mRNA_H-paniculata_contig269.7357.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: D8LQG1_ECTSI (DEP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG1_ECTSI) HSP 1 Score: 640 bits (1650), Expect = 1.120e-212 Identity = 340/590 (57.63%), Postives = 422/590 (71.53%), Query Frame = 1
Query: 760 LTLDAAEILCKEMKEGVEVADRDYGTAVFKNAFVGKEAVDWMLTKDVAGSRAEAVAIGQRLVEFGMVEQLNSAYRFVDGELYFEFQDSNTSWKKAVEMDLDAAKALGLRIHMEVQVSTAVDEFGEVQKGCFSGTTLIAWMLNERVATHRNEASAIANKLMFFGILES-SNPEGGKFRPSAISLYHLKALALASLPPTHIFPMLQQLCMSILQVSCGVAATQGKVEELDFGLRKLVVTSCSGSPIFIKEMCQSLCSMDGLQVVRTSSDKTRAILKATGANGSNAAVPTSVQEIVAARIDALDATVGLVLKMSFVAYGMLLHSYRWMLHYSVVTAMTATGGESNMVLARHWLQVAKGDPSIEEIQDLGGSEAYLALLDAAVSCLSEAIRELRTMGQFIDASLFFKEGLEILERIPETPRRCNLEIELLLQGCLLTQLTDGYTESLFANASKEMLDEIPPKCVTLRMEPAAILAAVQTKRGQFQKAKVFTAVIEEWKAVGSPPPLCLVMYEPVVTLMSMSAILAAMSADDSKYLRWINELERYLKS--SKASKQSFNLYASLSLFGELYPMCFEYSEMVRFYRSVYQVIYNPQ 2520
L +AAE LC +M+ + + DRDYG+ +FK +FVG +AVDWM +A SR EAVAIGQRLVEFG+V+ +NS +RF+D L++EF+ +W KA EMD+DAAKAL +R++ME++ E VAT NEA AIA+KLM I+ES S+ +F+PS S Y LKALAL++LPPTHIF +L+QLC++ILQV+C AA +V+ELDF LRKLV+TSCSGSP+FI E+CQSLCS G+Q V TSS K+RA LK TG +G A P SV EIVAARID L++T LVLKMS AYGMLLHS RW LHY +T G +S MVLARHWLQVA G+PS EI DLGG E Y + + +S+AI EL MGQFIDAS++F +GLE+L+R+ +TPRR LEI+LLLQGC LT +GYT +L A K + D IP V LR+EPAAILAA+ T+RGQF++A+V+T V+ EWKA G P PLCLVMYEPVVTLMS++ ILAA+ ADDS++LRW+NELE YLKS S SK+ FNLYAS+SLFG LYPMCFEY+EM RFY SVY PQ
Sbjct: 3 LGFEAAEFLCLKMRSCIPIEDRDYGSTIFKKSFVGSQAVDWMCDTGIAASRNEAVAIGQRLVEFGLVDHVNSIFRFMDELLFYEFRTKGANWAKATEMDIDAAKALAIRMNMEIE---------------------------EYVATCVNEAVAIADKLMTLSIIESTSSTNKERFKPSCDSFYVLKALALSALPPTHIFGLLKQLCLAILQVACACAAEVRQVDELDFALRKLVLTSCSGSPLFITELCQSLCSTQGIQKVSTSSGKSRAALKTTGKDGGLATGPRSVSEIVAARIDTLESTASLVLKMSAAAYGMLLHSNRWKLHYRAAVVLTEQGDQSYMVLARHWLQVALGNPSAAEIADLGGHEVYREHMHMTIELVSKAIGELMGMGQFIDASVYFNDGLEVLKRMADTPRRKCLEIDLLLQGCRLTSFIEGYTTTLVEFARKVLFDSIPSAKVVLRIEPAAILAAILTQRGQFKQARVYTNVVAEWKAAGRPVPLCLVMYEPVVTLMSINIILAAVGADDSRHLRWLNELESYLKSNDSGVSKKPFNLYASMSLFGMLYPMCFEYAEMFRFYHSVYXXXXXPQ 565
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A6H5K1R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R6_9PHAE) HSP 1 Score: 387 bits (994), Expect = 1.420e-115 Identity = 214/430 (49.77%), Postives = 277/430 (64.42%), Query Frame = 1
Query: 2215 TAVIEEWKAVGSPPPLCLVMYEPVVTLMSMSAILAAMSADDSKYLRWINELERYLKS--SKASKQSFNLYASLSLFGELYPMCFEYSEMVRFYRSVYQVIYNPQVLLPVRRGLMFQAPTASSRVQAQNPIITKGIEVMSLMVNVHDSVHAENEMTSKPRHCLKELISIVKKEPTPATCASGYQAARILHQWSKARSICDLWDTLQQQPPLSDASLNLCANCIIVLYSAVTNYPSEESG---VAGSLPSSVKNTPESLQRGTGFGTRQY-----------DNRAVDVYHPIKLYCKGDIEVGMQIKDEIAMREGKIPPSQEDQQRWMERHKLASKMFLEAATSSAQTGNGLMEVRARTAYAQVTWTHLHEEDTARLSLRSIFDKFDTLCSQPNFFTPLRLTGLTSAMHLNSDMGGCYSSDESDVDSDEYGF 3456
T EWKA G P PLCLVMYEPVVTLMS++ ILAA+ ADDS++LRW+NELE YLKS S SK+ FNLYAS+SLFG LYPMCFEY+EM RFY SVY V+Y+PQVLLP+RRGLMFQA +A+SRVQA+N +IT+G+EVMSLM V+ S+ + + KP+ +L+SIV+ +PTPA CA+ YQAAR+L W +AR LWD L +A N A + YP + + +L +T ++R F T ++ VD+Y I L+CKGD E+G + + + P + + +++ +LA+++F +AA +A GNGLMEVRA +A A++ W L + AR LR IF+KFDTLCS PNFFTPLRLTGLT+AM LNSDMGGC S D D DEYGF
Sbjct: 15 TQAKHEWKAAGRPVPLCLVMYEPVVTLMSINIILAAVGADDSRHLRWLNELESYLKSNDSGVSKKPFNLYASMSLFGMLYPMCFEYAEMFRFYHSVYHVVYHPQVLLPIRRGLMFQASSATSRVQAKNVVITQGVEVMSLMCQVYQSITSPVTNSKKPKQYFSQLMSIVQSQPTPAACAAVYQAARLLRLWDRARESLQLWDALPSFESCEEARRNANAGASDATFDVAALYPPIDKTADTIFTALGPRELSTDSRMKR--SFSTDSMGRLDAGDDDLAEDVPVDIYGCILLFCKGDTEIGEVMDNRRPKGDATSPAQDQTDELQLKKTRLAAELFAKAADDAALIGNGLMEVRASSACARLLWETLDQGPDARQRLRQIFEKFDTLCSLPNFFTPLRLTGLTAAMRLNSDMGGC-SEDGDTSDKDEYGF 441
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A835Z7V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V5_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.700e-80 Identity = 285/1043 (27.33%), Postives = 399/1043 (38.26%), Query Frame = 1
Query: 1387 LQVSCGVAATQGKVEELDFGLRKLVVTSCSGSPIFIKEMCQSLCSMDGLQVVRTSSDKTRAILKATGANGSNAAV-PTSVQEIVAARIDALDATVGLVLKMSFV-----------------------------------------------------------------------------------------AYGMLLHSYRWMLHYSVVTAMT-------ATGGESNMVLARHWLQ---------------------VAKGDPSIEEIQDLGGSEAYLALLDAAVSCLSEAIRELRTMGQFIDASLFFKEGLEILERIPETPRRCNLEIELLLQGCL-----------------LTQLTDGYTESLFANASK------------------------------------------EMLDEIPPKCVTL--------------RMEPAAILAAVQTKRGQFQ--------------------------------------------------KAKVFTAVIEEWKAVGSPPPLCLVMYEPVVTLMSMSAILAAMSADDSKYLRWINE--------------------------------------LERYLKSSKASKQSFNLYASLSLFGELYPMCFEYSEMVRFYRSVYQVIYNPQ----------------------------------------VLLPVRRGLMFQAPTASSRVQAQNPIITKGIEVMSLMVNVHDSVHAENE-----MTSKPRH-------CLKELISIVKKEPTPATCASGYQAARILHQWSKARSICDLWDT------------LQQQPPLS-------------DASLNLCANCIIVLYSAVTNYPSEESGVAGSLPSSVKNTPESLQRGTGFGTRQYDNRAVDVYHPIKLYCKGDIEVGMQIKD--EIAMREGKIPPSQEDQQRWMERHKLASKMFLEAATS-SAQTGNGLMEVRARTAY--------------AQVTWTHLHEEDTARLSLRSIFDKFDTLCSQPNFFTPLRLTGLTSAMHLNS 3396
++++CG V+ELD LRKL+ ++CSG+P F++EMC +L + D L + +TSS K RA L+ T SN + P +VQEIVAARID LD ++ LVLK++ V AY MLLHSYRW LHY V AM + GG LA HWL+ VAK +PS EI D GG EA+ +L AV +S+A++ L ++GQF DAS +F E L +++R+PE+PRR LEI LLLQGC L Q DG+T+SL A + ++ DE PP V L R+E AAILA+V RG F + +TA ++ W+ P PLCL MYEPV+TLM+ + +LAA+ ADD+ + W+N+ ++RYLK S AS + F+LY S+SLFG YP+C E +E VRF+ +VY+V+YNPQ V+LP+RRGL +QAPTA+SR+ A+NP++T+G EVMSLM + ++V E K R L EL++ ++ P+ CA+ YQAAR+L W A I LW + QP L C I + + E+ S S + P G+ G + E+A RE E K+ + LE + S + G+GLM VRA T + ++ L + A + ++ D + LC PN+F P+RL L+SAM LNS
Sbjct: 341 IEMACGYMG----VDELDAELRKLITSTCSGNPFFVREMCTNLLTSDTLVIQKTSSQKDRATLRKTFKGTSNGPILPIAVQEIVAARIDTLDPSLALVLKVASVLGEWFSFELLSTVFPIDMEEETLQAHLADLAARNFLQRVAGEGGDPSSPPGTPVANASQRSISDAQSVESGGDARAVWYRFSHVHMRNTAYSMLLHSYRWRLHYRVAAAMADGYNGENSVGGAGTTSLAHHWLEDSYNGXXXXXXXXXXXXXXXEVAKFEPSRHEIDDFGGEEAFGEILHRAVVVISKAMQHLLSVGQFTDASNYFGEALLVVKRLPESPRRDVLEIGLLLQGCQXXXXXXXXXXXXXXXXQLLQFMDGHTDSLLGYAKRALDICCRRGVKVPFKQKVRACLFIAQHGVMVGDQEGALAQLAKLYDETPPDNVLLXXXXXXXXXXXXXIRLESAAILASVLVVRGDFNAHTSLADSLPRCCTTAPPPXXXXLXXXXXXXXXXXXXXXXXXXXXXXXXXSVRRYTAELKRWENARRPSPLCLCMYEPVITLMTSNVVLAALQADDTSHQNWMNQXXXXXXXXXXXXVLRCSETDVILTGMRAAAISTITGGIVQRYLKDSAASHRPFHLYTSMSLFGITYPVCVEVAETVRFFHAVYRVVYNPQNTVICFVDMHSLAVCICSIAELLNPHLPDQTASVLTLRRKVMLPLRRGLFYQAPTAASRILAENPVVTQGFEVMSLMCKIMETVQKEKTRGNMVQLKKARQSAAYDACALCELMTGLRACPSVPLCAAVYQAARVLGDWGVAHEILHLWSATAAMQRHAQSQCIMYQPLLPYHXXXXXXXXXXXXXXXXXXXRCHIQADLMLCEREARETAARTSAQFSSXXXXXXXXXXXXXXXXXXXXXXXXXHEPPS---DGEDSTGSEYMTAAEVAARE-------------QENAKIIA--LLETSIKLSKELGHGLMVVRATTEHXXXXXXXXXXXXXLVRIVDGELDDVGRASKLMEALLDTYQDLCPLPNYFAPVRLEALSSAMALNS 1361
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A6H5K3Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y5_9PHAE) HSP 1 Score: 185 bits (469), Expect = 3.060e-47 Identity = 119/269 (44.24%), Postives = 142/269 (52.79%), Query Frame = 1
Query: 1402 GVAATQGKVEELDFGLRKLVVTSCSGSPIFIKEMCQSLCSMDGLQVVRTSSDKTRAILKATGANGSNAAVPTSVQEIVAARIDALDATVGLVLK-------------------------------------------------------------MSFVAYGMLLHSYRWMLHYSVVTAMTATGGESNMVLARHWLQVAKGDPSIEEIQDLGGSEAYLALLDAAVSCLSEAIRELRTMGQFIDASLFFKEGLEILERIPETPRRCNLEI 2025
GV +V+ELDF LRKLV+TSCSGSP+FI E+CQSLCS G+Q V TSS K+RA LK TG +G + P SV E+VAARID L++T LVLK MS AYGMLLHS RW LHY V +T G +S MVLARHW+QVA G+PS EI DLG + EL MGQFIDASL+F +GLE+L+R+ +TPRR LEI
Sbjct: 152 GVTCRLLEVDELDFALRKLVLTSCSGSPLFITELCQSLCSTRGVQKVSTSSGKSRAALKTTGKDGGLSTGPRSVAEMVAARIDTLESTASLVLKVAAVIGEKFTLNVLYAVFPVDVDEATLATHLNSLVSKNFLAVENPSAMMQGTLCFKFKHSLMSAAAYGMLLHSNRWKLHYRVAVVLTEQGDQSYMVLARHWVQVALGNPSAAEIADLG-------------------VGELMGMGQFIDASLYFNDGLEVLKRMADTPRRKCLEI 401
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: D8LQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG2_ECTSI) HSP 1 Score: 185 bits (469), Expect = 5.080e-46 Identity = 113/275 (41.09%), Postives = 150/275 (54.55%), Query Frame = 1
Query: 2704 ISIVKKEPTPATCASGYQAARILHQWSKARSICDLWDTLQQQPPLSDASLNLCANCIIVLYSAVTNYPSEE---SGVAGSLPSSVKNTPESLQRGTGFGTRQY---------DNRAVDVYHPIKLYCKGDIEVGMQIKDEIAMREGKIPPSQEDQQRWMERHKLASKMFLEAATSSAQTGNGLMEVRARTAYAQVTWTHLHEEDTARLSLRSIFDKFDTLCSQPNFFTPLRLTGLTSAMHLNSDMGGCYSSDESDVDSDEYGF-RQAMEDGSDSS 3489
+SIV+ +PTPA CA+ YQAAR+L W +AR LWD L +A N A + YP E ++ +L T + R +R + ++ VD+Y I L+CKGD E+G + + + P ++ + +E +LA+++F +AA +A GNGLMEVRA A A++ W L + AR LR IFDKFDTLCS PNFFTPLRL GLT+AM LNSDMGGCY D D+DEYGF ED DSS
Sbjct: 1 MSIVRSQPTPAACAAVYQAARLLRLWDRARESLQLWDALPTFESSEEARRNANAGASDATFDVAAVYPPIEITADTISSALRPQAYPTDSRMTRSISTDSRGHLDADDGDLAEDVPVDIYGCILLFCKGDTEMGEVVDERRPTGDATSPAREQADELQLENTRLAAELFAKAADGAALIGNGLMEVRASCACARLLWETLDQGPDARRRLRQIFDKFDTLCSLPNFFTPLRLAGLTAAMRLNSDMGGCYE-DGDTSDNDEYGFGAMHAEDSDDSS 274
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A6H5KP65_9PHAE (DEP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP65_9PHAE) HSP 1 Score: 103 bits (257), Expect = 3.250e-22 Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 688 ASYGFKRFGDASDDGAFGFESADSLTLDAAEILCKEMKEGVEVADRDYGTAVFKNAFVGKEAVDWMLTKDVAGSRAEAVAIGQRLVEFGMVEQLNSAYR 984
A Y F+RF + FESA L +AAE LC +M+ + + DRDYG+ +FK +FVG +AVDWM +A SR EAVAIGQRLVEFG+V+ +NS +R
Sbjct: 24 AGYRFQRFEGEGGEDESQFESAMLLDFEAAEFLCLKMRSCIPIEDRDYGSTIFKKSFVGSQAVDWMCDTGIAASRKEAVAIGQRLVEFGLVDHVNSVFR 122
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A6G3ZCE9_9CYAN (Mechanosensitive ion channel (Fragment) n=1 Tax=Leptolyngbya sp. SIO1D8 TaxID=2607807 RepID=A0A6G3ZCE9_9CYAN) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 745 ESADSLTLDAAEILCKEMK--EGVEVADRDYGTAVFKNAFVGKEAVDWMLTKDVAGSRAEAVAIGQRLVEFGMVEQLNSAYRFVDGELYFEF 1014
E D+ T D + L +M+ +GV++ DR +G V++N FVG +AV WM+ +A SR EA+ +GQ LVE G++ + + F D L++ F
Sbjct: 465 EHGDTTTSDEIQELVTQMRGIDGVDIRDRRFGLQVYRNCFVGSDAVQWMMQHQLA-SREEAIRLGQLLVERGIIHHVTDEHSFQDTYLFYRF 555
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A7S2E9S8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E9S8_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.030e-7 Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 751 ADSLTLDAAEILCKEMKEGVEVADRDYGTAVFKNAFVGKEAVDWMLTKDVAGSRAEAVAIGQRLV-EFGMVEQLNSAYRFVDGELYFEFQDSNTSWKKAVEMDLDAAKALG 1080
+D L EIL + ++ V+V+ + Y +K+ FVG EAVD++++ +VA SR +AV +G+ L E+G+ E + + F DG+L++ F D +K MD + LG
Sbjct: 2 SDDLDKSLDEIL-EAFRKNVKVSTKKYNLQTYKDVFVGSEAVDYLVSSNVASSREDAVILGKSLANEYGLFEHVTRDHEFSDGKLFYRFLDGQRGKRK---MDDGTGERLG 108
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A6P0WXT8_9CYAN (Mechanosensitive ion channel protein (Fragment) n=1 Tax=Caldora sp. SIO3E6 TaxID=2607806 RepID=A0A6P0WXT8_9CYAN) HSP 1 Score: 58.9 bits (141), Expect = 1.300e-6 Identity = 30/79 (37.97%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 784 LCKEMKE--GVEVADRDYGTAVFKNAFVGKEAVDWMLTKDVAGSRAEAVAIGQRLVEFGMVEQLNSAYRFVDGELYFEF 1014
L K+M+ G+E+ DR Y ++N FVG EAV W++ K ++AEA+ +GQ LVE ++ + + F DG L++ F
Sbjct: 41 LIKQMRGEGGLEITDRKYRLKFYRNCFVGFEAVKWLM-KTQKATQAEAIRLGQMLVEQKVIHHVEDQHDFKDGYLFYRF 118
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Match: A0A835WVW9_9CHLO (DEP domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WVW9_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 5.130e-6 Identity = 35/96 (36.46%), Postives = 50/96 (52.08%), Query Frame = 1
Query: 784 LCKEMKEGVEVADRDYGTAVFKNAFVGKEAVDWMLTKDVAGSRAEAVAIGQRLVEFGMVEQLNSAYRFVDGELYFEFQD-----SNTSWKKAVEMD 1056
L ++ GV V DR Y ++ FVG+EAV W++ A AEAVA+G ++E G+ + +RF D L++ F D SNT KA D
Sbjct: 12 LAAALRRGVRVKDRRYLFRCYRACFVGQEAVAWLVAAGAAAGAAEAVALGNSMMEAGLFHHVVYEHRFEDDYLFYRFTDDDHVSSNTDSLKASNAD 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig269.7357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig269.7357.1 >prot_H-paniculata_contig269.7357.1 ID=prot_H-paniculata_contig269.7357.1|Name=mRNA_H-paniculata_contig269.7357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1268bp MAPIQVQSEGSMRPKGKSYDIEVFQLRTATRRSSEVMRKTMLQQYIQRGPback to top mRNA from alignment at H-paniculata_contig269:6438..30277- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig269.7357.1 ID=mRNA_H-paniculata_contig269.7357.1|Name=mRNA_H-paniculata_contig269.7357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=23840bp|location=Sequence derived from alignment at H-paniculata_contig269:6438..30277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig269:6438..30277- >mRNA_H-paniculata_contig269.7357.1 ID=mRNA_H-paniculata_contig269.7357.1|Name=mRNA_H-paniculata_contig269.7357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7608bp|location=Sequence derived from alignment at H-paniculata_contig269:6438..30277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |