mRNA_H-paniculata_contig2751.7532.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2751.7532.1
Unique NamemRNA_H-paniculata_contig2751.7532.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: D8LFK9_ECTSI (BCNT-C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK9_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 1.180e-76
Identity = 153/262 (58.40%), Postives = 184/262 (70.23%), Query Frame = 1 
Query:   10 MNEDKIPDSEEEDSDYAPEETGDGEDXXXXQPKPEETIGKGIRAHKRSAVDALWAEMNAGEA---LPVGAGSSTXXXXXXXXXXXX----AEKKANQVLAGIFGKKAASSIVSRASAQNGVKKRKTSGRGEEGKSEVLSRAQVLAASRIVEVSEIKKYAGQDILVKRTVTAGSAEHSAAAAVQKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKRDA 774
            M+ + +PDSEE+DSDY  +ET   ++      +PE+T+G      +RS +D +WA MNA  A    P   GS T                A KKAN+VLAGIFGKKAAS IVS A    G  KR+       G +E  +R ++LAASR VEV+E+KKYAG+DI+VKR VTAGSAEH AAA   KK G+D+VLAA+DGPKSISTVTKSSMDW+TYKAAEG+EG+M+QATKDGKGYLNKQDFLQRCDVRKFE ELE R +KRDA
Sbjct:    1 MSGEAVPDSEEDDSDYVQDETAGDDEEEDEVEEPEDTMGVATSDRQRSKIDDIWASMNASGAEATAPPAGGSGTGLAEGKGKKATKXXXXANKKANEVLAGIFGKKAASDIVSGA----GKGKRRV------GAAEGAARKKLLAASRKVEVTEVKKYAGKDIVVKRKVTAGSAEHVAAAGA-KKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGMEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 251
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A7S1TXE7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXE7_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.360e-22
Identity = 75/162 (46.30%), Postives = 102/162 (62.96%), Query Frame = 1 
Query:  262 EKKANQVLAGIFGKKAASSIVSRASAQNGVKKRKTSGRGEEGKSEVLSRAQVLAASRIVEVSEIKKYAGQDILVKRTVTAGSAEHSAAAAVQK-KAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENE 744
            +K+A +VL GIFGK  A++IV +A A  G +KRK   R  E  SE    A     S  V++++  K+AG+   V +TV A SAE  AA+A +K K G++SVL  + GPK+IST+ K+S+DWD YK    +   +  A+KDG  YL +QDFLQR D R FENE
Sbjct:   96 KKRALKVLGGIFGKAGAAAIVGKADA--GRRKRK---RATEDVSEAARAAVRNVKSEKVQITQSVKFAGEMTTVTKTVDAHSAEAKAASAPKKAKTGLESVLDEMKGPKTISTLEKTSVDWDGYKEEHKLNDSLADASKDG--YLTRQDFLQRVDARTFENE 250
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A4D9CWA7_9STRA (BCNT-C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA7_9STRA)

HSP 1 Score: 103 bits (256), Expect = 9.360e-21
Identity = 78/214 (36.45%), Postives = 104/214 (48.60%), Query Frame = 1 
Query:  265 KKANQVLAGIFGKKAASSIVSRASAQNGVKKRKTSGRGEEGKSEVLSRAQVLAASRIVE-------VSEIKKYAGQDILVKRTVTAGSAEHS---------------------------------------AAAAVQKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKR 768
            ++A ++LAGIFG   ASS+V++A            GRGE             A   +++       V+E KK+AGQ++ VKR V    AE                                         A  +  KKAG+D+VL  + GP+ ISTV KSS DW+T+KA  G+E E+ QATKDG  YL K+DFL+RCD R FE E + RNA R
Sbjct:  104 RRAQELLAGIFGNNTASSMVAKAGG---------GGRGEXXXXXXXXXXXTAARRALLKAHASKRIVTETKKFAGQEVQVKRVVVGEGAEGEGGREXXXXXXXXXXTLSKRQTALDPVVGPGPGMAEGKGGARGSEGKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 306
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A7S2PPL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPL4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.050e-20
Identity = 71/177 (40.11%), Postives = 104/177 (58.76%), Query Frame = 1 
Query:  268 KANQVLAGIFGKKAASSIVSRASAQNGVKKRKTSGRGEEGKSEVLSRAQVLAASRIVEVSEIKKYAGQDILVK-------RTVTAGSAEHSAAAAVQKKAG-IDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKRDA 774
            K  ++LA IFGK AA +++S AS+    KKRKT         E L+   +    +   V+E+K++AGQD+ V+        TV++       AA VQ K G +D VL+ + GP+ ISTVTK+S DWD +K   G++ E+Q+  +D   YL K++FLQR D+R+FE+E   R  KR A
Sbjct:   22 KKKKLLANIFGKNAAENMISSASSGLKKKKRKTRENVVAISDEKLNML-MNGVKQQKRVTEVKRFAGQDVRVEVAPTSVNGTVSSTEGATDTAAPVQHKTGGLDKVLSDLSGPQKISTVTKTSSDWDQFKDKHGLDDELQKKAQDKDAYLVKKEFLQRVDLRRFEHEKADREMKRAA 197
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A485K980_9STRA (Aste57867_1012 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K980_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.390e-20
Identity = 87/259 (33.59%), Postives = 124/259 (47.88%), Query Frame = 1 
Query:   43 EDSDYAPEETGDGEDXXXXQPKPEETIGKGIRAHK--------RSAVDALWAEMNAGEALPVGAGSSTXXXXXXXXXXXXAEKKANQVLAGIFGKKAASSIVSRASAQNGVKKRKTSGRGEEGKSEVLSRAQVLAASRIVE-----VSEIKKYAGQDILVKRTVTAGSAEHSAAAAVQKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKRDA*P 780
            ED DY PE   +G+       K +    + ++A K        +  VD +W+++NA  A+   +  ST            ++K  N++L+G+ GKK    +                    E K  VL  +     +  ++     V+E+ KYAGQ+  V +  TA            K + +DS LAA++ PK IST+ KSS+DWDT+K  EGI  E+QQ TKDG  YL KQDFL R DVRKFE E   R+  R A P
Sbjct:   18 EDEDYVPEADVEGQIEDQLDEKEDAEYARQMQAKKGTLQAKAPKRKVDDMWSDLNADTAV---SQKSTDK----------SQKLLNKLLSGVAGKKKKQMV-------------------HEFKIPVLGCSTTTKRATELKMPDETVTEVLKYAGQEYSVTKKATA-----------PKASALDSALAALNQPKKISTIEKSSVDWDTFKDKEGISDELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRANP 231
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: I2CQ62_NANGC (Craniofacial development protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ62_NANGC)

HSP 1 Score: 94.4 bits (233), Expect = 2.860e-19
Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 1 
Query:  535 QKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKR 768
            +KKAG+D+VL  + GP+ ISTV KSS DW+T+KA  G+E E+ QATKDG  YL K+DFL+RCD R FE E + RNA R
Sbjct:   41 KKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 116
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A8K1C5W9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5W9_PYTOL)

HSP 1 Score: 94.7 bits (234), Expect = 1.260e-18
Identity = 54/122 (44.26%), Postives = 76/122 (62.30%), Query Frame = 1 
Query:  403 SRAQVLAASRIVEVSEIKKYAGQDILVKRTVTAGSAEHSAAAAVQKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKR 768
            SRA +  A    EV E+ K+AGQ+  V + V         A   + K  +D VLA+ +GPK I+T+ K+S+DWD +K  EGIE E++QATKDG  Y+ KQ+FLQR D+++FE E   R  +R
Sbjct:  100 SRADIALAGTNQEVKEVVKFAGQEYSVSKRV---------APVAKSKQKLDDVLASFEGPKKINTIEKTSIDWDKFKEQEGIEDELKQATKDG--YIEKQEFLQRMDLKRFEIEKAERERQR 210
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A6G0WCK9_9STRA (BCNT-C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCK9_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.610e-18
Identity = 54/112 (48.21%), Postives = 73/112 (65.18%), Query Frame = 1 
Query:  439 EVSEIKKYAGQDILVKRTVTAGSAEHSAAAAVQKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKRDA 774
            +V+E+ K+AGQ+  V + V++             ++G+DS LAA++ PK IST+ KSSMDW+++K  EGI  E+QQ TKDG  YL KQDFL R DVRKFE E   R+  R A
Sbjct:  128 QVTEVLKFAGQEYSVTKKVSSS------------ESGLDSALAALNQPKKISTIEKSSMDWESFKDKEGIADELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 225
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A397DYY6_9STRA (BCNT-C domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DYY6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.100e-17
Identity = 56/123 (45.53%), Postives = 75/123 (60.98%), Query Frame = 1 
Query:  403 SRAQVLAASRIVEVS-EIKKYAGQDILVKRTVTAGSAEHSAAAAVQKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKR 768
            SR+  LAA+    VS ++ KYAGQ+  V +   A  A  SA         +D+ LA+++ PK +ST+ KSS+DWD++K   GI  E+ Q TKDG  YL KQDFL R D RKFE E  VR+ +R
Sbjct:   49 SRSSKLAAAATPVVSTQVLKYAGQEYSVTKKAAASGARESA---------LDAALASLNQPKKVSTIEKSSLDWDSFKDEAGIVDELDQYTKDG--YLEKQDFLHRVDARKFELEKAVRDKQR 160
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BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Match: A0A5D6XMC1_9STRA (BCNT-C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMC1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.090e-17
Identity = 56/123 (45.53%), Postives = 81/123 (65.85%), Query Frame = 1 
Query:  403 SRAQVLAASRIV-EVSEIKKYAGQDILVKRTVTAGSAEHSAAAAVQKKAGIDSVLAAIDGPKSISTVTKSSMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRNAKR 768
            +RA +L A+    +V ++ K+AG    V+ +VT  ++  + AA     +G+D VLA++DGPK +ST+ KSS+DWD +K AEGIE E++Q TK+G  YL KQDFL R D  +FE E   R+ KR
Sbjct:  109 TRADLLGANAAAAKVQQVVKFAG----VEYSVTTRASRPAKAAG---SSGVDHVLASLDGPKKVSTIEKSSLDWDQFKEAEGIEDELRQYTKNG--YLEKQDFLTRVDRNQFEREKAERDKKR 222
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2751.7532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFK9_ECTSI1.180e-7658.40BCNT-C domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S1TXE7_9STRA5.360e-2246.30Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A4D9CWA7_9STRA9.360e-2136.45BCNT-C domain-containing protein n=1 Tax=Nannochlo... [more]
A0A7S2PPL4_9STRA1.050e-2040.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A485K980_9STRA7.390e-2033.59Aste57867_1012 protein n=1 Tax=Aphanomyces stellat... [more]
I2CQ62_NANGC2.860e-1960.26Craniofacial development protein 1 (Fragment) n=1 ... [more]
A0A8K1C5W9_PYTOL1.260e-1844.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WCK9_9STRA7.610e-1848.21BCNT-C domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A397DYY6_9STRA2.100e-1745.53BCNT-C domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A5D6XMC1_9STRA5.090e-1745.53BCNT-C domain-containing protein n=1 Tax=Pythium b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2751contigH-paniculata_contig2751:6795..13537 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score257.7
Seed ortholog evalue5.8e-66
Seed eggNOG ortholog2880.D8LFK9
Preferred nameCFDP1
KEGG koko:K14537
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000812,GO:0000819,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006323,GO:0006325,GO:0006338,GO:0006996,GO:0007049,GO:0007059,GO:0007076,GO:0007155,GO:0008092,GO:0008150,GO:0008360,GO:0009987,GO:0010032,GO:0010941,GO:0016043,GO:0019222,GO:0019894,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022610,GO:0030261,GO:0031012,GO:0031056,GO:0031060,GO:0031323,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032991,GO:0033043,GO:0033044,GO:0034728,GO:0035065,GO:0042127,GO:0042981,GO:0043044,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051171,GO:0051246,GO:0051276,GO:0051321,GO:0051569,GO:0051570,GO:0060255,GO:0060548,GO:0062023,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070603,GO:0071103,GO:0071824,GO:0071840,GO:0080090,GO:0097346,GO:0098813,GO:0140014,GO:1901983,GO:1902275,GO:1902494,GO:1903046,GO:1903047,GO:1904949,GO:2000269,GO:2000270,GO:2000615,GO:2000756
EggNOG free text desc.chromosome organization
EggNOG OGsKOG4776@1,KOG4776@2759
Ec32 ortholog descriptionBCNT-C domain
Ec32 orthologEc-04_001830.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons6
Model size1464
Cds size768
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2751.7532.1prot_H-paniculata_contig2751.7532.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2751 6804..12850 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929831.646559-UTR-H-paniculata_contig2751:6794..68031622929831.646559-UTR-H-paniculata_contig2751:6794..6803Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2751 6795..6803 +
1691481030.3769116-UTR-H-paniculata_contig2751:6794..68031691481030.3769116-UTR-H-paniculata_contig2751:6794..6803Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2751 6795..6803 +
1622929831.7690012-UTR-H-paniculata_contig2751:12850..135371622929831.7690012-UTR-H-paniculata_contig2751:12850..13537Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2751 12851..13537 +
1691481030.4538426-UTR-H-paniculata_contig2751:12850..135371691481030.4538426-UTR-H-paniculata_contig2751:12850..13537Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2751 12851..13537 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929831.6633728-CDS-H-paniculata_contig2751:6803..68581622929831.6633728-CDS-H-paniculata_contig2751:6803..6858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 6804..6858 +
1691481030.3923914-CDS-H-paniculata_contig2751:6803..68581691481030.3923914-CDS-H-paniculata_contig2751:6803..6858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 6804..6858 +
1622929831.679839-CDS-H-paniculata_contig2751:7590..76341622929831.679839-CDS-H-paniculata_contig2751:7590..7634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 7591..7634 +
1691481030.4041831-CDS-H-paniculata_contig2751:7590..76341691481030.4041831-CDS-H-paniculata_contig2751:7590..7634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 7591..7634 +
1622929831.69552-CDS-H-paniculata_contig2751:10500..106711622929831.69552-CDS-H-paniculata_contig2751:10500..10671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 10501..10671 +
1691481030.4154525-CDS-H-paniculata_contig2751:10500..106711691481030.4154525-CDS-H-paniculata_contig2751:10500..10671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 10501..10671 +
1622929831.7134485-CDS-H-paniculata_contig2751:11184..113841622929831.7134485-CDS-H-paniculata_contig2751:11184..11384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 11185..11384 +
1691481030.425344-CDS-H-paniculata_contig2751:11184..113841691481030.425344-CDS-H-paniculata_contig2751:11184..11384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 11185..11384 +
1622929831.7325556-CDS-H-paniculata_contig2751:12137..122551622929831.7325556-CDS-H-paniculata_contig2751:12137..12255Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 12138..12255 +
1691481030.4348629-CDS-H-paniculata_contig2751:12137..122551691481030.4348629-CDS-H-paniculata_contig2751:12137..12255Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 12138..12255 +
1622929831.7530756-CDS-H-paniculata_contig2751:12670..128501622929831.7530756-CDS-H-paniculata_contig2751:12670..12850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 12671..12850 +
1691481030.4444187-CDS-H-paniculata_contig2751:12670..128501691481030.4444187-CDS-H-paniculata_contig2751:12670..12850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2751 12671..12850 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2751.7532.1

>prot_H-paniculata_contig2751.7532.1 ID=prot_H-paniculata_contig2751.7532.1|Name=mRNA_H-paniculata_contig2751.7532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=256bp
MNEDKIPDSEEEDSDYAPEETGDGEDEEEDQPKPEETIGKGIRAHKRSAV
DALWAEMNAGEALPVGAGSSTSKGKGQKSKKKKAEKKANQVLAGIFGKKA
ASSIVSRASAQNGVKKRKTSGRGEEGKSEVLSRAQVLAASRIVEVSEIKK
YAGQDILVKRTVTAGSAEHSAAAAVQKKAGIDSVLAAIDGPKSISTVTKS
SMDWDTYKAAEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFENELEVRN
AKRDA*
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mRNA from alignment at H-paniculata_contig2751:6795..13537+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2751.7532.1 ID=mRNA_H-paniculata_contig2751.7532.1|Name=mRNA_H-paniculata_contig2751.7532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6743bp|location=Sequence derived from alignment at H-paniculata_contig2751:6795..13537+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGTATACCATGAACGAGGACAAAATTCCCGACTCGGAGGAGGAGGATTC
TGACTATGCACCAGGTGAACCTATGCCGACTCTTTGTTTCGCACGGTATC
ATACTTACACCCACGGTTAGTTGTTTCGTTGTGTCTGTTCTGTTGTTTGT
TCTACAGTACAGTAGGTATCTCTTGATGTTGCTGCATTGGAAGGGTTGTA
GAGCAGTTGAGGATGCTGGGTTTGGCTATACTACGGACTGTTGCATAGAG
TCTGTCAGCCTGTGGGCCGTACTACGCGGGGAATACTGTCTGTGTCTACG
TTGACTCCGAGTAGTGCTACTGACTCCCTACCGTAGTACTCCTGGAGGTT
GTACAGCTTAACCACCCATACACATATCGATCCTCCATTCAACTGACTGG
AGGAACAGTCCAGAGTCCGAAGTCGGAAATGAGACAGAGCGGCACTGTGT
GCAGGCCACGTCTCGTGCGCGTTTGCAGTTAGCTTTGTCAAGTCGTTTCG
ATGTATTCGTCTGTTAGCAATTATTAAGCTGTTGTGTGCAGTTACTGCAC
AACGAATTCGAATACGTGAATTTCCAAACGTAACAGAGCAGTGTACAGCA
CCTCTGTATCTTAGTCTCCTTCATATGCAATCGTCTGCGATGTACCTGTT
CCTTGTTTCTCACCCAGTTCCATCCGTCTCCATCTCAGTCCATTCGTACT
TGTAACCAACTCGCCTTGTACGGTAAATGAGCTGTTGGATATTGATGTTC
AACGAGGGTTCTTTCATCGTATGTTATTGTGTTGTTGGCATCCCAGAAGA
AACGGGGGATGGCGAGGACGAGGAGGAAGATCAACCAAAGGTGATCATGT
GATATTAGAGGGAATGTGGTTCCAGAATGTTGAATTGTCGATTTGTCCGG
GCCTGATCGTCAATTCCCCATGCACGGCAGCTTTTGGGAAGAATCAACCG
TTCCTTACAATACGACAGGTAGATATAGTGCGTAGCAGTGCTACAAAGCT
GATTGCATGCAAATCGGTGAAGAACTTACTGTAAACGATAGCTGCGAGTG
TTGGACCATGCGGAAAAGCTGAAACCACTCGCTCTTCAGCTACGGAGGTG
AACTCCCCAGGAAACGTGGACGCCTAGAACTTGCGTGGGATGACAAGGTT
CAAGGTTTCGTTGCCCGGAAAAATATGAATAATTGGCGTATTCGCCCGAA
AATTAAAAGTCAGTCGCCTGAGTTTTAAAATGAGCTCATGGATTCTATGT
GCCCCGGACCATCCACGACTATTAATAATACTCGTAAATCGAATGGACAG
GGGTGGGTACTTTATTCTTTGTGCCCGCTCATTCTGAAACTCAGGCGAAT
ACATTTCAATTTCCGTGGCGAATACGCCAAGTATTCGTATTTCCGAAGGT
GCAAGGTTTCATCGCTAACTGTATGTAGATATCAGTACGTCTTTTGTATA
TGCTGTGTGGGTCGAGAAATCGATACTACGACTAGACCATTCGATTAGAT
TTTGTTAGCAAGCTGCATTCTAAAACAGAGATAACGTCCAGCTTCACTCG
CATTCAGCTGCGGATATCGATTTCTCTGATACTAGGAACGCCTTGAACTT
ACGTGGGATGCATATACCTCACCACCATCTGTCTGTGGATTCCCGTATTT
TTGTTGCATATGCTCTTTGGGGAGAAAAATTGGTGGTTTTGCATCCCCAG
TTCTTCACGTTATTTTAGCAAGCTGCGCTCTAAAACGAGGACCACACTTG
AATTCGTCCAATTGTATTCTGCTTTCTACTGCCTACAATGTGCTGGCTAT
CTGATGTATCTACATATACAGTATAGTTGCCGACACAACTAAAGTCATCT
CAGGCAGAGAGGCAGCCGAATTTGTTTTTCCAAACAGTTCGGCATCAACT
TCAATGCGCGTAAAATATTCACATGTGTTGCATAACATGATGGGACACTG
AATACCCATGTTATCTGATATGCACTTTGCGGTCAGAGTACTATGGCCGC
GCGTGATTCCCTCTCTTCATGATGCTTTGGAGGGGGGCAGAGCTACAGGC
GATCACCCGCAATTGCCGATTCGTCGTCGATTGAGCACTGTTTCGTTTCA
ACTCTTCCCCGGTGTGTGCCAGTGAATCGTAGCTGTGAGTTCGTGCTTTT
GCTTCCTAGCTTTTGCCCGGTGTACCGCACGCAGCCCCTCGAATAAGATG
CTCGACACTCAAGTGAGGCAAGCTGCAAATCAAATCAGGCCCAAACCCCT
CTCGCAGGAAAGGCGCCATGCGGCATACGTATCCTTGGAAGCACGTTCTC
TCTAGCATCACTGTTAATCGTATGCGTGTTGTCGGGGTGTGTGCAATATA
TTGCGTTGCGGTGTGTCTTTGAAAGGCAAGAGAAGACATTGTACACCGGC
CAGCTTGCTCGGCCTCATACGCAACACTAGTTTCTATTTGTCGCGCCTCC
TCAACGAAACACCAAAACAACCCTAACCCTGTGTATCAAATTTTGCACCC
CCCGGACAAATACGAATACTTTGCGTATTCGCTACGATAATGAAAAAGTA
TTCGCCGGAGTGTCAGACATGAATTGAAGTAACCCCCCCATGTCCATACG
TTTTACGAGGATTCTTAGTAGTCGTGGATAGTCCGGGGCATATAGAGTAC
ACGAGCTTATTCTGAAACTCAGATGAGTAAATTTTAATTTTTGTGGCGAA
TACGCCAAGTATTCGTATTTGTTCAGGGGGTGAACTTTTGCCACTGAGTG
CCAAGTACAGCTGGATCCTCAATAAGTCGAGCCACAGCAAGTGAGGGACA
CTACACGTGAAGAAAATCAGGTTCGATGTGGCGTCGGGAGTACTAAACGC
GCCGAAAAGACTTCTGTTGCGTACATTTCTAACGGCGGCTGGTTGAGGTG
CATGGTACAGCACACACCACGGCACAGCAATACCTGTCGCAAGTTTGTCG
CCGAGTAACGACCGGGGCTTCTCAGCGAGCCCGAATCATCTAGAGTTACC
TGGGGTGTTTGTCTGTGGATTCTTCATAGTGGAAATGTTGCCTTTGGCGC
ATCGTGTGGTGGGATGAAGCGGGGAGAATCTAGGAGGTCCGGTCGATTAA
GAACAGCGGGCTTAGTTAGACGAAGAACTGTTATACTGCTACAGGAACAC
CATATTGCTGACTATATATTATCCCAGCCTTTACCCACATCTGGCGAAAT
CGTAACTCCTTCGAGCCTGTTCTCGTCTCGCTATGTTTGTATTCGTGGAG
CGGTGTGCCACATTATTAGCAGATGTCGCTAGAAGGTTGAACGATGTCAA
ACTAGATCACTGACTTCCTTTCCGTATCGATGCGCTGGACGCTGACGTCA
ACCGAGCGCTTTTATGTTTCCGAGGCGCCACCAACCTTGGTACTCGAGTC
CTCGAAGGCAAATCCGCTGGTCGAGTGAATCATACAGCCCTTTAACCCGT
GCGTGCGTCTTCATCCTTACTGCCAGCGGCCAAAGCCTTGTTGTGCCAAC
AAACAAAAATCATCGATACGACGTTTTGACCCACTCGTGGGTACAGCGTT
GTTCTGTATTACTACACGTTCTCGTGTACATGCTCGAGTACTTTTGTGGT
CCGGTGCGTTGAAGTGAAGGCGACCGACTACTGCTGTAAACATCAAACAT
TGCCAGTGACAGCCACATCGCCACCCTCTTGCGTCGTCCCGTCTTTGTCT
TTCCAGCCCGAAGAGACCATTGGCAAAGGGATACGGGCGCACAAGCGATC
GGCAGTTGATGCCCTGTGGGCGGAGATGAATGCGGGAGAGGCGCTGCCAG
TCGGAGCAGGGTCGTCAACGAGCAAAGGGAAAGGACAGAAGAGCAAAAAG
AAGAAGGCTGAAAAAAAGGCCAACCAGGCGAGTGTGTATTTTTAGGGCGA
CCGCTATTCCCGACGATCTCTGGCACGCTGTTTGCATGACATGGGTGTAA
TGCACATGCCACCCCTTCACCTTCTCCCCCCGAAGCGAGCCGGAGTAGGT
ATATGAGCAATCGTCGGTCGATGGATGAGACAGGTGAGAGTTACGAAGTA
TGTCGTGCACCAAAATGCGGGGGGAGGGGGCGTTACAATTTGAGGGGGAA
AAGGAGTAGGAGACGCCCCTCGTGGCGTTTTACATCCAACCGCAGCCAGC
AACAAGTACGAGTTTGTCGTTCTACCCGAACTTCATTTATATATACTGAA
TAAATTGCCCGTAGTTCTCCCTTTTGACGAGAGATAAGATGTAGTGTACA
TAGACAAATCGATGATGCCTTTCCTGTCCTTTCTTCTTTGCCATCTCTGA
TACAGGAGTCACATTTCATCGATCGCCCAGTGGAGTGCATGTTAGCACGA
ATGGAAACGCTAGTTCAATCTGCCCTACCTCGATTGCCAGGTTCTTGCCG
GAATTTTCGGGAAGAAGGCAGCGTCGAGCATAGTGTCCAGGGCCAGCGCG
CAAAATGGGGTGAAGAAGCGGAAAACTTCTGGCAGGGGCGAGGAAGGAAA
GAGTGAGGTATTGTCTCGAGCACAGGTGCTGGCTGCCAGCCGCATCGTGG
AGGTGTCGGAGATCAAGAAGTACGCCGGACAGGATATCTTGTGAGTGTTG
CGTAGTAGATGAGTTTTTTGTTTTAACAATACTGTCCACAGTTAGTGGGG
AGGAAACAGCAAGGGGGCGGAGAGTTCTCATCGTTGTGTGTAGTCAATCA
CCGCGTTTTTTGCCGGCGGGTGGAGCGGGAGGTTTACCTGCTGTCTCTGG
ACTTGAAGTTTGTGCAGTTGTTTATGCTCTTTCACTATTGTACTAGCCCA
CGTCTTCTCGACCCATGCACAGCGTCTCACTGCGTTCGGAATGGCTCGCT
GTGGTCGCAGGTGTATGCCGTCTTTGAAGATTCGAGCTAGAAAGTCACTG
GAGCACGTCCAGAGTTGGAAATATGTTTCAAAACGATGATCAACATCTCA
AGCGTGTAAAGTAAGATGGACAGTACAAGACTCGTCCAGTTGAGCCTTCT
ACGGCCTCGAACGTGTTGTTCAATTGTTCGCTCATGGTATCTATGCCATC
TTGGAATGTTGCGGTGTGGGGCGAGGTTGCTGGGATCGCTGCATGCAACC
CGGTTACGGCGTACATGTCCGTTCGTATTGTTTCCGCGTACGCGAAGACA
AACAGCCGAGCAATCCTTGAAGGTGTCGCTTGAACAACATAGTTTGTCAA
AATCTAACCGCAATATATAGTAGAGTTGGAGACTCACCAAAAAAGAAAAC
TGTTGTAGGCTGTCTTTATATGCTGCACACGCCGGTATATATTCTGCTTG
ACCGCTCAGTGTTCTGGTCAATTTCGGGTGCTTGACGTGACAGGGTGAAG
CGAACAGTAACTGCAGGCTCTGCGGAGCACAGCGCAGCCGCCGCGGTGCA
GAAGAAAGCCGGTATCGATAGCGTGCTGGCTGCGATAGATGGACCCAAAT
CCATATCGACGGTAGGTGCATGTATTGCAACAGTTGTTGCTCCTATTGAA
TGATCCAATGCCATACAACACTGGAGCTTGTGCATATGGGCATGGCTTTG
TTCCGATCCACCTTTATCCAATGATTCCATTCTCATCGCAAAATTGATGA
CTGCTTTGGTCCTGCTGTGATTTGTGCATCCCTGTCCCCACAAGGTGCGT
ATATCTTGCCACCGCTATCACCTACAGCGCACATGGCTACGAGAGAGCAA
CCCCCTTCAAGTGTTTGTCCAGTTTTTCCAATATGACGGGTTGTTCTCGA
CTTGCGGCCCCCCCCCACCGGAAATTCGGTTCGACTGCAACGACTCATTT
TTATTTTTTGCTAGTTTTTTTGTTCCTCGCCCACATTTTCGCCGCCGGAC
CGTGGACTGTTACATTTTGTGAAAAGGTCACAAAGTCGTCCATGGACTGG
GATACTTACAAGGCGGCGGAGGGCATTGAGGGAGAAATGCAGCAAGCTAC
GAAAGACGGCAAGGGTTATCTCAACAAGCAGGACTTCTTGCAACGGTGCG
ACGTACGGAAATTCGAGAACGAGCTGGAGGTTCGAAATGCGAAACGAGAC
GCTTAGCCGCCGATGTACGTGCCGTTCTCTCCCTCTTTTTGGCCATCGTG
GTCAGCACTTTTCGCCAAGATGTAAATGGGATGGGGACTGAGGGTGATGT
GGAGATTTTTCGTCGGCGAAGTGACGACGTCTCTCCAAGAGACAGAGATA
ACTGTTGATTATTTTCCACTTCCAGTTGTTTTTCGATGCCACCAAAGCGA
TGGAGATTTGGCGATGATGTCGTGCGCAGGCCAGGGCAGTCTGGAACCGG
CCTGCTCAACGCGCTACCAGGTGGTAACCCCTGTCACCGCTTCCTAGCGA
GAGGACAGTCAATGAGCAAATAATCGGGCTACTTGGTTCGAGAAAAAGTA
CACACCTTATGTATCTGGCGCAGAGCAGTAGCTCGTCAAAGGGATACATG
TGTCTCACGTAGTCATGGACGGTGTCTGTGCGAGATGGGATCATGTTGTG
TTATCACAGGAACCTACGCCGGACGCCTGTATTTTAGTCTTAGGATGGAG
GGGAAGTAGAGGGCGTATATTGCTGTTTCTGTGCACATCGAACATGATTT
TTTTTGAAATGCAGGATTATGACCGGTAGCGGTACGCAATTTTTCATTTA
TCGGTCGACATGTAATATATTGAATGTACTTTCCCTTTTTTTTGCTGCTT
TACATGTGACTTTTAAAATTATGCAAATAAAAAATGTTCGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig2751:6795..13537+

>mRNA_H-paniculata_contig2751.7532.1 ID=mRNA_H-paniculata_contig2751.7532.1|Name=mRNA_H-paniculata_contig2751.7532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1536bp|location=Sequence derived from alignment at H-paniculata_contig2751:6795..13537+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGAGGACAAAATTCCCGACTCGGAGGAGGAGGATTCTGACTATGC
ACCAGATGAACGAGGACAAAATTCCCGACTCGGAGGAGGAGGATTCTGAC
TATGCACCAGAAGAAACGGGGGATGGCGAGGACGAGGAGGAAGATCAACC
AAAGAAGAAACGGGGGATGGCGAGGACGAGGAGGAAGATCAACCAAAGCC
CGAAGAGACCATTGGCAAAGGGATACGGGCGCACAAGCGATCGGCAGTTG
ATGCCCTGTGGGCGGAGATGAATGCGGGAGAGGCGCTGCCAGTCGGAGCA
GGGTCGTCAACGAGCAAAGGGAAAGGACAGAAGAGCAAAAAGAAGAAGGC
TGAAAAAAAGGCCAACCAGCCCGAAGAGACCATTGGCAAAGGGATACGGG
CGCACAAGCGATCGGCAGTTGATGCCCTGTGGGCGGAGATGAATGCGGGA
GAGGCGCTGCCAGTCGGAGCAGGGTCGTCAACGAGCAAAGGGAAAGGACA
GAAGAGCAAAAAGAAGAAGGCTGAAAAAAAGGCCAACCAGGTTCTTGCCG
GAATTTTCGGGAAGAAGGCAGCGTCGAGCATAGTGTCCAGGGCCAGCGCG
CAAAATGGGGTGAAGAAGCGGAAAACTTCTGGCAGGGGCGAGGAAGGAAA
GAGTGAGGTATTGTCTCGAGCACAGGTGCTGGCTGCCAGCCGCATCGTGG
AGGTGTCGGAGATCAAGAAGTACGCCGGACAGGATATCTTGTTCTTGCCG
GAATTTTCGGGAAGAAGGCAGCGTCGAGCATAGTGTCCAGGGCCAGCGCG
CAAAATGGGGTGAAGAAGCGGAAAACTTCTGGCAGGGGCGAGGAAGGAAA
GAGTGAGGTATTGTCTCGAGCACAGGTGCTGGCTGCCAGCCGCATCGTGG
AGGTGTCGGAGATCAAGAAGTACGCCGGACAGGATATCTTGGTGAAGCGA
ACAGTAACTGCAGGCTCTGCGGAGCACAGCGCAGCCGCCGCGGTGCAGAA
GAAAGCCGGTATCGATAGCGTGCTGGCTGCGATAGATGGACCCAAATCCA
TATCGACGGGTGAAGCGAACAGTAACTGCAGGCTCTGCGGAGCACAGCGC
AGCCGCCGCGGTGCAGAAGAAAGCCGGTATCGATAGCGTGCTGGCTGCGA
TAGATGGACCCAAATCCATATCGACGGTCACAAAGTCGTCCATGGACTGG
GATACTTACAAGGCGGCGGAGGGCATTGAGGGAGAAATGCAGCAAGCTAC
GAAAGACGGCAAGGGTTATCTCAACAAGCAGGACTTCTTGCAACGGTGCG
ACGTACGGAAATTCGAGAACGAGCTGGAGGTTCGAAATGCGAAACGAGAC
GCTTAGGTCACAAAGTCGTCCATGGACTGGGATACTTACAAGGCGGCGGA
GGGCATTGAGGGAGAAATGCAGCAAGCTACGAAAGACGGCAAGGGTTATC
TCAACAAGCAGGACTTCTTGCAACGGTGCGACGTACGGAAATTCGAGAAC
GAGCTGGAGGTTCGAAATGCGAAACGAGACGCTTAG
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