mRNA_H-paniculata_contig27480.7519.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: D8LBA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA1_ECTSI) HSP 1 Score: 296 bits (759), Expect = 2.710e-92 Identity = 167/264 (63.26%), Postives = 204/264 (77.27%), Query Frame = 1
Query: 103 PSLCRVPSSTL--QTVVVGASTDRLYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTNVPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMKSEKEAMRDQRDAEEDLAIIMNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLCAEMEEARKARKR 888
PSL +VP Q V+VG STDRLYRTNLAEVE+ KK+RL+ L+R+TV KYK+ E+AG+G FRLHETRNTLDAL++EAE++ + ELQFDKRF T+VP YPEEG+QVRLNAAAILREDALLK+KQG DA+LIK+FE ELRDSTE+YLWQ EMR++D AIRKEQ+E KRAYAKASQ+AARD+LEMQRAANSE+ +R+K EK+ M++QR+AEE+LA+ MNQ +LC E+EE R ARKR
Sbjct: 209 PSLRKVPEPMKIEQAVLVGPSTDRLYRTNLAEVESGKKERLEELRRQTVAKYKEMEEAGKGMFRLHETRNTLDALRDEAEKKIVEELQFDKRFPTDVPKYPEEGSQVRLNAAAILREDALLKRKQGQDAKLIKAFESELRDSTEFYLWQTEMRDRDAAIRKEQVEMKRAYAKASQQAARDSLEMQRAANSEVAARVKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKR 472
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: A0A835ZFS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS9_9STRA) HSP 1 Score: 166 bits (421), Expect = 3.070e-43 Identity = 99/180 (55.00%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 214 RLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTNVPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMKSEKEAMRDQRDAEEDLAIIMNQ 753
RL K T +KY++AE G G+F+LHETRNT+DA ++E E + +ELQF +R P + + A+VRLN AILREDALLKKKQ DA LIK++E ELRDSTEY WQ MREKD ++ EQ ERKR AKASQ AAR AL Q AAN E+ +K+EK M QR AEE+L +++N+
Sbjct: 263 RLAQTKAATAKKYEEAEAQGLGEFKLHETRNTVDAKRKEIEAQRAAELQFSRRPAKPPPQFSDTAAEVRLNLGAILREDALLKKKQAEDASLIKAYESELRDSTEYIRWQTSMREKDAQLKLEQTERKRQQAKASQAAARAALIGQDAANHELAQCIKAEKAVMAQQRRAEEELKLMINK 442
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: A0A7S2CHC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHC2_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.670e-32 Identity = 73/157 (46.50%), Postives = 102/157 (64.97%), Query Frame = 1
Query: 283 FRLHETRNTLDALKEEAEQRTISELQFDKRFKTNVPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMKSEKEAMRDQRDAEEDLAIIMNQ 753
F+LHETR+ L ++ E E++ EL FDK + P EGA V+LN AAILRED+L KKKQ +A+ I+++E ELRDSTE++ WQ EMR KD+ +E +ER R AK S AR A+E Q+ N + S++K E +AM +QR E + +MN+
Sbjct: 13 FKLHETRSNLQRVRREVEEKRAKELDFDKDKRAPPVRMPREGATVKLNTAAILREDSLYKKKQEQEARQIQAYEAELRDSTEFHAWQTEMRSKDIHRARENVERTRVLAKLSAEEARRAIERQKEDNLALASQIKEESDAMMEQRALEVQMQAMMNR 169
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: A0A024UCP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCP7_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.220e-23 Identity = 67/174 (38.51%), Postives = 120/174 (68.97%), Query Frame = 1
Query: 169 LYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTN-VPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMK 687
L + LA+++ +++R +A+K + ++KY+++ A Q F+L ET++ L+A+K+E E + ++EL +K+FK P++ E+ A V+LN AAILREDAL KKKQ +A+LI+++E +LRD++E+Y WQ++M +KD A + Q+E++R +Q A +A + N ++ ++MK
Sbjct: 225 LNKLTLADIQEKQQQRREAIKEQVLKKYQES--AAQP-FQLEETKSNLEAIKQEVEDQRMAEL--NKKFKAKPAPNFSEKDAAVKLNTAAILREDALYKKKQEKEAKLIQAYESDLRDASEFYRWQSDMLKKDDAAHRAQVEKRRLEMAQAQHEAIEASLRAKVENRDVANQMK 393
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: T0QIK5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIK5_SAPDV) HSP 1 Score: 107 bits (266), Expect = 3.290e-22 Identity = 68/174 (39.08%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 169 LYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTN-VPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMK 687
L + L+++ET +K+R +A K+E ++KY E++ F+L ETR+ LDA+K+E E ++EL+ +FK P + ++ A V+LN AAILREDAL KKKQ +A++++++E +LRD++E+Y WQ++M +KD + Q+E +R +Q A +A +A N E+ +MK
Sbjct: 225 LNKLTLSDLETQQKQRREAAKQEVLKKY---EESSAQPFKLEETRSNLDAIKKEVEDARMAELKL--KFKAKPAPLFTDKDAPVKLNTAAILREDALYKKKQEKEAKILQAYESDLRDASEFYRWQSDMIKKDDEDHRRQVEMRRLEMAQAQHEAIEASLRAKAENREVAIQMK 393
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: W4FK58_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FK58_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.380e-21 Identity = 65/174 (37.36%), Postives = 115/174 (66.09%), Query Frame = 1
Query: 169 LYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTN-VPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMK 687
L + LA+++ +K R DA+K + ++KY+++ F+L ETR+ L+A+K+E E + ++E+ +++FK P + ++ A V+LN AAILREDAL KKKQ +A+LI+++E +LRD++E+Y WQ++M +KD A + Q+E +R +Q A +A + N ++ ++MK
Sbjct: 225 LNKLTLADIQDHQKHRRDAMKEQVLKKYQESVAQP---FQLEETRSNLEAIKQEVEAQRMAEV--NRKFKAKPAPTFSDKDAPVKLNTAAILREDALYKKKQEKEAKLIQAYESDLRDASEFYRWQSDMIKKDDAAHRAQVETRRLEMVQAQHEAIEASLRAKVENRDVANQMK 393
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: W4FJS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJS5_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.770e-21 Identity = 65/174 (37.36%), Postives = 115/174 (66.09%), Query Frame = 1
Query: 169 LYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTN-VPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMK 687
L + LA+++ +K R DA+K + ++KY+++ F+L ETR+ L+A+K+E E + ++E+ +++FK P + ++ A V+LN AAILREDAL KKKQ +A+LI+++E +LRD++E+Y WQ++M +KD A + Q+E +R +Q A +A + N ++ ++MK
Sbjct: 225 LNKLTLADIQDHQKHRRDAMKEQVLKKYQESVAQP---FQLEETRSNLEAIKQEVEAQRMAEV--NRKFKAKPAPTFSDKDAPVKLNTAAILREDALYKKKQEKEAKLIQAYESDLRDASEFYRWQSDMIKKDDAAHRAQVETRRLEMVQAQHEAIEASLRAKVENRDVANQMK 393
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: A0A397FKZ9_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FKZ9_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.080e-21 Identity = 61/145 (42.07%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 169 LYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTN-VPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKR 600
L + LA+++ +K R DA+K + ++KY+++ A Q F+L ETR+ L+A+K+E E + ++E+ +++FK P + ++ A V+LN AAILREDAL KKKQ +A+LI+++E +LRD++E+Y WQ++M +KD A + Q+E +R
Sbjct: 276 LNKLTLADIQDHQKHRRDAMKEQVLKKYQES--AAQP-FQLEETRSNLEAIKQEVEAQRMAEV--NRKFKAKPAPTFSDKDAPVKLNTAAILREDALYKKKQEKEAKLIQAYESDLRDASEFYRWQSDMIKKDDAAHRAQVETRR 415
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: A0A397AQP2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQP2_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.390e-21 Identity = 61/145 (42.07%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 169 LYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTN-VPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKR 600
L + LA+++ +K R DA+K + ++KY+++ A Q F+L ETR+ L+A+K+E E + ++E+ +++FK P + ++ A V+LN AAILREDAL KKKQ +A+LI+++E +LRD++E+Y WQ++M +KD A + Q+E +R
Sbjct: 225 LNKLTLADIQDHQKHRRDAMKEQVLKKYQES--AAQP-FQLEETRSNLEAIKQEVEAQRMAEV--NRKFKAKPAPTFSDKDAPVKLNTAAILREDALYKKKQEKEAKLIQAYESDLRDASEFYRWQSDMIKKDDAAHRAQVETRR 364
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: A0A485KZX1_9STRA (Aste57867_13473 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZX1_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.750e-21 Identity = 66/173 (38.15%), Postives = 111/173 (64.16%), Query Frame = 1
Query: 169 LYRTNLAEVETCKKKRLDALKRETVQKYKDAEQAGQGKFRLHETRNTLDALKEEAEQRTISELQFDKRFKTNVPHYPEEGAQVRLNAAAILREDALLKKKQGHDAQLIKSFEGELRDSTEYYLWQAEMREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMK 687
L + LA+++ KKKRL+ +K + ++KY E++ F+L ETR+ L+A+K E E++ ++EL+ +FK + A V+LN AAILREDAL KKKQ +A++I+++E +LRD++E+Y WQ+ M +KD + Q+E++R +Q+ A +A +A N + +MK
Sbjct: 225 LNKLTLADIDVQKKKRLEQMKEQVLKKY---EESSAQPFQLEETRSNLEAIKREVEEQRMAELKL--KFKAKPAPSFTKDAPVKLNTAAILREDALYKKKQEKEAKIIQAYESDLRDASEFYRWQSGMMKKDDEDHRAQVEKRRLEMVQAQQEAIEASLRAKAENRVVAIQMK 392 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27480.7519.1 >prot_H-paniculata_contig27480.7519.1 ID=prot_H-paniculata_contig27480.7519.1|Name=mRNA_H-paniculata_contig27480.7519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp MREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMKSEKEback to top mRNA from alignment at H-paniculata_contig27480:210..3072+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27480.7519.1 ID=mRNA_H-paniculata_contig27480.7519.1|Name=mRNA_H-paniculata_contig27480.7519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2863bp|location=Sequence derived from alignment at H-paniculata_contig27480:210..3072+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27480:210..3072+ >mRNA_H-paniculata_contig27480.7519.1 ID=mRNA_H-paniculata_contig27480.7519.1|Name=mRNA_H-paniculata_contig27480.7519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig27480:210..3072+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |