mRNA_H-paniculata_contig2643.7215.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2643.7215.1
Unique NamemRNA_H-paniculata_contig2643.7215.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: D7G3I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I6_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 3.440e-150
Identity = 310/543 (57.09%), Postives = 336/543 (61.88%), Query Frame = 3
Query:  273 ATLLERLASTEAKFLRERASTEALRGALSALQRRAAAAADTRDVSCG-GPTANTPRDSCNRGASSSAGVIDADSSENLRGDSRDGTGSRGRGGETDGCRPGERPPWKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVV----------SSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTAS-GHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHVEAH 1865
            A L+ RL STEA    ERAS +AL   L  L+   A AA       G     ++PR   N    SSAG      +E  R           R G  +  RP  RPPW+N+LYKRQPY DNHVP SFLEKLVTNAYVRQPDLRLYV+NTFAVTQQISAVTLFLVVFM  QDGLIS+ TMVMVDLLLLFGGYATVFLVSPK +   +      G    SLAR  G +  +  DP+     +               +S  TAAGL+  DG  L++LSL SVSSTLASF LFLAILRIMAPVLRTLTVSYS DTIYALAVT SFLHLAFHDYSYANT+S GH                                                                                      FQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLL+++HPTLF AY+GTVVLVT ACPLWLLRVQRYKLRIEGPWDIAHVEAH
Sbjct:   13 AHLVSRLESTEALLAEERASNQALSDELLRLRAGGATAAXXXXXXDGYDKDYDSPRPRPN----SSAGTPVEGGTERAR-----------RQGRAEEERP--RPPWQNVLYKRQPYADNHVPGSFLEKLVTNAYVRQPDLRLYVINTFAVTQQISAVTLFLVVFMRTQDGLISVGTMVMVDLLLLFGGYATVFLVSPKRN--NAGISGVNGAAPGSLARLKGRIKHEGDDPYGRGGGSXXXXXXGVPLGNDEGASPRTAAGLA--DGNGLDDLSLSSVSSTLASFFLFLAILRIMAPVLRTLTVSYSDDTIYALAVTLSFLHLAFHDYSYANTSSSGH--------------------------------------------------------------------------------------FQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLYLRHPTLFTAYLGTVVLVTVACPLWLLRVQRYKLRIEGPWDIAHVEAH 448          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: W7U9H2_9STRA (Phosphatidylinositol n-acetylglucosaminyltransferase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9H2_9STRA)

HSP 1 Score: 189 bits (480), Expect = 5.750e-50
Identity = 148/428 (34.58%), Postives = 193/428 (45.09%), Query Frame = 3
Query:  597 LYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGG----IPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPT--GLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHVEA 1862
            LY RQP+PDNHVP SFL+KLVTN  V +P L    +   AVTQQIS V +FL+ F++     +S+  ++  D +LL GGY+    V P+                                                                L   ++ ST+    L  A LRI+APVLRTLTVSYS DTIYALA+  S LHL F+DY  A  +      +  +    L  +   GG         RP +   G         R EP          + + +P                        F GT SLNAA FAAVLLASRLESNE+VFG V  A++LFAFFPL     +R S+ LH  V   +V      L +  +H +L   Y+  V  V+F CP+WL  + +YK  I+GPWD+A VE 
Sbjct:    3 LYIRQPFPDNHVPDSFLDKLVTNGGVSRPKLIPIFLGATAVTQQISVVVIFLMAFVYSYRKSLSLPLVLATDAVLLVGGYSLAACVHPR--------------------------------------------------------------RMLCFHTLLSTILWVSLCAACLRIVAPVLRTLTVSYSDDTIYALALLLSGLHLVFYDYGAAWPSQSSSSPSGLSADSSLDLNVSEGGGIGASVNGNRPNLPEAGA-------ARDEPG------AAAALLASPA----------------------HFHGTFSLNAAFFAAVLLASRLESNEEVFGFVFLAIQLFAFFPLGHHLARRRSMTLHLLVALGLVATATCALAMAPEHRSLLVMYLMGVGFVSFVCPVWLQHIHKYKFTIQGPWDVASVEG 333          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: A0A7S2DRA0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRA0_9STRA)

HSP 1 Score: 164 bits (415), Expect = 6.360e-41
Identity = 147/445 (33.03%), Postives = 201/445 (45.17%), Query Frame = 3
Query:  585 WKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERP------------EIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVT----SAMVLPTGLLLFVKH-----PTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHV 1856
            W+ +L+K+QP+PDN+VP+SFLE LVTNA +R   L   V+N   V QQ+SAV LF +VF + QD   S +          FG + T                            CD  + F      D   +  G + +  G     SG                 L +F+LF+A++R+ +P+LRTLT SYS DTIYALAV  + +HL  HDY+                     C+  + G   VE P            +I G G R V          HH   +   +                               G LSLNAA+FAAVLLASRL SNE+VFGL++ A+ELFA  P AR ++  +    +  VT    + +V  T +LL ++       +   AY   VVL+T  CPL L+ +Q+ KL I+GPWDIAHV
Sbjct:   11 WQKVLWKQQPFPDNYVPESFLEHLVTNANLRPVALLPMVLNALTVAQQMSAVILFGIVFQYCQDSPHSDS----------FGTFIT---------------------------SCDARVMF-----LDGVILLIGLLATQ-GRHVAFSG---------------RWLRNFVLFVALMRVGSPLLRTLTTSYSDDTIYALAVALAAVHLTTHDYA--------------------TCAINLVG--RVEEPMNSRQQRGGGEHQIGGGGQRPVEFS-----GEHHRYQRNQSTNAGDXXXXXXX--------------------GALSLNAAMFAAVLLASRLHSNERVFGLMVLAVELFALLPEARCQLSANHSRANGVVTVILSAGVVTVTSILLALRAWGEAMQSTLVAYGFAVVLITLVCPLCLVHIQKRKLNIQGPWDIAHV 350          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: UPI0006448E5A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448E5A)

HSP 1 Score: 153 bits (387), Expect = 3.830e-37
Identity = 123/427 (28.81%), Postives = 172/427 (40.28%), Query Frame = 3
Query:  585 WKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKC---SMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHV 1856
            WK +LY+ QPYPDN+  ++FL++L+ NA   + D    V ++F VTQQI++V LF++VF H      +++++V + + +L  GY  +  + P     S+  S  H                                  V+  FGT  GLS                                 PVLRTLT S+S DTI+AL       HL FHDY Y N                                                                                        C  F   +SLNAAIFA+VLL+SRL SN  VF L+ FA+++FA FP+ R  +KRHSL  H+ +T  + +   +LL      L   Y+G +  +TF CPLWL+ +Q+YK  I GPWD A V
Sbjct:   78 WKKVLYEPQPYPDNYTDETFLKELIQNANFIKYDFWKIVFDSFTVTQQITSVILFVIVFFHALKSTWTLSSLVSMAMGMLVVGYILIIWIDPTSDFYSIKDSLLH----------------------------------VILLFGTVYGLS---------------------------------PVLRTLTNSFSDDTIWALTFILLLAHLFFHDYGYTNND--------------------------------------------------------------------------------------CTVFNAPISLNAAIFASVLLSSRLHSNIHVFVLITFAIQMFALFPIVRHHIKRHSLEFHSGLTIGLCVACTVLLSHMSTLLTFIYIGIIGTITFVCPLWLIFIQKYKNEINGPWDEASV 351          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: D3BEN2_POLPP (GlcNAc transferase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BEN2_POLPP)

HSP 1 Score: 153 bits (387), Expect = 1.280e-36
Identity = 123/424 (29.01%), Postives = 170/424 (40.09%), Query Frame = 3
Query:  585 WKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHV 1856
            W+ ILY++Q +PDNH  ++FL +L+ NA   + D    V+++F VTQQI+ V LF++VF H     +++  +V + ++LL  GY  + ++ P      S  H                                  V+  FGT   LS                                 PVLRTLT S+S DTI+AL       HL FHDY Y N  S                                                                                       +F   +SLNAAIFA+VLL SRL SN  VF L+ ++++ FA FP+AR  +KRHSL LH  +T  + +   LLL      L   Y+G V+ +TF CPLWL+ +Q+YK  I GPWD A V
Sbjct:   61 WRKILYEQQAFPDNHTDETFLIELIQNANFIKYDFWKIVIDSFTVTQQITCVILFVIVFFHSLKHTLTLRFLVSLAMVLLVLGYIVIIIIDPTSDY--SILH----------------------------------VILLFGTVYALS---------------------------------PVLRTLTNSFSDDTIWALTFILLLAHLFFHDYGYTNNEST--------------------------------------------------------------------------------------KFSAPISLNAAIFASVLLGSRLPSNIHVFVLITYSIQTFALFPIARHHIKRHSLELHVGLTVILCITCSLLLLGMSTLLSFFYIGIVMTITFICPLWLIFIQKYKNEINGPWDEASV 329          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: A0A151ZAL3_9MYCE (GlcNAc transferase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAL3_9MYCE)

HSP 1 Score: 147 bits (371), Expect = 2.370e-35
Identity = 122/426 (28.64%), Postives = 176/426 (41.31%), Query Frame = 3
Query:  585 WKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHVEA 1862
            W+ ILY++Q Y DN+  ++FL  LV NA   + D    V+++F V+QQISAV LF+++F H     +++  ++ + ++LL  GY  +  + P  +                               F++ + +   V+  FGT   LS                                 PVLRTLT S+S DTI+AL        L FHDY Y N  S     T+F+                                                     APV                            SLNAAIFA+VLL SRL SN  VF L+ +A+E+FA FP+ R  +KRHSL +H  +T  +    G LL   +  L   Y+G + ++TF CP+WL+ +Q+YK  I GPWD A V +
Sbjct:   43 WRKILYEKQAYSDNYTDETFLVGLVQNANFIKYDFWTVVMDSFTVSQQISAVILFVILFFHALRQTLTLPVLLSMGVVLLVAGYIVISFIDPTSN-------------------------------FESIKDSILHVILLFGTVYALS---------------------------------PVLRTLTNSFSDDTIWALTFILLLASLFFHDYGYTNNES-----TKFS-----------------------------------------------------APV----------------------------SLNAAIFASVLLGSRLTSNIHVFVLISYAIEIFALFPIVRHHLKRHSLEMHVGLTIILCTTCGTLLMGLNTLLALVYIGIINVITFVCPIWLIFIQKYKNEINGPWDEASVTS 318          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: F0ZLB7_DICPU (Uncharacterized protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZLB7_DICPU)

HSP 1 Score: 145 bits (366), Expect = 3.190e-35
Identity = 123/424 (29.01%), Postives = 169/424 (39.86%), Query Frame = 3
Query:  585 WKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHV 1856
            WK  LY++QPYPDN+  ++FL  LV NA   + D    V+++F V+QQI++V LF ++F H     +S+  ++      L  GY  + ++ P  +                               F + R +   ++  FGT  GLS                                 PVLRTLT S+S DTI+AL       HL FHDY + N  S  F A                                                          PV                            SLNAAIFA+VLL SRL SN  VF L+ +A+E+FA FP+ R  +KRHS+ LH  +T  + +   LLL      L   Y+G +  +TF CPLWL+ +Q+YK  I GPWD A V
Sbjct:    2 WKKNLYEKQPYPDNYTDETFLIGLVQNANFIKYDFWTVVLDSFTVSQQITSVILFAIIFFHSLKHTLSLPILLGTAGAFLTLGYIAIIIIDPSSN-------------------------------FLSIRSSLLHIILLFGTVYGLS---------------------------------PVLRTLTNSFSDDTIWALTFILLLAHLFFHDYGFTNNESQKFSA----------------------------------------------------------PV----------------------------SLNAAIFASVLLGSRLPSNIHVFVLISYAIEIFALFPIFRHHLKRHSVELHVVLTIILCITCSLLLLGMSKLLALIYMGIICTITFVCPLWLIWIQKYKNEINGPWDEASV 275          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: PIGC_DICDI (Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=PIGC_DICDI)

HSP 1 Score: 143 bits (361), Expect = 7.990e-34
Identity = 123/424 (29.01%), Postives = 168/424 (39.62%), Query Frame = 3
Query:  585 WKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHV 1856
            WK  LY++QPY DN+  ++FL  LV NA   + D    V+++F V+QQI++V LF ++F H     +++  +V +    L  GY  + ++ P  +                               F + R +   ++  FGT  GLS                                 PVLRTLT S+S DTI+AL       HL FHDY Y N  S  F A                                                          PV                            SLNAAIFA+VLL SRL SN  VF L+ +A+E FA FP+ R  +KRHS+ LH  +T  + +   LLL      L   Y+G +  +TF CPLWL+ +Q+YK  I GPWD A V
Sbjct:   64 WKKNLYEKQPYSDNYTDETFLIGLVQNANFIKYDFWTVVLDSFTVSQQITSVILFAIIFFHSLKHTLTLPFLVAMAGGFLVLGYIAIIIIDPSAN-------------------------------FLSIRSSFLHIILLFGTVYGLS---------------------------------PVLRTLTNSFSDDTIWALTFILLLAHLFFHDYGYTNNESQKFSA----------------------------------------------------------PV----------------------------SLNAAIFASVLLGSRLPSNIHVFVLISYAIETFALFPIFRHHLKRHSMELHVGLTVILCVTCSLLLLGMSKLLALIYIGIIGTITFVCPLWLIFIQKYKNEINGPWDEASV 337          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: A0A8J4V780_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V780_9MYCE)

HSP 1 Score: 144 bits (364), Expect = 2.000e-33
Identity = 118/424 (27.83%), Postives = 171/424 (40.33%), Query Frame = 3
Query:  585 WKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQPDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFGGYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARVARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHV 1856
            W+  LY++Q + DN+  ++FL  LV NA   + D    V+++F V+QQI++V LF+++F H     +S+  +V +  + L  GY  + ++ P  +                               F+T + +   VV  FGT  GLS                                 PVLRTLT S+S DTI+AL       HL FHDY Y N  +                                                                                      ++F   +SLNAAIFA+VLL SRL SN  VF L+ +A++ FA FP+ R  +KRHS+ LHA +T  + +    LL      L   YVG ++ +TF CP+WL+ +Q+YK  I GPWD A V
Sbjct:  156 WRKNLYEKQSFADNYTDETFLIGLVQNANFMKYDFWTVVLDSFTVSQQITSVILFVIIFFHSLKYTLSLPFLVGMAGIFLVLGYIVLIIIDPTSN-------------------------------FNTIKDSILHVVLLFGTVYGLS---------------------------------PVLRTLTNSFSDDTIWALTFILLLAHLFFHDYGYTNNET--------------------------------------------------------------------------------------VKFSAPISLNAAIFASVLLGSRLASNTHVFMLITYAIQTFALFPILRHHLKRHSMELHAGLTVILCVTCSALLLGMSTLLALIYVGIIITITFVCPIWLIWIQKYKNEINGPWDEASV 429          
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Match: A0A7S3UQW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQW9_HETAK)

HSP 1 Score: 133 bits (335), Expect = 3.990e-31
Identity = 100/261 (38.31%), Postives = 134/261 (51.34%), Query Frame = 3
Query: 1083 LASFLLFLAILRIMAPVLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWRGLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIEAPVLLHLSCYTVLRFHVAVACMA---CLQFQGTLSLNAAIFAAVLLASRLESNEKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVKHPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHV 1856
            L SFLLF+ ILR  AP+L+TLT+SY+ D+IYALAV    L+L F+DYS             F    G  C    G  P     ++       +    +    +        G+                    A++  +     +F+G LSLNAA+F AVLLASRL+SNE VFG +L A+ELFAF P ARR +K+ S  L A VT  +V  T +LL  +  T+F  Y   VV V+  CP+ L  +++YK  I GPWDIA V
Sbjct:   18 LGSFLLFVEILRAAAPLLKTLTISYADDSIYALAVVCFGLNLTFYDYS----------TPRFLEDFGDDCKHD-GNTPHCINDQLKLQDQNGIKDMAVDDNSKPQSSVASTGAXXXXXXXXXXXXXXXXXXXEALSNSSNPHSQRFRGALSLNAAMFGAVLLASRLQSNELVFGFILCAIELFAFSPDARRTIKQCSKHLDALVTLLLVTVTSVLLIYRDKTIFVVYELFVVFVSIICPICLSAIRKYKCTINGPWDIAKV 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2643.7215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3I6_ECTSI3.440e-15057.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7U9H2_9STRA5.750e-5034.58Phosphatidylinositol n-acetylglucosaminyltransfera... [more]
A0A7S2DRA0_9STRA6.360e-4133.03Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
UPI0006448E5A3.830e-3728.81hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BEN2_POLPP1.280e-3629.01GlcNAc transferase n=1 Tax=Polysphondylium pallidu... [more]
A0A151ZAL3_9MYCE2.370e-3528.64GlcNAc transferase n=1 Tax=Tieghemostelium lacteum... [more]
F0ZLB7_DICPU3.190e-3529.01Uncharacterized protein (Fragment) n=1 Tax=Dictyos... [more]
PIGC_DICDI7.990e-3429.01Putative phosphatidylinositol N-acetylglucosaminyl... [more]
A0A8J4V780_9MYCE2.000e-3327.83Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A7S3UQW9_HETAK3.990e-3138.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2643contigH-paniculata_contig2643:8823..16239 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.0
Seed ortholog evalue6.8e-126
Seed eggNOG ortholog2880.D7G3I6
Preferred namePIGC
KEGG rclassRC00362,RC01004,RC01101,RC02869
KEGG koko:K01266,ko:K03859,ko:K12737,ko:K17841
KEGG ReactionR02065,R03824,R04218,R05341,R05916,R07270,R10508
KEGG Pathwayko00563,ko00906,ko01100,ko01110,map00563,map00906,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000506,GO:0000902,GO:0000904,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007275,GO:0007399,GO:0007423,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009653,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009887,GO:0009932,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016254,GO:0016740,GO:0016757,GO:0016758,GO:0017176,GO:0019538,GO:0019637,GO:0022008,GO:0022414,GO:0030154,GO:0030182,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032989,GO:0032991,GO:0034645,GO:0036211,GO:0040007,GO:0042051,GO:0042052,GO:0042157,GO:0042158,GO:0042175,GO:0042461,GO:0042462,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045017,GO:0045313,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0046530,GO:0048468,GO:0048513,GO:0048588,GO:0048589,GO:0048592,GO:0048666,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048868,GO:0048869,GO:0051704,GO:0060560,GO:0071704,GO:0071840,GO:0090407,GO:0090596,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234
EggNOG free text desc.phosphatidylinositol N-acetylglucosaminyltransferase activity
EggNOG OGsKOG3059@1,KOG3059@2759
Ec32 ortholog descriptionPhosphatidylinositol N-acetylglucosaminyltransferase subunit C
Ec32 orthologEc-19_004740.1
EC2.5.1.32,3.4.11.19,5.2.1.8,5.5.1.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03041,ko03110
Exons7
Model size2545
Cds size1794
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929791.2048879-UTR-H-paniculata_contig2643:8822..89021622929791.2048879-UTR-H-paniculata_contig2643:8822..8902Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2643 8823..8902 +
1691481012.3163595-UTR-H-paniculata_contig2643:8822..89021691481012.3163595-UTR-H-paniculata_contig2643:8822..8902Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2643 8823..8902 +
1622929791.3581817-UTR-H-paniculata_contig2643:15568..162391622929791.3581817-UTR-H-paniculata_contig2643:15568..16239Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2643 15569..16239 +
1691481012.406157-UTR-H-paniculata_contig2643:15568..162391691481012.406157-UTR-H-paniculata_contig2643:15568..16239Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2643 15569..16239 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929791.2331462-CDS-H-paniculata_contig2643:8902..94881622929791.2331462-CDS-H-paniculata_contig2643:8902..9488Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 8903..9488 +
1691481012.3303597-CDS-H-paniculata_contig2643:8902..94881691481012.3303597-CDS-H-paniculata_contig2643:8902..9488Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 8903..9488 +
1622929791.251584-CDS-H-paniculata_contig2643:11101..112351622929791.251584-CDS-H-paniculata_contig2643:11101..11235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 11102..11235 +
1691481012.3417854-CDS-H-paniculata_contig2643:11101..112351691481012.3417854-CDS-H-paniculata_contig2643:11101..11235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 11102..11235 +
1622929791.2824886-CDS-H-paniculata_contig2643:11802..119521622929791.2824886-CDS-H-paniculata_contig2643:11802..11952Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 11803..11952 +
1691481012.3534832-CDS-H-paniculata_contig2643:11802..119521691481012.3534832-CDS-H-paniculata_contig2643:11802..11952Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 11803..11952 +
1622929791.3029773-CDS-H-paniculata_contig2643:12574..127411622929791.3029773-CDS-H-paniculata_contig2643:12574..12741Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 12575..12741 +
1691481012.3620362-CDS-H-paniculata_contig2643:12574..127411691481012.3620362-CDS-H-paniculata_contig2643:12574..12741Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 12575..12741 +
1622929791.319028-CDS-H-paniculata_contig2643:13043..131821622929791.319028-CDS-H-paniculata_contig2643:13043..13182Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 13044..13182 +
1691481012.3742054-CDS-H-paniculata_contig2643:13043..131821691481012.3742054-CDS-H-paniculata_contig2643:13043..13182Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 13044..13182 +
1622929791.3298216-CDS-H-paniculata_contig2643:14299..146851622929791.3298216-CDS-H-paniculata_contig2643:14299..14685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 14300..14685 +
1691481012.3836584-CDS-H-paniculata_contig2643:14299..146851691481012.3836584-CDS-H-paniculata_contig2643:14299..14685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 14300..14685 +
1622929791.342219-CDS-H-paniculata_contig2643:15336..155681622929791.342219-CDS-H-paniculata_contig2643:15336..15568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 15337..15568 +
1691481012.3932452-CDS-H-paniculata_contig2643:15336..155681691481012.3932452-CDS-H-paniculata_contig2643:15336..15568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2643 15337..15568 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2643.7215.1prot_H-paniculata_contig2643.7215.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2643 8903..15568 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2643.7215.1

>prot_H-paniculata_contig2643.7215.1 ID=prot_H-paniculata_contig2643.7215.1|Name=mRNA_H-paniculata_contig2643.7215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=598bp
MNISGIEEVTSAAVESSSPSTRSGVGEEPIITPDQDSSSSNNSSGSLNIN
TDRSPTSRAHDANIATLLERLASTEAKFLRERASTEALRGALSALQRRAA
AAADTRDVSCGGPTANTPRDSCNRGASSSAGVIDADSSENLRGDSRDGTG
SRGRGGETDGCRPGERPPWKNILYKRQPYPDNHVPQSFLEKLVTNAYVRQ
PDLRLYVVNTFAVTQQISAVTLFLVVFMHMQDGLISMTTMVMVDLLLLFG
GYATVFLVSPKCSMVQSSTHEREGKGTPSLARCDGGLGFKAGDPFDTARV
ARGTVVSSFGTAAGLSGDDGEALEELSLFSVSSTLASFLLFLAILRIMAP
VLRTLTVSYSSDTIYALAVTFSFLHLAFHDYSYANTASGHFQATEFNHWR
GLLCSFRVGGIPTVERPEIAGPGVRSVSSELLRKEPRHHYLNKRYGSFIE
APVLLHLSCYTVLRFHVAVACMACLQFQGTLSLNAAIFAAVLLASRLESN
EKVFGLVLFALELFAFFPLARREVKRHSLLLHASVTSAMVLPTGLLLFVK
HPTLFAAYVGTVVLVTFACPLWLLRVQRYKLRIEGPWDIAHVEAHHI*
back to top

mRNA from alignment at H-paniculata_contig2643:8823..16239+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2643.7215.1 ID=mRNA_H-paniculata_contig2643.7215.1|Name=mRNA_H-paniculata_contig2643.7215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7417bp|location=Sequence derived from alignment at H-paniculata_contig2643:8823..16239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACAAGAGTTGTCATCCGACTTTGGGTTGACGACGGCAGGGACTGCCCGC GTCGTGTTCGAGTGGATATGCGTGTGTGCCATGAACATATCCGGCATAGA AGAAGTTACTTCGGCTGCAGTTGAGTCTTCGTCTCCGTCAACTCGCTCCG GCGTTGGTGAAGAGCCAATAATTACACCCGACCAGGACAGCAGCAGCAGC AACAACAGCAGCGGGAGCCTTAACATCAACACTGACAGGAGCCCTACCAG TCGCGCTCACGACGCAAACATTGCAACCCTACTCGAGCGTTTAGCCTCGA CAGAGGCAAAGTTTCTCCGAGAACGAGCCTCTACTGAAGCTCTTCGCGGC GCACTGAGTGCGCTGCAACGTAGAGCAGCGGCGGCGGCGGATACAAGAGA TGTTAGCTGTGGCGGACCAACTGCAAACACACCACGGGACAGCTGTAATC GCGGGGCCAGCTCCAGTGCTGGGGTGATAGATGCGGACTCAAGCGAGAAT TTGCGTGGTGACAGTCGCGACGGCACGGGGAGCAGGGGACGAGGCGGGGA GACTGATGGATGTCGGCCAGGAGAGAGGCCGCCATGGAAGAATATTCTGT ACAAGAGGCAACCTTATCCAGACAATCATGTCCCACAGTCCTTCCTTGAG AAGCTTGTGACTAACGGTGAGTGAGAAGAAAGTTTAGTGTAGCATCGAAC AAGTAACTCGTAGGCTTCAACTAATGCACAGCAAGTCCTGTAGAACATTT AGTAGCACACTTAAGAAAAGGAGGCTGATATGGTTCGCTTGTGATGACCA GACAAACAGTACTGTACGCGACGGCTCGAGCGTGGATTGTAACGAAAGGT ACGGTGAGCACCTGCGTAGTTATCTCTCCTGTTAAGGCACCACTCTGCAC TGCTCTCTGTTCAACTTATTACTGTACTGTACTGTCTATCTGCCTGTTGG CCTCTACTGCTGCTGTAGCGTCTGTGGCATTTCTCCACGCCTTAACTTGG TGCTCTCTCTGAGAGTCGTCAACTGACCGCCTGTAAATAGAAGGGGGTCC TGCATGCTATGACTTGTGACGCGCGTCCATGTGCACACGGGACCAACCGT TCTAAACCAGTGCTGGGTCGCTCGTGTACCATAGCTCAGTCGCTACGAAC CAAGCTTACTAGACCTTGCGGACCGAAGTTGTGCCGTTGAGAACCAAAAC GTGCATCGTCAATAACGAGTTCCTTGGCAGCTTCCCAGGGAGCTGAATCT GTGAGACAGTGATTCAGGTGACTGATAGCAGGTCACCCGCAGTTGGCGAG TAAGACTCTTTAACCCTTACGGCACCCAGCAGTGTACAATTCCTACTTAT CCCTGGCCGGAAAACAGATCGAAACCCCTTCGGAACTTTTTGTGCCAAAC GCCCGCAAAATGATCACGGGTGCAGGGAGCTCTACAGACAGTACAGACCA CCATCTAATTATTATTACAGACACGCAGGCAGGAGTCACAGGAGTTGGCA TGGCTTTGAGTTTCAAGACAGATAGCAGCACATGATTGAAACGCGAAGCA CAAACCACATGGTGAGTGACTGGCTGTAGGGTGTGTATTGCGCATAGAGA GGCGCGCCAGGACATTTTATCAAACGAACCAGCATATCTCTCACGGCGCT GTTGTGACACCCGCAGACAGCAAAATGCAGAATGATTTGTCACACCACCG CGTATGTGTCGTAGTTGAAAGCATCGGCTGCAGCTGCGGTGGCAAGGTAC TCTGGCATACCATGCGCTCCCGTAGCTCTCTTACTCGCAGTCAATACCAT GCGTCTGTTGTACGCATAAAAAACAACCAGATCAAAAGGATGTCGCCCAA AACAAACACAGCAGCCCAAAAATGAAATGGCCAAGAGTGCAAGAGTGCAC CTTTTGTACTCCCTCAACTGCCTGAGGTATTGTGTAGGGATCCTGACACG TTTTTTATCGGCTGTTCGGTGAACCAACGTGTATGATCGGCCTGACCCTA CTTTTTCCTGTACAAATTGCTGCCATACTTTAGCACTATGCAGTCAGGAG CCACCTCCCCCCCCTTTTCGCGGCGGTTTCACCGCTGGACTGTCACGTGC CTTTCTTGTTCTTCTTCAGGCTTCGGTGCCGTAGGGTTTAGGCCTGGTAG AGCACACATGATGTATTCGTCGGGTCGGTTGGTGTGTTGCCCTTAATGCA GCACTTGTAACCGCGCGTGTCCGTTAACACATGTGATTGCTTCTCATATT TTATTCCGTTTGTCTTTATTTTTTTCTAGCGTATGTTCGGCAGCCCGATC TACGGCTGTACGTGGTGAATACGTTCGCGGTCACGCAGCAAATCTCGGCG GTCACTCTGTTCCTGGTGGTGTTTATGCATATGCAAGATGGCCTCATCTC GATGACGACGATGGTGAGCTTTATCTTTGTTTTACTGGTGCGGTGATGAG GGTTTCGGTGAGTATCGTTGTGCTTGACTGTGTGCGCCGACTATACTGTA ACGCTTATCTGACCGATTTGGAGCCAGCCGATTGTAGACGCAAATTGATA ATTCCATTTGTTGAAAACTCGAAGGTAAGATGTGCGAGCGTGTAGATCGT AGTCGCATGGTGCACTTGTTCTCAAGAGTGAGTAAACGTGCACACCATTG CGCTGTGTTTTAGCAGCTGTCCTTGAGGTTTTGCACCGGGTGCTCTCGAG TGTTGTGGCGTCACTGGCAGCACGTACAGCTGCGCCCGTGTGTTTATAGT AGTTTCTGTTTGTCCTGGTACCCATCGACTGTAGTCAAACCCGTAACCAA TCTATGCGCCCCCCTGCGCTGGCAAAGTAGGTCTATCGATCGTAAATATT CGCTGTTTACATAGCAGTCGAGTGTAGACTTTGAAAACTCTTCCGAAATG AAGACCACACCATCATGACCAGCTACCGTGTTAAATATTGGCGCATTTCA TGCTCGATCATGCAATCGTCGTTGGCCCAGGTGATGGTAGATCTGCTGCT TCTCTTCGGCGGTTATGCTACTGTCTTCCTTGTGTCTCCTAAGTGCTCTA TGGTGCAATCGTCCACGCACGAGAGGGAGGGGAAGGGAACGCCGTCGCTT GCTCGATGTGACGGCGGGCTTGGCTTCAAGGTATAGTAGCGAGTCTCGTG GTCTTTATTTTCTTGGTACAATGATAGCTTGGCCTCATTTGGCCCACAGG ATAGACTCTTCGGGAGAGGAAAATGTAAATAGCAATGCCGTTGCGGCACA TTGCCAATTTTAATGAAGTATAGTTTTCTCTGTAGTCTCCTTGTTTTTTG TCATCTCGGATTAATCGTCCATATGTTTGTTTTTTTGTTCTTCTCCCCAG GAGACCAAGGGGACCAGCCTTTTAGTGCAAGCTCTGCAGGGCTCCGTCCC TTTACTTTCGCGTTCCGGTGCTGTTAAAATGTCTCCATCGATTTTACCCC AGCCAATACCCGTTCCCCATAGCCTGCAAATAGCTCGTATAGTTTCGGGG GATTATCGTAACACGTTGAGCGCCTATGTGTGTACGATGATGCACAAATG ATGTTTTTTGACTCGTGAATAATTCGGCGACTTGCCATGGCACCACGATT CATATCTCGTGTACTTGAGTATGAATGCTGTTGTGGGTATGGTTGACAAG GTGCCGTAATCTGCTCCTTGCTGCATCTAACGCCCACGCTTGCTGCAGTT GCTGCTGATGTTGTGTTTCTTCTTGCTTTTACTTTTGTTTCTGTTGGCAT AGGCTGGCGACCCCTTCGACACCGCCCGAGTGGCACGCGGAACCGTGGTT TCTTCGTTTGGGACTGCGGCAGGCTTGTCCGGTGATGATGGAGAGGCCCT GGAAGAGCTGTCCCTCTTCTCTGTATCTTCGACCTTGGCATCGTTTTTAT TGTTTCTCGCTATCCTCAGGTGTACTGTCTCACACACTTCTTGTCTTCCC TCTAATCAGACCCGCTTGCCACCTCGAGAATTTGAGAGATACTACATTAG GGTACCATGTGCGGACACAGTATTTTTATTTCTGATCGCATGTCATCACT TCATTCTTTGACCCTTCGTCGACCCTCGTTCGGTCGCCGAGCTCTTTAGT TGTTGGAGTGAAAGGAGTAAGAGGTACCGTTGAATCTCTTTGTGGTGATC GATGTGCGATTGATGTCATGGTTTTCTCATTGTAATGTCGCGGCTCGTGT ATTGATGGTTGCATATTGCAGGATCATGGCCCCTGTCTTGCGGACACTGA CGGTTTCGTATTCAAGCGACACCATCTACGCCCTTGCCGTCACGTTCAGC TTTTTGCACTTGGCATTTCACGACTATTCTTACGCCAACACTGCGTCAGG ACATTTTCAGGTACAGTAACTGAGAAACGCACCACCCTTCAGGTACACAA CCTGAGATAATCTACCATGAATAAAGGTACGAACCTGAGTGCAACTTGAA AAGGACGACGGCAAAAATAGAACAAAGTATGAACAAATTAATAGGGCTCT GCACTGCGCGGTATATGGTACAGTACTGCCGGTACTGGCAGTATATTGAT TCTGCCTTGAACGGTTGCCAGTATCCCATGATATTTGTCAGGTTCTAACC AGAGACATGTCTAGCGACAGAAAGTCAGCGGATAGCAGTTAGAGAAGAAG GCAGTTTCGCTGCTGAAGGAGAGGCAAGAGGCAGAAGATAGGTTACTTCG CAGAGCGATCATTATTATAGTGCTTCCCAAGTCGTTGTGTGACTCTTTAT ATCTAGTATCAAACTCTTGCCTATAATATCGTACACCTGTCCCCGGTGGG CCCAGTATCCAGACGGTCAAAATGTCAACTCAAACAAACCATTGTTAGGC CAATCATCGTTAATGGAACCATGTCCCAATCAACCCACTTTATTGAGGAT TCACGCACGTCATCGTAAAAACGTCTCATTGTTTATTGAAACCCCCCCCT TCATTGATCATTTTCCATTGGCCTTGGACTAAGGGTACAGCGCCGCATAG CGCTGCGGGGGCGTGCAGAGGAGGTATATGCACTCGGCCGGCGGTTTCGG GTCCTACAAGGGTGACGAGTGAGATTGGTTACCGTTACCCAAACATGAAA ATATAGAATTTTCGTTTTTATTGTCACGCGGACAGAGTCAGGCTCTCGAT TTTGAAGAGAGGTGAAGCGAAAACTCTATTTTTTTTTTTGCCTTCAGCGG GGCCTCCAGCCCCCCCCCTTCACCAGCCGGGGGGCACCGTGGCGACTTCG CGTTTTACCGGACGGCAGACGTTTCTAGCATCAGTGTGCGAAAAAAACCC AGTTGGATTATGTCACATTTTGTCAACAGGAAACTTTCAACGAAGTGAGA GCCTCAAACTCGATAGGGACATGTTGGCTGGATTGTTTGGTATTGCATGT AGGCCAACTTACCTAAATAATATGATCAATAGATACCTTACATTCCTGGT ACCTCTCTGCTCCGACGGATAACGCAGGCTACGGAATTCAACCATTGGCG AGGGCTTCTCTGTTCTTTTCGAGTTGGCGGAATTCCAACCGTTGAACGAC CAGAAATTGCAGGACCGGGTGTGCGAAGTGTATCGTCAGAACTTCTGCGT AAAGAGCCTAGACACCATTATCTCAACAAACGATATGGGTCGTTTATTGA AGCACCAGTTCTGTTGCACTTGTCGTGTTATACTGTGTTGCGTTTTCACG TGGCGGTGGCGTGTATGGCATGCCTGCAATTTCAGGGCACGCTGAGCTTA AATGCAGCAATATTCGCGGCGGTGCTGTTGGCGTCTCGTCTGGAATCAAA TGAGAAGGTGTTCGGGTTGGTGCTGTTTGCCCTGGAGCTCTTCGCGTTTT TCCCGCTTGCAAGGTGAATAAACCGTGGGGGGCAGAACTATATACTGGTA CGTCCGTTTAAGTGCCGAACGAGAAATGTCCACGTTTAGGATGATACTGC TATTTACTATCTTGGTACCCTAAGGTCGTGATCGTTGTCGTCATTGTGTT GATTTGGAACCGCTTTTCAATTCTATACTCCAGTTATTATTCAAAGAAAA ATATTCATGAGAGCGTTGCGAGCTACTGCGAGCGCGACAAGTCCCACGGG TCGAGGACAAGCATCAACTACACGGGCGTAGATGTAGGCATACTCTTACT GGTATGGAATCAAGGGGTCAGGATTGCGGGTAGAGTTTTCACGGCTTTGG TTTTTGCTGAAATTTTCCGGCTTGGCTCGAAAATGACTCAAGAGTATTCG CTTGGGTATTAATGCTATGTGACTGCTAGAGTCATACCTAGGCCCATGTA GTCATCCCGGACCTTTGTTCTCGACCCGTGCACAACGACTCGCTGCGCTG ATAGGAAGATCTGGTCTTCAGTAGTTACCTGGGAACCGATTTATAAAACT GTTACGGAACGGTGACGACAACGAGAAGGATCTTACCGTCCTAAGCAAGG AGAATTCCCTAACGCGACGTAATTTTGTTCCGTTTCGTGCTCGGTCCATA TGTCTTGGCTCTAGACGAGAGGTGAAGAGGCATAGCTTGCTGCTGCACGC TTCTGTAACGTCCGCCATGGTGCTGCCAACAGGCTTGCTGCTATTTGTCA AGCATCCCACTCTATTTGCGGCGTACGTGGGCACCGTGGTGCTGGTTACG TTCGCTTGTCCTCTCTGGTTGCTGAGAGTGCAGAGGTATAAACTCCGCAT AGAGGGGCCCTGGGACATTGCGCACGTCGAGGCACATCATATATAGCACG ATATTCGTAGAATAGTTTCCATATTGTATCTATCGCGTTTTCAGTATATC TATAGTCAGTCGAGTTGAACATCGTTTAACCATCGGTGATTGTGATGAAC CATGGATAATAGCACGCGGGAATGGAGGGAGGGAGAGGGGCATTTGCGGA AACCCGAAATATCGTTTCGTACCAATCGTATCCCGGGAATCTCGCAGGTC AAGTCAATGTATCGAGACATCCCACAGAAATGAGCCTCAATTTGTTACAT GCAGAGGTTCAAGCTATGCGTCCGATATGAGGTCAGGATTACTGCTCGAT TCCGTGGATAGTGGCTTCGGTAGCGTTATGTGTGTTTGTGCAAGAGCATG CTCCATACATATGCTGTTTCGGATGATGTTGCAATGTAGGTGTAGATTTT GGCTCCTCAGTGCGTGCCGTTTTGCGTGGCGCAAGAGTGCGTTAGGTGCG AGCACTGTTGGGTCTACTGTGAAATTATGTAGCGGTAATCGTATGTGCAC CCCGGTCTTATGCTGTTTTTCAGTAGTATTTTTGGAAGCATGTTAGTATA TCCACGCTTATCCACGCTCTTGTCTTGACGCGATTCCATCTGGGCCGAGG TTTCGCATGCTTCCGTATGTACCAATAGCCTCATCTCACAGCCCGCATAA CCCTCCGCACAGCGATA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2643:8823..16239+

>mRNA_H-paniculata_contig2643.7215.1 ID=mRNA_H-paniculata_contig2643.7215.1|Name=mRNA_H-paniculata_contig2643.7215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3588bp|location=Sequence derived from alignment at H-paniculata_contig2643:8823..16239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACATATCCGGCATAGAAGAAGTTACTTCGGCTGCAGTTGAGTCTTC
GTCTCCGTCAACTCGCTCCGGCGTTGGTGAAGAGCCAATAATTACACCCG
ACCAGGACAGCAGCAGCAGCAACAACAGCAGCGGGAGCCTTAACATCAAC
ACTGACAGGAGCCCTACCAGTCGCGCTCACGACGCAAACATTGCAACCCT
ACTCGAGCGTTTAGCCTCGACAGAGGCAAAGTTTCTCCGAGAACGAGCCT
CTACTGAAGCTCTTCGCGGCGCACTGAGTGCGCTGCAACGTAGAGCAGCG
GCGGCGGCGGATACAAGAGATGTTAGCTGTGGCGGACCAACTGCAAACAC
ACCACGGGACAGCTGTAATCGCGGGGCCAGCTCCAGTGCTGGGGTGATAG
ATGCGGACTCAAGCGAGAATTTGCGTGGTGACAGTCGCGACGGCACGGGG
AGCAGGGGACGAGGCGGGGAGACTGATGGATGTCGGCCAGGAGAGAGGCC
GCCATGGAAGAATATTCTGTACAAGAGGCAACCTTATCCAGACAATCATG
TCCCACAGTCCTTCCTTGAGAAGCTTGTGACTAACGATGAACATATCCGG
CATAGAAGAAGTTACTTCGGCTGCAGTTGAGTCTTCGTCTCCGTCAACTC
GCTCCGGCGTTGGTGAAGAGCCAATAATTACACCCGACCAGGACAGCAGC
AGCAGCAACAACAGCAGCGGGAGCCTTAACATCAACACTGACAGGAGCCC
TACCAGTCGCGCTCACGACGCAAACATTGCAACCCTACTCGAGCGTTTAG
CCTCGACAGAGGCAAAGTTTCTCCGAGAACGAGCCTCTACTGAAGCTCTT
CGCGGCGCACTGAGTGCGCTGCAACGTAGAGCAGCGGCGGCGGCGGATAC
AAGAGATGTTAGCTGTGGCGGACCAACTGCAAACACACCACGGGACAGCT
GTAATCGCGGGGCCAGCTCCAGTGCTGGGGTGATAGATGCGGACTCAAGC
GAGAATTTGCGTGGTGACAGTCGCGACGGCACGGGGAGCAGGGGACGAGG
CGGGGAGACTGATGGATGTCGGCCAGGAGAGAGGCCGCCATGGAAGAATA
TTCTGTACAAGAGGCAACCTTATCCAGACAATCATGTCCCACAGTCCTTC
CTTGAGAAGCTTGTGACTAACGCGTATGTTCGGCAGCCCGATCTACGGCT
GTACGTGGTGAATACGTTCGCGGTCACGCAGCAAATCTCGGCGGTCACTC
TGTTCCTGGTGGTGTTTATGCATATGCAAGATGGCCTCATCTCGATGACG
ACGATGCGTATGTTCGGCAGCCCGATCTACGGCTGTACGTGGTGAATACG
TTCGCGGTCACGCAGCAAATCTCGGCGGTCACTCTGTTCCTGGTGGTGTT
TATGCATATGCAAGATGGCCTCATCTCGATGACGACGATGGTGATGGTAG
ATCTGCTGCTTCTCTTCGGCGGTTATGCTACTGTCTTCCTTGTGTCTCCT
AAGTGCTCTATGGTGCAATCGTCCACGCACGAGAGGGAGGGGAAGGGAAC
GCCGTCGCTTGCTCGATGTGACGGCGGGCTTGGCTTCAAGGTGATGGTAG
ATCTGCTGCTTCTCTTCGGCGGTTATGCTACTGTCTTCCTTGTGTCTCCT
AAGTGCTCTATGGTGCAATCGTCCACGCACGAGAGGGAGGGGAAGGGAAC
GCCGTCGCTTGCTCGATGTGACGGCGGGCTTGGCTTCAAGGCTGGCGACC
CCTTCGACACCGCCCGAGTGGCACGCGGAACCGTGGTTTCTTCGTTTGGG
ACTGCGGCAGGCTTGTCCGGTGATGATGGAGAGGCCCTGGAAGAGCTGTC
CCTCTTCTCTGTATCTTCGACCTTGGCATCGTTTTTATTGTTTCTCGCTA
TCCTCAGGCTGGCGACCCCTTCGACACCGCCCGAGTGGCACGCGGAACCG
TGGTTTCTTCGTTTGGGACTGCGGCAGGCTTGTCCGGTGATGATGGAGAG
GCCCTGGAAGAGCTGTCCCTCTTCTCTGTATCTTCGACCTTGGCATCGTT
TTTATTGTTTCTCGCTATCCTCAGGATCATGGCCCCTGTCTTGCGGACAC
TGACGGTTTCGTATTCAAGCGACACCATCTACGCCCTTGCCGTCACGTTC
AGCTTTTTGCACTTGGCATTTCACGACTATTCTTACGCCAACACTGCGTC
AGGACATTTTCAGGATCATGGCCCCTGTCTTGCGGACACTGACGGTTTCG
TATTCAAGCGACACCATCTACGCCCTTGCCGTCACGTTCAGCTTTTTGCA
CTTGGCATTTCACGACTATTCTTACGCCAACACTGCGTCAGGACATTTTC
AGGCTACGGAATTCAACCATTGGCGAGGGCTTCTCTGTTCTTTTCGAGTT
GGCGGAATTCCAACCGTTGAACGACCAGAAATTGCAGGACCGGGTGTGCG
AAGTGTATCGTCAGAACTTCTGCGTAAAGAGCCTAGACACCATTATCTCA
ACAAACGATATGGGTCGTTTATTGAAGCACCAGTTCTGTTGCACTTGTCG
TGTTATACTGTGTTGCGTTTTCACGTGGCGGTGGCGTGTATGGCATGCCT
GCAATTTCAGGGCACGCTGAGCTTAAATGCAGCAATATTCGCGGCGGTGC
TGTTGGCGTCTCGTCTGGAATCAAATGAGAAGGTGTTCGGGTTGGTGCTG
TTTGCCCTGGAGCTCTTCGCGTTTTTCCCGCTTGCAAGGCTACGGAATTC
AACCATTGGCGAGGGCTTCTCTGTTCTTTTCGAGTTGGCGGAATTCCAAC
CGTTGAACGACCAGAAATTGCAGGACCGGGTGTGCGAAGTGTATCGTCAG
AACTTCTGCGTAAAGAGCCTAGACACCATTATCTCAACAAACGATATGGG
TCGTTTATTGAAGCACCAGTTCTGTTGCACTTGTCGTGTTATACTGTGTT
GCGTTTTCACGTGGCGGTGGCGTGTATGGCATGCCTGCAATTTCAGGGCA
CGCTGAGCTTAAATGCAGCAATATTCGCGGCGGTGCTGTTGGCGTCTCGT
CTGGAATCAAATGAGAAGGTGTTCGGGTTGGTGCTGTTTGCCCTGGAGCT
CTTCGCGTTTTTCCCGCTTGCAAGACGAGAGGTGAAGAGGCATAGCTTGC
TGCTGCACGCTTCTGTAACGTCCGCCATGGTGCTGCCAACAGGCTTGCTG
CTATTTGTCAAGCATCCCACTCTATTTGCGGCGTACGTGGGCACCGTGGT
GCTGGTTACGTTCGCTTGTCCTCTCTGGTTGCTGAGAGTGCAGAGGTATA
AACTCCGCATAGAGGGGCCCTGGGACATTGCGCACGTCGAGGCACATCAT
ATATAGACGAGAGGTGAAGAGGCATAGCTTGCTGCTGCACGCTTCTGTAA
CGTCCGCCATGGTGCTGCCAACAGGCTTGCTGCTATTTGTCAAGCATCCC
ACTCTATTTGCGGCGTACGTGGGCACCGTGGTGCTGGTTACGTTCGCTTG
TCCTCTCTGGTTGCTGAGAGTGCAGAGGTATAAACTCCGCATAGAGGGGC
CCTGGGACATTGCGCACGTCGAGGCACATCATATATAG
back to top