCGTTTCATGTGTAGTAATGGAACCGCGAAGTACGGCCGTGC AGTTCATGTTGGCTTGTCCTCGACCTGCTGACCCACTGCACTCGCATTGG CGGCTCATTTAGCGAGCAACACTGCTCGCCGCGCTCGCCTGGAGATTTGT GTTTCCCAGGTGTTACCCGAGTATGGACTAGGGAAGCTGTTGCAAAACGA CGACCTCCTTGCCAATGCCGTATTGAGAAATGAGGATTATGGTGTCTCCC TACCCGTTCCGGACGTTGACTGTGGAATTGTGTCATTGTTATGTGTTGAC ATGCCATGAATTGTTGTTATCCAGGGAGAGGCAGAAGCTCGCCTCGTAAT GGCCAAGGCCGAGGCAGAAGCGCTGCAAACGGTCGCCGAGGCATTGAAAG ATGTTAAAGGAGGGGATGCTGCATTACTGCAGGTGACTTGGTGTGGTACT GGAACACAAATTATTTTTTTTTTACCGAAAAAGTGAAATTTAATTGCGAT ACGTGATGATTTTTGTTCAATACCCGTAGCTATAAGAAAAGCTATATATA TATACTGGTATTGTTCTTTTACAAAATGTTGATAAATTTGCTATTTTTGA AGTTGAAAGTGAAAGTAAACCGTTTTTTAGGGGTGGGTTCTTCGACAATA AATGGTGTTACATATCCCTACACCTTGGATGAAGGAGGGTCGATAAAGGT CGTGGCGGATACTCTACTGTCCGGTGCACCGATTGCAATTACGGCCCTTC GCATGTTGTCGGTGTGCTCAATTTTAGACTTGAAAAGCACCTTGACACAA TTTTTTACTCTTGTAAGCGTCATGTTCAAGGTTGTATGAAGTCTAAATGT TTTCTCAAGGTGTTTTACTTGCAAACGTCATCCCTGTGTGGGAGGGAACC TCAGCCCTCCTGCTGCAGCAAGGGCCTTCTAAGCACCATAGATAATAAAG TCACTTCCAGTGGGAAACATCTATCGATAATTTTGTTTTGCTCAAGGTTA GGTGATCACTGTGTGATCGTGACGATATTTGCGGTAGCCAATATTCACTT CACTGTGGTAGATTAACGCGCACGGAAATTCGTTTTTTAACACCACAGTA ACTAGGGCGCCAGGAAATATACCGTGGTGATTTTGTGTCGGTGGAAGGTG TATGTCGTGGCATTTTGTTTTTCAAATGCAATATTTTCAACGACACTCTT GTGCGCGTTTATATTATAAGTCCTCCACGGTATTCGGCAATTTTACCGGG AGGGCCACTGCAATTTTGTGAAGTGTTCGTCGGAGGGGACACCTTTTCTT TTGGCGCCTGTTCAGATCTGTCAAATGTGCGTTACGATACAGGCTCTATC CCCGCTTGTTCTTTTTTATTTTGTTTGAATGATCGATTTTTCAGCACACG GGGTGCTGCTGTTTGATGTTAGCTGTCATGAGATGTGTTCCGGCTTCTCT GATTATTCATTAGTGCCCATTCAAGTTGTTTTTCTGTCACCGGGGTATAC TCAAAAGCTCCATTCAACTACTAGTAATGGTAATTGCATAGAACGCTGAG CTTTTGCAGGATGATGTAAACACCAAACGAACTTGGACGATCTTTTGAGT GCGTACAGTCCTACCGATACAGTGGTTTGCTTTTGTTATTTAGTCATCAG GGTTGAATTTGTTTGCAGCGATTTCGTGTTGACAGTCCCAAGTAATGTAC AGCTTTGCTTACCAACCCTCCCCCCCCCCCCCACCGCTCTTGCCCCTTAT TATCCTGTTCCCAGATTGCAAAACAGTACATCGACATGTACGGAGAGATG GGGAAGTCCTCGAATACTATGTTGTTCAGCGATCGACCAGCAGACGTGAA CGCTCTAATCGCACAGGCAAGTAGTGAAAACTAGCACATGTACCTCCCCT TCGGTTAACTGTGCCTCCTCTTCTGTGATAAAGATAGATGCGTTTGTCAT CTTGGTGTATGGATTATGTCCCAAATGCTGTGGGAAAATCCTGTATCTCC CGTCGTGCTTTTCGGCAGTCGCTGATACTACGGTTATTCGTTTTTGGTTT TAATGGGGGGGTTTGCCTTAACATTGATCCACCGCTGAGTTCTTTTCCCC TCGTGAATCCGGTCGGGAACCCGGTATGGTATCCAACGTCTATTGTTGAG GATAGCTCTTGTGGTGTTTCGCAGTGAGTAGATTTTAATAGATGGCTGTG TGTCTCACCAATAGAAAGATGATAACACTTTTAGCCTCACGTAATCTCAA TCTCGCGATGCAGGTCTGTCTCCCCGATTTTTGTGTTTCATCGTGACGGA TTCGGAATGAAAATGTCTCAAATTTACCATGGTTTACGTAGTTTGCGGTA CGTACATGATTCTGAGGAATTTTCATTTCAGGGTTTAATTTTGTTGTGAA GGAAACCGTGCACTGTCGAAAGAGTATGGGTATATGCATACATTTTTTGA CGAGGTCTTTGCCAAGCGCTAAAGTTGCGATCCGCGGGCATATTCATTCT CAACAGGATCAGGTTTGAAGAGTATTGATGACAGGAGAGCTAATCTATCC ATACTGTTTCCGTTCGCTATGTTTTCAGCAGGAGTGGTCTTGACTGCCGT GATCCGTTGTGCGTTTTCGAGCTTCAATATTTCGATTTCACTTTACGAAT AATAATCCATCTTGCCATGCTGCCCACCCCTCATATATGGCAGGCCTCTG CAGTTCTTAACGCCTCTGGTGTAGCGGCATCCAAATCCTCGAGCGCGCAC GCAGCGCTACCGCCGCAGCCGCCGCCAACAGCGGAGCAGTAGTGATAGCC CTCCGCGTTTTGACTTTTCCTTGTTTTTCTGTCTTACTGTGTGAGCCTCT TGGCGGCAACAGTTATTTTAGCAGCAGCTAGAAGAACTGCTTGCGTCTCT TGGTTTGTTTTGGTTGATGAATCAGTTCCCAGTTTCTAGGGGTTTTGGCT TCATCATTGGTGGGTTCCTGGGGCATGCTCGTGCTCTTGCCTGTGTTTTG TTGTTAGATTATCCAATTCCAGGGTTTGGGCCGGGGATCTTGCCCATTCT TGATATCCATCGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2792:7051..18344+

>mRNA_H-paniculata_contig2792.7628.1 ID=mRNA_H-paniculata_contig2792.7628.1|Name=mRNA_H-paniculata_contig2792.7628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1926bp|location=Sequence derived from alignment at H-paniculata_contig2792:7051..18344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGGTGGAGAGGCTAGGAAGGTTGCACGCTATCGAGCAACCAGGATG
GTTCATCGCTGTCCCCATCATCGACAAAATCGCGTACCGGATGGTGGTGG
AGAGGCTAGGAAGGTTGCACGCTATCGAGCAACCAGGATGGTTCATCGCT
GTCCCCATCATCGACAAAATCGCGTACCGGATCGATATGCGAGAGCGTAA
CATCGCAATCTCACCCCAGGCAGCCATCACCAAGGACAACGTAAGCGTGG
AAGTGAGCGGGAACTTGTACGTACAGTTCACTGACGCGGAAAAGATCGAT
ATGCGAGAGCGTAACATCGCAATCTCACCCCAGGCAGCCATCACCAAGGA
CAACGTAAGCGTGGAAGTGAGCGGGAACTTGTACGTACAGTTCACTGACG
CGGAAAAGCTTTTCTTTGTTGTGGTGTGGAACATAACAATACAGGCTGCG
TATGGGTCTTCCAATCCGTTGTATGCGGTGCGACAGCACGCTCAGTCGAG
CATGCGAGCGTCTATTGGAGAGCTCGAGCTGGATGAGATTCTTCACGCAC
GCTTTTCTTTGTTGTGGTGTGGAACATAACAATACAGGCTGCGTATGGGT
CTTCCAATCCGTTGTATGCGGTGCGACAGCACGCTCAGTCGAGCATGCGA
GCGTCTATTGGAGAGCTCGAGCTGGATGAGATTCTTCACGCACGGGCTAG
GCTGAACGATATGATTAAGAACACGCTGCAGATAGCCGCGGACGCGTGGG
GTATGGCGGTGAAGAGATACGAGATCACGGAAATCACGCCAGACAAGCAG
ATTAGTGAGGCAATGGACAAACAAGCGGCGGCTGAACGTGTGCGAAGGGC
TAGGCTGAACGATATGATTAAGAACACGCTGCAGATAGCCGCGGACGCGT
GGGGTATGGCGGTGAAGAGATACGAGATCACGGAAATCACGCCAGACAAG
CAGATTAGTGAGGCAATGGACAAACAAGCGGCGGCTGAACGTGTGCGAAG
GGAGCGAGTCCTTACTGCCGAGGGTGAAAAAAAGGCGTACACTCTTCAGT
CAGAGGGCGTGAAGATTCAGCTCATCAACGAATCAGAGGGACACTTGATT
CAGGTTCAGAATCAGGCTCGGGCAAATAAGGACAAGATTAGGCTGGAAGC
AGAGGGAGCGAGTCCTTACTGCCGAGGGTGAAAAAAAGGCGTACACTCTT
CAGTCAGAGGGCGTGAAGATTCAGCTCATCAACGAATCAGAGGGACACTT
GATTCAGGTTCAGAATCAGGCTCGGGCAAATAAGGACAAGATTAGGCTGG
AAGCAGAGGGAGAGGCAGAAGCTCGCCTCGTAATGGCCAAGGCCGAGGCA
GAAGCGCTGCAAACGGTCGCCGAGGCATTGAAAGATGTTAAAGGAGGGGA
TGCTGCATTACTGCAGGGAGAGGCAGAAGCTCGCCTCGTAATGGCCAAGG
CCGAGGCAGAAGCGCTGCAAACGGTCGCCGAGGCATTGAAAGATGTTAAA
GGAGGGGATGCTGCATTACTGCAGATTGCAAAACAGTACATCGACATGTA
CGGAGAGATGGGGAAGTCCTCGAATACTATGTTGTTCAGCGATCGACCAG
CAGACGTGAACGCTCTAATCGCACAGATTGCAAAACAGTACATCGACATG
TACGGAGAGATGGGGAAGTCCTCGAATACTATGTTGTTCAGCGATCGACC
AGCAGACGTGAACGCTCTAATCGCACAGGCCTCTGCAGTTCTTAACGCCT
CTGGTGTAGCGGCATCCAAATCCTCGAGCGCGCACGCAGCGCTACCGCCG
CAGCCGCCGCCAACAGCGGAGCAGTAGGCCTCTGCAGTTCTTAACGCCTC
TGGTGTAGCGGCATCCAAATCCTCGAGCGCGCACGCAGCGCTACCGCCGC
AGCCGCCGCCAACAGCGGAGCAGTAG
back to top