prot_H-paniculata_contig2751.7533.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2751.7533.1
Unique Nameprot_H-paniculata_contig2751.7533.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length604
Homology
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 3.350e-88
Identity = 299/698 (42.84%), Postives = 367/698 (52.58%), Query Frame = 0
Query:    5 HLVKVKLDGDLRIMEIPSPPLFDALVRATAEAYALQG--TEGFIYTYQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXL------------RSREQQKSLATAPASMTLDHDVPSTEDYAIASGVSSVASVKD--DLMDVNLEADASS---DPTKSEENEIEIDGP--------AAFEVEAAAARDPEGSKLFQKGSIRLAKRYGVHLTPTQLWRVMTLFQIQGRQLVILGLAPGRALRGSAGGASSADMSASSEDDTCDNRDMRRGAKGVYVCGQRALVTSPVQRLLQLHGVEMAEDEVGPMLQALRVRPFRMIRLGLLSKHEVAEL-------------FAQEGRSVGGLGGAPFGHSLGRXXXXXXXXXXXXX------------PPLAHHRHLP--------------HHPMRGPPGXXXXXHPPMFGMPPHCILPMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSHAWNEDESGHGRRGGGFRHMHEFAAGCG--------------------------------GGGRGCHGRGGKKSMNMARFVEHRSPSPGNDVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAVVGAVAPGEEAEVSVDLIAPLQAGMYDGFWRTFGEG-RRFGQRLWAKVLVVRPGDDVGAHVGEDMNAGVKKLSLDD 603
            HLVK+KLDGDLRIMEIP+PP FD LV+   +AY++     +   +TY+D                                          RS    ++ + AP S      +PST  YA+AS V S     D  D++ V++  +A++    P+    +  + DGP        AAFE EAAAARDPEGS L+QK S+RLAKR+ VHLTPTQLWRVM LFQIQGRQLV+ GLAP R+L  +A  AS  D+ +S E+   +     RG K         +V   VQRLL L+GVE+ EDEV P+LQALRVR  R++RLGLL    + ++                 G  + G G  P G   GR XXXXXXX    X            PP  HH+                 H        XXXXX                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       D   HG  G  F      A G G                                G  +   G+G K +M MARFV H S   G+DVT+V AGQ F+KSWLVRNDS+T WPE  SL+PVS+ C  LSSP EA +VG V+PGEE  VSVDL+AP Q GMY+G+WR   +  R+FGQRLWAKV+VV P        GE++NA V++LSL++
Sbjct:    3 HLVKIKLDGDLRIMEIPNPPRFDELVKTVMDAYSMPAGVEQQLTFTYKDNDGDEVRFDTNAELDLAIRTSSVPLRIMVANPPXXXXXXXXSRSTPNPEATSAAPPS------IPSTPGYAVASNVGSAVGGGDEPDMIMVDMPGEAAAAAAGPSGGSVDGSQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKASMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDAAAAAAS--DLDSSDEEGGENKPSAVRGLKRSKSQVAGTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDAKGPRGGPPGHPMHGHGHGPGGRFAGRGXXXXXXXPPFGXXXXXXLMMPFHWPPPFHHQXXXXSGXXXXXVAEGATHRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWQHGPPGYDFAGGFPGAPGAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAKRGFGKGTKDNMAMARFVSHTS---GSDVTKVAAGQAFKKSWLVRNDSTTTWPETCSLIPVSQSCTDLSSPPEAPIVGDVSPGEEVTVSVDLVAPPQPGMYEGYWRACDDASRKFGQRLWAKVMVVGP--------GEEVNAAVERLSLEE 681          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: D8LFK8_ECTSI (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK8_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 6.670e-47
Identity = 89/147 (60.54%), Postives = 110/147 (74.83%), Query Frame = 0
Query:  458 GRGGKKSMNMARFVEHRSPSPGNDVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAVVGAVAPGEEAEVSVDLIAPLQAGMYDGFWRTFGEG-RRFGQRLWAKVLVVRPGDDVGAHVGEDMNAGVKKLSLDD 603
            G+G K +M MARFV H S   G+DVT+V AGQ F+KSWLVRNDS+T WPE  SL+PVS+ C  LSSP EA +VG V+PGEEA VSVDL+AP Q GMY+G+WR   +  RRFGQRLWAKV+VV P        GE++NA V++LSL++
Sbjct:   73 GKGTKDNMAMARFVSHTS---GSDVTKVAAGQAFKKSWLVRNDSTTTWPETCSLIPVSQSCTDLSSPPEAPIVGDVSPGEEATVSVDLVAPPQPGMYEGYWRACDDASRRFGQRLWAKVMVVGP--------GEEVNAAVERLSLEE 208          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: D8LFK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK7_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 5.090e-43
Identity = 121/262 (46.18%), Postives = 158/262 (60.31%), Query Frame = 0
Query:   82 RSREQQKSLATAPASMTLDHDVPSTEDYAIASGVSSVASVKDD----LMDVNLEADASS--DPTKSEENEIEIDGP--------AAFEVEAAAARDPEGSKLFQKGSIRLAKRYGVHLTPTQLWRVMTLFQIQGRQLVILGLAPGRALRGSAGGASSADMSASSEDDTCDNRDMRRGAKGVYVCGQRALVTSPVQRLLQLHGVEMAEDEVGPMLQALRVRPFRMIRLGLLSKHEVAEL----FAQEGRSVGGLGGAPFGHSL 325
            RS    ++ + AP S      +PST  YA+AS V SV    DD    ++D+  EA A++   P+    +  + DGP        AAFE EAAAARDPEGS L+QK S+RLAKR+ VHLTPTQLWRVM LFQIQGRQLV+ GLAP R+L  SA  A+S D+ +S E+   +     RG K       R +V   VQRLL L+GVE+  DEV P+LQALRVR  R++RLGLL    + ++    + ++G+   G  G P GH +
Sbjct:   67 RSTPNPEATSAAPPS------IPSTPGYAVASNVGSVVGGGDDADMIMVDMPGEAAAAAAAGPSGGSVDGSQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKSSMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDASASAAAS-DVDSSDEEGGENKPSAVRGLKRSKSQVARTIVADHVQRLLILNGVELPGDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGK---GPRGGPPGHPM 318          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: A0A7S2AAX4_9EUKA (Hypothetical protein n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2AAX4_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 8.730e-15
Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 0
Query:  462 KKSMNMARFVEHRSPSPGNDVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAVVG-AVAPGEEAEVSVDLIAPLQAGMYDGFWRTFGE-GRRFGQRLWAKVLVV 578
            +++M   RFV+H S   G   T +  G  F K+W  RN+ +  WP    L+ +S+    + +  E   +G  V PGEE EVSV+++AP   G Y GFWR     GR+FGQR+W K+ VV
Sbjct:   89 RQNMLKGRFVKHVSIPDG---TELAPGDAFVKTWRFRNEGNLSWPAACYLLFISKRRGDMMTNTEKVFLGKVVGPGEEVEVSVNMVAPQPPGHYVGFWRMCSPTGRKFGQRVWVKINVV 204          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: A0A1V9ZXC5_9STRA (UBA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXC5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.200e-13
Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  481 DVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAVVGAVAPGEEAEVSVDLIAPLQAGMYDGFWR-TFGEGRRFGQRLWAKVLVV 578
            D + + AG NF K+W +RND  T WP +  L+ V  G  HL    E   V  + PG+  +VSV++ AP + G Y GFWR T  +G+RFG RLW  +LVV
Sbjct:  357 DGSTIRAGDNFIKTWRLRNDGKTRWPAKAELLCV--GGHHLEIETEPIFVPILPPGKMIDVSVEMQAPNKPGRYTGFWRLTTRDGKRFGHRLWVDILVV 453          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: L8GDU9_ACACA (PB1 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GDU9_ACACA)

HSP 1 Score: 83.2 bits (204), Expect = 3.910e-13
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 0
Query:  468 ARFVEHRSPSPGNDVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSR-GCEHLSSPQEAAVVGAVAPGEEAEVSVDLIAPLQAGMYDGFWRTFGEGRRFGQRLWAKVLV 577
            ARFV+H S   G   T +     F K+W  RN+ + PWP+EV+L+ +S+   + + +P+   V   V PGEE +VSV +++P +AG Y  ++R     ++FGQR+W K+ V
Sbjct:  280 ARFVKHVSIPDG---TEMAPDTPFTKTWRFRNEGTMPWPQEVTLMFISKINGDQMGAPEFVPVNTVVMPGEEVDVSVHMVSPSRAGHYQAYFRLCYGPKKFGQRVWIKINV 387          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: A0A7S1C8U5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8U5_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.510e-13
Identity = 48/119 (40.34%), Postives = 65/119 (54.62%), Query Frame = 0
Query:  461 GKKSMNMARFVEHRSPSPGNDVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAVVGAVAPGEEAEVSVDLIAPLQAGMYDGFWRTFGE--GRRFGQRLWAKVLV 577
            GK     ARFV++ + + G     V  G    K+W VRND++  WP +V L   S       +P    V G +APG EA+VSV++  P +AG+Y GFWR       RRFG RLW +V+V
Sbjct:  128 GKLGAKAARFVKNVTLTTG---AAVAGGVASVKTWRVRNDAARAWPADVHLEFCSGDTGVAGAPTP--VRGGLAPGAEADVSVEVTPPTRAGLYKGFWRLVDSRAARRFGSRLWVQVMV 241          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: Q55CE3_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55CE3_DICDI)

HSP 1 Score: 73.6 bits (179), Expect = 5.910e-10
Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 0
Query:  457 HGRGGKKSMNMARFVEHRSPSPGNDVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAVVGAVAPGEEAEVSVDLIAPLQAGMYDGFWR-TFGEGRRFGQRLWAKVLVV 578
            HG GG +         + +     D + +  G +F K+W +RND  T WPE  +L  +S         Q    V    PG++ ++SVDL+AP + G Y G+WR +  EG  FGQ +W  + V+
Sbjct:  317 HGFGGGRCTRKVYAARYLADISIKDGSVIPKGSSFTKTWRLRNDGKTSWPENTTLSFLSGDRFQY---QTDIFVPVCQPGQDIDISVDLVAPTKTGRYTGYWRLSTPEGFGFGQSIWVDIYVI 436          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: A0A160T6P4_9CHLR (Uncharacterized protein n=1 Tax=Candidatus Promineofilum breve TaxID=1806508 RepID=A0A160T6P4_9CHLR)

HSP 1 Score: 72.0 bits (175), Expect = 1.970e-9
Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 0
Query:  474 RSPSPGNDVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAVV-GAVAPGEEAEVSVDLIAPLQAGMYDGFWRTFG-EGRRFGQRLWAKVLV 577
            R+P P      +  G  FQKSW ++N+ +  W E   L PV       S      VV G VAPG+  +V+V+L+APL  G+Y GFW   G  G  FG R+W  + V
Sbjct:  353 RAPPP------ISPGTPFQKSWRLQNNGTCTWGEGYVLTPVGGNVPQASMGGAPTVVPGPVAPGQTVDVTVNLVAPLLPGVYQGFWTMRGPNGLLFGDRIWVGITV 452          
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Match: K5WC34_PHACS (Uncharacterized protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5WC34_PHACS)

HSP 1 Score: 72.0 bits (175), Expect = 2.390e-9
Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 0
Query:  481 DVTRVVAGQNFQKSWLVRNDSSTPWPEEVSLVPVSRGCEHLSSPQEAAV---VGAVAPGEEAE-VSVDLIAPLQAGMYDGFWRTFGEGRRFGQRLWAKVLVVRP 580
            D T    G  F KSW++RND  T WPEE +L  V+   + + S + AAV   VG V PG EAE V+ ++ AP  +G Y  +WR       FG  +W  ++VV P
Sbjct:  909 DGTVFPPGAEFVKSWVMRNDGETAWPEETTLRYVAG--DRMMSRESAAVRMPVGCVPPGAEAELVASEMKAPDVSGKYVSYWRLHDGKEFFGSSIWVDIVVVEP 1010          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2751.7533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTZ0_9PHAE3.350e-8842.84PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LFK8_ECTSI6.670e-4760.54N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
D8LFK7_ECTSI5.090e-4346.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2AAX4_9EUKA8.730e-1539.50Hypothetical protein n=1 Tax=Stereomyxa ramosa Tax... [more]
A0A1V9ZXC5_9STRA1.200e-1344.44UBA domain-containing protein n=1 Tax=Thraustothec... [more]
L8GDU9_ACACA3.910e-1337.84PB1 domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A7S1C8U5_9STRA5.510e-1340.34Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
Q55CE3_DICDI5.910e-1032.52Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
A0A160T6P4_9CHLR1.970e-938.68Uncharacterized protein n=1 Tax=Candidatus Promine... [more]
K5WC34_PHACS2.390e-940.38Uncharacterized protein n=1 Tax=Phanerochaete carn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainSMARTSM00666PB1_newcoord: 4..83
e-value: 0.0031
score: 26.8
IPR000270PB1 domainPFAMPF00564PB1coord: 7..80
e-value: 3.6E-8
score: 33.2
IPR000270PB1 domainPROSITEPS51745PB1coord: 4..83
score: 12.604
IPR032350Next to BRCA1, central domainPFAMPF16158N_BRCA1_IGcoord: 481..577
e-value: 2.1E-20
score: 73.3
NoneNo IPR availableGENE3D3.10.20.90coord: 5..83
e-value: 2.0E-6
score: 29.3
NoneNo IPR availablePANTHERPTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDcoord: 481..577
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 6..80
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 465..582
e-value: 7.4E-23
score: 82.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2751contigH-paniculata_contig2751:14954..17528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2751.7533.1mRNA_H-paniculata_contig2751.7533.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2751 13565..17617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2751.7533.1 ID=prot_H-paniculata_contig2751.7533.1|Name=mRNA_H-paniculata_contig2751.7533.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=604bp
MTAVHLVKVKLDGDLRIMEIPSPPLFDALVRATAEAYALQGTEGFIYTYQ
DADADQVRFDADSELDLAVRTSPAPLKITVLRSREQQKSLATAPASMTLD
HDVPSTEDYAIASGVSSVASVKDDLMDVNLEADASSDPTKSEENEIEIDG
PAAFEVEAAAARDPEGSKLFQKGSIRLAKRYGVHLTPTQLWRVMTLFQIQ
GRQLVILGLAPGRALRGSAGGASSADMSASSEDDTCDNRDMRRGAKGVYV
CGQRALVTSPVQRLLQLHGVEMAEDEVGPMLQALRVRPFRMIRLGLLSKH
EVAELFAQEGRSVGGLGGAPFGHSLGRGRGGGRGKGRGRGPPLAHHRHLP
HHPMRGPPGGGGRHHPPMFGMPPHCILPMSGGYAHGYRHQPPAHGIGFHG
KEFEGGGEWHDLMRGPPPGGFSHAWNEDESGHGRRGGGFRHMHEFAAGCG
GGGRGCHGRGGKKSMNMARFVEHRSPSPGNDVTRVVAGQNFQKSWLVRND
SSTPWPEEVSLVPVSRGCEHLSSPQEAAVVGAVAPGEEAEVSVDLIAPLQ
AGMYDGFWRTFGEGRRFGQRLWAKVLVVRPGDDVGAHVGEDMNAGVKKLS
LDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR032350N_BRCA1_central
IPR013783Ig-like_fold