prot_H-paniculata_contig26932.7369.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26932.7369.1
Unique Nameprot_H-paniculata_contig26932.7369.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 8.620e-28
Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    1 EAGTSRGDSCQWSTAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHVAGPESDTRG 80
            E G + G S  WS+ ESC++CFGEYA G+ LCRLPCRH YHAECID WLDG  H+WCPLCK  LL   E   G ++D  G
Sbjct:  441 ERGMTGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNGSDNDEIG 520          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.850e-26
Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   12 WSTAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQE 69
            WS +ESC++CFGEYA G+ LCRLPCRH YHAECID WLD   H+WCPLCK  LL   E
Sbjct:   72 WSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLLPSE 129          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 4.760e-25
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:   13 STAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHV 71
            ST  SC+VCFG+Y YGE LCRL C H+YHA+CIDEWLDG NH WCPLCK D++S   ++
Sbjct:  247 STGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYL 305          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 7.340e-25
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:   13 STAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHV 71
            ST  SC+VCFG+Y YGE LCRL C H+YHA+CIDEWLDG NH WCPLCK D++S   ++
Sbjct:  254 STRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIISTSGYL 312          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.030e-22
Identity = 41/72 (56.94%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    8 DSCQWSTAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHVAGPESDTR 79
            DS +WST ++C+VCFG+Y  G+ L RLPCRHVYHA+CIDEWLD A    CPLCK DL     H   P+   R
Sbjct:  249 DSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL----RHATPPDDPCR 316          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 9.510e-22
Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    8 DSCQWSTAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHVAGPESDTR 79
            D+ +WST ++C+VCF +Y  G+ L RLPCRHVYHA+CIDEWLD A    CPLCK DL     H   P+  +R
Sbjct:  149 DTGEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL----RHATPPDDRSR 216          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.460e-21
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    5 SRGDSCQWSTAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHVAGPESDTR 79
            ++ DS +WST ++C+VCFG+Y  G+ L  LPCRHVYHA+CIDEWLD A    CPLCK DL     H   P+  +R
Sbjct:  339 AQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDL----RHATPPDDRSR 409          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: A0A7R9ZSU8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSU8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.060e-13
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   18 CVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHV 71
            C +C GEY  GE+L  LPC+HVYHA+CI  W D  NH  CPLC  DL +   H 
Sbjct:  175 CSICLGEYEDGENLVSLPCKHVYHADCITSWTD--NHTRCPLCNFDLAAVTHHA 226          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: UPI001035FBDA (E3 ubiquitin-protein ligase RHA2A-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001035FBDA)

HSP 1 Score: 66.6 bits (161), Expect = 4.660e-12
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   14 TAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHV 71
            +A  CVVC  +   GE + RL CRH +H EC+D WLD  N + CPLC+  L+SEQ  V
Sbjct:   76 SASDCVVCMSKLRDGEKVRRLACRHAFHKECLDGWLDHLNFS-CPLCRSPLVSEQRVV 132          
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Match: A0A251U2E9_HELAN (Putative RING-H2 finger A2A n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251U2E9_HELAN)

HSP 1 Score: 67.0 bits (162), Expect = 5.030e-12
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   18 CVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLDGANHAWCPLCKLDLLSEQEHV 71
            CVVC   +A GEH+ +L CRHV+H EC D WLD  N   CPLC+  L+S++  V
Sbjct:  100 CVVCLSGFADGEHVRKLACRHVFHKECFDGWLDQLNFK-CPLCRSPLVSDERVV 152          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26932.7369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQW5_ECTSI8.620e-2860.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE1.850e-2668.97RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX3_ECTSI4.760e-2566.10RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE7.340e-2566.10RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI3.030e-2256.94RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE9.510e-2254.17RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI2.460e-2153.33RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7R9ZSU8_9STRA1.060e-1353.70Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
UPI001035FBDA4.660e-1250.00E3 ubiquitin-protein ligase RHA2A-like n=1 Tax=Cam... [more]
A0A251U2E9_HELAN5.030e-1251.85Putative RING-H2 finger A2A n=2 Tax=Helianthus ann... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 18..60
e-value: 1.5E-5
score: 34.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 17..61
e-value: 9.0E-12
score: 45.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 18..61
score: 11.575
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..77
e-value: 2.2E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR45969FAMILY NOT NAMEDcoord: 11..74
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 16..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26932contigH-paniculata_contig26932:1302..3121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26932.7369.1mRNA_H-paniculata_contig26932.7369.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26932 1302..3121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26932.7369.1 ID=prot_H-paniculata_contig26932.7369.1|Name=mRNA_H-paniculata_contig26932.7369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
EAGTSRGDSCQWSTAESCVVCFGEYAYGEHLCRLPCRHVYHAECIDEWLD
GANHAWCPLCKLDLLSEQEHVAGPESDTRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD