mRNA_H-paniculata_contig2615.7145.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2615.7145.1
Unique NamemRNA_H-paniculata_contig2615.7145.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: D7G535_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G535_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 3.730e-113
Identity = 185/243 (76.13%), Postives = 213/243 (87.65%), Query Frame = 1 
Query:    1 MGGLYAAALQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAPFGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILRSR 729
            MGG+Y A LQA CV+IVVGGL+ASK TVN FC+AK  LVVFMT  AF+L+ ++N VPLAPFGA GVLKG+VAAFFG+LGFDEVVLL+PEAKNP+KHVPRALFASL+GVT VCA+AS+SLSGA  A +LDPDSAFAEAFR+RGMM AY +T IGEL TLPLVVLVSFMAQPRLL+AMAKDGLLP++FAEVDSRGTL  GSL SG +C++ A  VPFD+L+++ISAGVL AFNFVTSS L LRSR
Sbjct:  203 MGGVYGALLQAVCVMIVVGGLQASKYTVNTFCVAKALLVVFMTGAAFSLWDADNFVPLAPFGASGVLKGAVAAFFGFLGFDEVVLLAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDPDSAFAEAFRARGMMTAYQITTIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRVFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALRSR 445
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A835ZA89_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA89_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.100e-76
Identity = 139/249 (55.82%), Postives = 177/249 (71.08%), Query Frame = 1 
Query:   10 LYAAALQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAPFGADGVLKGS-----------VAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILR 723
            L++AALQ  CV +V+ G  ASKI VN FC+ K FL+ FM   A +L   +NL+P APFG   VL GS           ++AFFG+LGFDEV LLS E ++P ++VP +LF S+  VT V A A+++LSG +P+  LDPDS F  AF+ RG+  AY VTA+GE+VTLPLVVLVSF+AQPRLL+AMA+DGLLP++FAEVD  GTL    L SG  CV +AACVPF+ +D +ISAGVL  FN   SSLL++R
Sbjct:  218 LFSAALQLACVGVVLCGANASKIVVNFFCVLKLFLIAFMICTAVSLRNGDNLMPFAPFGLPNVLIGSXXXXXXXXXXSISAFFGFLGFDEVCLLSAETRDPHRNVPLSLFISIAVVTGVYAFAAIALSGVVPSDQLDPDSGFTVAFKQRGLTWAYEVTAVGEIVTLPLVVLVSFIAQPRLLYAMAEDGLLPKMFAEVDRNGTLFKAGLVSGLACVAVAACVPFNLVDDMISAGVLLCFNATNSSLLVMR 466
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BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A8J9S9B2_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9B2_PHATR)

HSP 1 Score: 210 bits (535), Expect = 4.870e-63
Identity = 117/239 (48.95%), Postives = 163/239 (68.20%), Query Frame = 1 
Query:   10 LYAAALQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENL-VPLAPFGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILR 723
            L AA +  G  L+++ G++ SK   NV    K  +V FMT+  F LY+  N+  PLAPFG DGVL+G+  +FFGYLG+DEV +++ EA +P++ +PRA+  ++  VT    L++L+L+G +   D+ P S F EAF +R +M A  +TA+GELVTLP+VVLVS MAQPRL F MA DGLLP +FA+VDS G L+ G+L SG V   +A  +PF  L+ +ISAG+L AF+   S LL+LR
Sbjct:  132 LPAAVVSLGSTLLLLAGVQESKNVSNVITSLKMAIVAFMTIGGFILYQKVNMQAPLAPFGVDGVLRGATTSFFGYLGYDEVCVVAGEALHPARDMPRAVLGTISIVTVFYVLSALALTGMVHYSDISPTSGFPEAFATRHVMWASQLTALGELVTLPVVVLVSLMAQPRLTFGMASDGLLPAIFAQVDSTGNLQGGTLVSGLVMTFVATFIPFVYLNDLISAGILLAFSMTNSCLLLLR 370
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: W7TKI0_9STRA (Amino acid-polyamine-organocation family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKI0_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.210e-61
Identity = 115/238 (48.32%), Postives = 162/238 (68.07%), Query Frame = 1 
Query:   10 LYAAALQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAPFGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILR 723
            +YA A+Q  C+ I++ GL  S++ ++V  L+K  LV+F+T+  F ++   NL P AP G  G+L+G +  FFGYLGFDEV  L+ EAK P+K++PRA+  ++  VT +  +A+L+L G     ++   S FAEAFR+R ++   NV A+GEL+TLPLVV VS +AQPRL FAMA+DGLLP +  +VD  G L  G+L +G   V IA  +PF AL+ VISAGVL AFNF  S+L++ R
Sbjct:  259 IYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPSGFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSR 496
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A7S2ELG1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ELG1_TRICV)

HSP 1 Score: 209 bits (532), Expect = 3.390e-60
Identity = 112/237 (47.26%), Postives = 164/237 (69.20%), Query Frame = 1 
Query:   25 LQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAP--FGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILRSR 729
            + A  V +++ G+K SK   N+F + K  LV+FM +  F L  + NLVP+ P  FG  GV +G+ ++FFGY+G+DE+  +S EAK+P++++PRA+ ASL  VT +  LA+++L+G +P +D+   S F   FR R    A  +T+IGEL+TLPLVVLV+ MAQPRL +AMA DGLLP +FA +D+ G L +G+L SG +  LIA C+PF  LD +ISAG+L AF+   SS+++LR +
Sbjct:  206 VAAASVFLLLEGVKESKAVTNIFTVVKIGLVLFMCIGGFHLMDTSNLVPVVPPEFGMSGVFRGATSSFFGYIGYDEICCISGEAKDPARNLPRAVLASLAIVTTLYMLAAIALTGMVPYEDISATSGFPNGFRYRHWDAAAQITSIGELITLPLVVLVTIMAQPRLQYAMAVDGLLPPIFARLDASGNLWHGTLISGVLMTLIATCIPFTYLDDLISAGILVAFSMTDSSVILLRHK 442
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A7S1YZA9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZA9_TRICV)

HSP 1 Score: 200 bits (509), Expect = 9.040e-60
Identity = 113/237 (47.68%), Postives = 155/237 (65.40%), Query Frame = 1 
Query:   25 LQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAP--FGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILRSR 729
            + A  V +++ G+K SK   N F + K  LV FMTV AF L K  NL PL P  +G  GVL+G+ ++FFGY+G+DEV  L+ EA +P ++VPRA+  ++ GVT + A A+L+L+G +P  D+D +S F   FR R   +   + A GE+ T+P+VVL+S MAQPRLL+A A+DG+LP  FA  DS G LR G+L SG    ++A  VPF  LD +IS+G+L AF  VT S LIL  R
Sbjct:   20 VSAASVALLLDGVKESKAITNFFTVTKICLVTFMTVTAFALMKPSNLTPLVPPDYGVSGVLRGATSSFFGYVGYDEVCCLAGEAIDPKRNVPRAVLLTIAGVTVLYATAALALTGMVPYGDIDANSGFPSGFRRRDASVTAQIVAAGEVFTMPVVVLISLMAQPRLLYAAAEDGVLPAAFARADSTGNLRFGTLVSGVSMTIVATFVPFGFLDDLISSGILVAFC-VTDSALILTRR 255
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A7S4IL23_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IL23_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.380e-59
Identity = 115/230 (50.00%), Postives = 160/230 (69.57%), Query Frame = 1 
Query:   40 VLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAP--FGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILR 723
            +L+ + G+K SK   N F L K  LV+FMT+ +F L   ENL PL P  FGA G+  G+   FFGY+G+DE+  ++ EA NPS+++PRA+ ASL  VT +  LA+++L+G +P +D+   S F + FR RG++ A  ++AIGEL TLPLVVLVS MAQPRL +AMA DGL+P +FA++D+ G L  G+L SG V +LIA  VPF  L+ +ISAG+L AF    SS+++LR
Sbjct:  230 ILLHLKGVKESKAVTNFFSLLKLCLVLFMTIGSFVLMNPENLSPLVPPEFGARGIFTGASTLFFGYIGYDEICCMAGEAINPSRNLPRAVLASLATVTVLYILAAVALTGMVPYQDISETSPFPDGFRYRGIIWASQLSAIGELFTLPLVVLVSIMAQPRLQYAMATDGLIPPIFAKMDANGNLWWGTLISGIVMILIATFVPFTFLNDLISAGILIAFTITDSSVILLR 459
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A7S2IG81_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG81_9STRA)

HSP 1 Score: 207 bits (528), Expect = 7.760e-59
Identity = 108/232 (46.55%), Postives = 164/232 (70.69%), Query Frame = 1 
Query:   40 VLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAP--FGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILRSR 729
            VL+++ G+K SK   N+F   K  LV F+ +  F L++ EN+ P  P  FG  G+ +G+ ++FFGY+G+DE+  L+ EA+NPS ++PR++ ASLV VT +   A+L+L+G +P + +   S+F +AFR RG  +   ++A+GE++TLPLVVLV+ MAQPRL +AM+ DGLLP +FA VDS G L +G+L SG + V+IA CVPF  LD +ISAG+L AF+   +S++++R +
Sbjct:  280 VLLLLNGVKESKFVTNLFTTIKIALVSFLCIAGFLLFQKENIQPFIPAKFGLSGIFRGATSSFFGYIGYDEICCLAGEAQNPSVNLPRSILASLVIVTVLYVAAALALTGMVPWEYISETSSFPDAFRYRGWELCAQISALGEIITLPLVVLVTIMAQPRLQYAMSIDGLLPPIFAHVDSTGNLWHGTLISGTIMVVIATCVPFTYLDDLISAGILVAFSMTDASVILIRHQ 511
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A7S4J7E7_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J7E7_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.210e-58
Identity = 114/235 (48.51%), Postives = 163/235 (69.36%), Query Frame = 1 
Query:   25 LQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAP--FGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILR 723
            + A  V +++ G+K SK   N+F + K  LV+FM   +  L    NL PL P  FGA G+ +G+ ++FFGY+GFDE+  +S EAKNPSK++PRA+ ASL+ VT++   A+++L+G +P +D+   SAF + FR RG  +A  ++A GEL TLPLVVLV+ MAQPRL +AM+ DGLLP +FA++D  G L  G+L SG + VLIA  VPF  LD +ISAG+L AF+   +S+++LR
Sbjct:  208 VSAASVTLLLKGVKESKKVTNIFTVIKMCLVLFMAFGSLYLLNPSNLSPLVPPQFGASGIFRGATSSFFGYIGFDEICCMSGEAKNPSKNLPRAVIASLLIVTSLYMFAAVALTGMVPYEDISSTSAFPDGFRYRGWEVAAEISAWGELFTLPLVVLVTIMAQPRLQYAMSIDGLLPPIFAQIDETGNLWFGTLISGILMVLIATFVPFVYLDDLISAGILVAFSMTDTSVVLLR 442
[Close]
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Match: A0A7S1CXR0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXR0_CYCTE)

HSP 1 Score: 196 bits (499), Expect = 3.720e-57
Identity = 108/226 (47.79%), Postives = 151/226 (66.81%), Query Frame = 1 
Query:   46 IVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLYKSENLVPLAPFGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRALFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVTAIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSLASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILR 723
            I+V G++ SK+T N F + K FLV+FMTV  F  + ++NL P  P G   VL+G+ + FF YLG+D V +LS EA +P + VPRA+ ++L  VT +  LA ++L+G  P   L+  SAF+EAF +        +TA GE++TLP+VVL+S +AQPRLL AMA DGLLP+    VD+ G LR G+L SG    +IA+CVPF  L+ +ISAG+L AF+   S L++LR
Sbjct:   42 ILVKGVRESKMTANFFAILKVFLVIFMTVGGFLFFSTKNLSPFCPHGPSSVLQGATSCFFAYLGYDGVCVLSGEALHPQRDVPRAVLSTLAIVTVLYILAVIALTGMQPYTQLNDTSAFSEAFLAHNANWFAQITAAGEIITLPVVVLISMLAQPRLLQAMALDGLLPEFLGRVDNNGNLRMGALISGVGMTIIASCVPFRYLNDLISAGILVAFSMTNSCLVLLR 267
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2615.7145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G535_ECTSI3.730e-11376.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZA89_9STRA1.100e-7655.82Amino acid permease-domain-containing protein n=1 ... [more]
A0A8J9S9B2_PHATR4.870e-6348.95Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
W7TKI0_9STRA4.210e-6148.32Amino acid-polyamine-organocation family n=1 Tax=N... [more]
A0A7S2ELG1_TRICV3.390e-6047.26Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1YZA9_TRICV9.040e-6047.68Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4IL23_9STRA5.380e-5950.00Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2IG81_9STRA7.760e-5946.55Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4J7E7_9STRA1.210e-5848.51Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A7S1CXR0_CYCTE3.720e-5747.79Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2615contigH-paniculata_contig2615:13233..18926 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue1.8e-93
Seed eggNOG ortholog2880.D7G535
KEGG koko:K03294,ko:K13864
KEGG TC2.A.3.2,2.A.3.3.2
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0016020,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0042170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
EggNOG free text desc.amino acid transport
EggNOG OGsCOG0531@1,KOG1286@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons5
Model size732
Cds size732
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2615.7145.1prot_H-paniculata_contig2615.7145.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2615 13233..18926 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929781.554869-CDS-H-paniculata_contig2615:13232..133371622929781.554869-CDS-H-paniculata_contig2615:13232..13337Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 13233..13337 +
1691481008.024267-CDS-H-paniculata_contig2615:13232..133371691481008.024267-CDS-H-paniculata_contig2615:13232..13337Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 13233..13337 +
1622929781.5688362-CDS-H-paniculata_contig2615:15785..159261622929781.5688362-CDS-H-paniculata_contig2615:15785..15926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 15786..15926 +
1691481008.0371234-CDS-H-paniculata_contig2615:15785..159261691481008.0371234-CDS-H-paniculata_contig2615:15785..15926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 15786..15926 +
1622929781.5884066-CDS-H-paniculata_contig2615:17677..178751622929781.5884066-CDS-H-paniculata_contig2615:17677..17875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 17678..17875 +
1691481008.046734-CDS-H-paniculata_contig2615:17677..178751691481008.046734-CDS-H-paniculata_contig2615:17677..17875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 17678..17875 +
1622929781.6029255-CDS-H-paniculata_contig2615:18233..183531622929781.6029255-CDS-H-paniculata_contig2615:18233..18353Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 18234..18353 +
1691481008.0587804-CDS-H-paniculata_contig2615:18233..183531691481008.0587804-CDS-H-paniculata_contig2615:18233..18353Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 18234..18353 +
1622929781.6172462-CDS-H-paniculata_contig2615:18758..189261622929781.6172462-CDS-H-paniculata_contig2615:18758..18926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 18759..18926 +
1691481008.0727308-CDS-H-paniculata_contig2615:18758..189261691481008.0727308-CDS-H-paniculata_contig2615:18758..18926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2615 18759..18926 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2615.7145.1

>prot_H-paniculata_contig2615.7145.1 ID=prot_H-paniculata_contig2615.7145.1|Name=mRNA_H-paniculata_contig2615.7145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
MGGLYAAALQAGCVLIVVGGLKASKITVNVFCLAKGFLVVFMTVMAFTLY
KSENLVPLAPFGADGVLKGSVAAFFGYLGFDEVVLLSPEAKNPSKHVPRA
LFASLVGVTAVCALASLSLSGALPAKDLDPDSAFAEAFRSRGMMIAYNVT
AIGELVTLPLVVLVSFMAQPRLLFAMAKDGLLPQLFAEVDSRGTLRNGSL
ASGAVCVLIAACVPFDALDSVISAGVLFAFNFVTSSLLILRSR*
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mRNA from alignment at H-paniculata_contig2615:13233..18926+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2615.7145.1 ID=mRNA_H-paniculata_contig2615.7145.1|Name=mRNA_H-paniculata_contig2615.7145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5694bp|location=Sequence derived from alignment at H-paniculata_contig2615:13233..18926+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGGGCTGTACGCGGCGGCTCTGCAGGCGGGCTGCGTGTTGATCGT
GGTGGGGGGGCTCAAGGCCAGCAAGATCACCGTCAACGTGTTCTGTCTGG
CCAAGGTATATTCAAGGACGAGGGATTGACACCCCGTTTGGGCCATGATC
TAGCCAGGCAATGCCTGATAAATTGGAATTCAGAGTTGCTGCGTGTTCGT
GTTGCAAGTGTTGGTGTCTATCACGTGCTACGGTAAAAAGTGCTATCGAG
CTCATCTATGATAGTCGCCGCTTATTGCTGTTTTTCCCGGTGCCCGCAGT
TTTTTCGATACATGAAGTGTGTATCGAGAGCCGGTCAGGTCCACAATTTG
ACGGCCTTGACAAATGAAGAACGCTCGAGCAAGGCTCCAAACTTGAAAAT
ATCAACGGTATGTAACAATGACAGGTAGACCACAACGGGTACATCGCGAT
GTGTGGAACATTGGAACATGACACGCGGTGAGGCGAAAAGTAGAATTGCT
GCAGTTATTACCTTACCAACAATACAAGGAAAACACCTTTGCTGCAAATG
CAAAATTAAAGAATGATGTCGATACTGTAGAAAGATTTACGGCGTTTTAT
GCGAAAAACAACATTATCCATGATTTTTAATATGTTGGAAAATTGGAATG
TCTGCACTGCACGCTCGCTAGGAGTGAATTCCCAATCCTGCATACGCGAT
CCACGTACAGCACCCTTGCAGCCGCCTGTCTGTTCATAGAGCAGTTGAGA
TCATGTTGTGCAACAATATCGCATTTGGTCTGAAGTTGGTTTAGAACGAT
AAAGGTATTGGTGTACCCGCCAAATAGAGCCGGTTTTCAATTGACGCGCT
GCATAGACAGTTTTTTCGACAATTTGAAAAGCTGACCTGTACAGTACAGT
CCGTTGGCAACCACGCTTATAATGCCTCTCACTTGCGACACATCACAGTG
AGTAACGAACGTACAGTAGCAACCGCGTTGAGAGAAGATCCGTTTGATGT
GACTTGTCATCATCGTCCCTTCTAGACGGTCATGCTTACTGGCACTGCAA
TGCGCTGCGTCAGCACCACAGGTAGACTGAAGCGGGAGCACGGTGCGGCG
GTAGTGTTGGTGACTTTGCGCCACGGAAGAAATGGTGCTGAACAGTAAAA
AAATGGTCAAAACTGTAGACATCGATTTCGACTGCTTCTCCTGGGAATCG
CAACTGTGCACAGTCACGTCGTCTTTGCTATATATATTTTTAACCCCCAG
AAGGCTGAGTCAAAAACATTTACCGATATGGCCAAATGAAAGACTGACCG
GCAGCAAAAAGAAACAAGCTTACATGCAACGCTGCATCAAGCCCTCAAAA
AGAGTCAAAAGACGTTATGTTTGACGTTGTCATGCAAGTTCAAAGAGGAA
CATGTTTAATTAATATTAATAACCCCCTAATAATTCGGCATCACAAGTCC
AGGAACTGTTGTGTATAGAGATTGAGCACGAATTGGGAGAGTTCGAAGAT
GGATATTAATCATACCTCGTTACAAGAAATGCACCCCGTCTCCCGCTAGG
TGAGCACAAGCACTATAACGTATTTACTGTATACTATATGTAATGTATTT
GCCCAATGAAACAAACGTCAATGGCCAGATGGTAACGTAGTGACTAATAA
TATCCGATTTACGCTATTAATAGTAAAGCTTGACTTAAGTCAGTTGTTGT
TATTGTTATTGTTGTTGTTGGGTTCAGAAGAAAAACTCCGCCAGGGCGAA
GGATCAGTCATGAAGACGATTGCACCTATACTGTGCTCTTTATCCATATT
ACATATCTGACTGGACCAGACTATGCTATTAATGGGTTCAAATAGAGTCA
CAAAACCCTGACCCCTATAGTGACATGTTAAAGACGTAGTCGACTATGTG
GCGTGGAGAAGAAATCGACCCGTCGACCACTAGAGTAGTGCAGCTCGGAC
AGGCAGATAATTTGATCCCCTCTCAGCGCGACTTCTTCGGAGCCCAAAGG
CTCTCTCAACCATGGATATGTGAGTATAATCATACTGTGAAGATCTCTCA
GCCATGAATAAGTGGTGTTGAAAGGGTTGGTGGTTGGAGCTAAATTGGGT
AAAACTATTTTAGATTAGGAATTGGGACTTTTTTGTTGCGATGATTTAAT
TAAAACAGAAAGAAGGAACTTGCAATTGTAATAGTAGTAGTAGTAGTAGG
GTATTTTTCGAAAATTGTAGTGGCTTTTATTTGATTCCATATTGCTCTTG
CCGTGTTCTTTAATCTGCTCTTTAAGAGCCGAAAATACCCGTACGTATAC
GCACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGATAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAG
GTAGGTAGGTTAGATAGAAAGATAGATAGATAGATGGATACACATGATAC
GTCAATACCTAGATACATACATGCATGCATAGATACATACATACATACAT
ATATACTGGTGTCACCAATGCGTGCTCTCCTATATGATTTGGTCTTTGTC
CAGGGCTTTTTGGTGGTGTTCATGACCGTAATGGCGTTTACGCTCTACAA
GAGCGAAAACTTGGTCCCGCTCGCACCCTTTGGAGCGGATGGAGTTTTGA
AGGGATCTGTAGCAGCGTTTTTCGGTTACCTGGGGTTCGATGAGGTGAGC
TGCGTGGTCGCTAATTATCATTATTATTATATTTTTAGGTCAACACGCTC
GCCCCATCATGCAGACGCGCAGCCGGAGGATAAAAGTCCTCCGTGGCAAC
ACTAGTACCTTTATAGATGAAAACACATCGCACACACACACACACACACA
CACACACACACACACACACATTTCCTCTGATAGCAGGCACATTCCGCAGT
TAGCGGCTGCAGCGTGCCTCCTACAGCTAAAAGAAAATAGCAAGAGATCT
CGGGGACGGTCCCGGGACCCGAGCACCGAACTACGGCATCAGCTGGAAAA
TACAAGAAAATAATATAGACATAGGTATGACTCCCAAAATAATTAAAACA
AAATCTAACAGGAATATTGGTGATATCTGACTGCGGGTCTGAGAGATTGG
ACTAATAAAAAATGTACATGAATTGAGAAACGGCGTAAAAAAACGTCGTA
AACGTTAACCTCGGACTGGCTTGTGCATCATTGTGAGTTAGCACAGCAGT
GTTATTTTCGGTCTTGTTAGAGTCATTATCCACATCTTTGATACTTCACG
CGCGTGTTACCTGTTCTGGTTTCACTTGTGTTGTAAGGCGCATACCAGCA
GTTTGTGGCGGGTCTTGTGGGTTCCTCCTTGAGGCAATTTTTCACGTTCT
GATCACACGGTGGACTCCTTACCGTGGAGAATTCTTGACAAGTGTGCGGT
ATCGTGTGGTCACTGCTTCAATATATTCATCGATATATTTTGTATGTCCA
TGCCGCCTTTGCACGCTTGCGCACATGGTGTTACTGGCTCCGTTTTTATT
GCTTAGTGGTTGCGGTACTCTTAGAACCGCGGCTACGTACGTCCATTCTT
GGTATTTTTGCCGTGCCCAACGGCTCTACTATCTAACATGATCTGAGCCC
AAACGGCTCGCTTTAGAAAATTCCTTGTCTAGAAGTGACCGGAGTACATG
GTTGAAAATCTGTTCTATTGACGAGCACATAGGCACATTACAAGACAGGA
CTTGACGTCGATTTTCTAGCTCACGTACAAGAATTACGCTGAGGGGTATT
TACTGTTTGCATTGCAGTGCACAGCATGTGGCACATACGGGAGAGTCGAG
TACTGTACGTGTTTCGGTGCAAGCCCATGCAGGTCCACGCGTGGTATTCA
GGCGTTGTCGTGTCCCTGTGATACTATTTTGATACGGTACCATTAAAGCT
GTTACTACGGCTCGACGGGTTTTGGTTGTTGAGGGGGAGTGGTGAACGAC
AAGTCTTGATTTCGGTTCAAGTTACTCCTTGGTCATTGAATTCTTTTCAG
AGTACGATAGAGACCGTTTGTACAATTTTATGTGAGAGCAATATCCCTCA
TGCAAAACCATATAAGTGAGATGATAGCGAATTTTTCGAAACCACATGAA
AAATTTGAATTCATAAATGATTAAAAAAAAAAACTAAGTAAAATCACCTG
AGTATACTCGATTTGTATTGGACAGCTAAAACGTACGTGGCACAAAAGAC
TTGAAATTCTGCTAGTGCTGCTACGACTGTTATAGTAATACTGTCTAATA
GAACATGACATTGATCCCGGCCAGATAGATGATGACAATAGTTAGAGGGT
AAATGGCAATTCTGATTGATTAGATGTTAGCTGGATAGTGTGCATGTTAT
TCGTTTAAACACCCCAAGTATCCCACACCAAGAGTAATGAAACAAAAAAA
AACATGCCGTTGCTACTAACTCACACATACACGACGTCTGCCCAGGTAGT
GCTGCTGTCTCCCGAAGCAAAGAACCCCTCCAAACACGTTCCCCGAGCGC
TGTTCGCTTCGCTCGTGGGGGTGACGGCCGTGTGTGCACTGGCTTCTTTG
TCATTATCCGGAGCGCTGCCGGCAAAGGATTTAGACCCTGATTCTGCTTT
TGCGGAGGCGTTTCGAAGCAGAGGAATGATGATCGCCTACAATGTACGTA
AGGTCTTGAGGTGATTATTTCATTGGACGTACGTAATTTGGTAGTTGGTC
TCAACAAGAACCCGGACTCAAACAGAGAGGGACGTCACTGATTTTTTCTT
GTATTTTTTTTCATTTTGTAATTTTTTTCATATATATATATATAATGCGT
TAAGTAGCACGTTGTTTCCCGCTAATTCAGTCGAATTTAATTTTGAAGTC
TTTTTTTTATTATCTTCGTCTATAAAAATGTAGCTGTGCACGTACAAGGA
TGACAGGTGTGCGATTTTATTCTGTCGTCGAGTGCGCTTTTGCCCTGTCT
TGCCTTGCCTTGCCTTGTCTTACGTTGTCTTGCCGTGTTGGCTCTTGTCA
GGTAACGGCCATAGGGGAGCTGGTTACGCTTCCTCTGGTGGTTCTTGTGT
CCTTCATGGCGCAACCGCGGCTACTGTTTGCCATGGCGAAGGATGGGCTC
TTGCCTCAGCTCTTCGCGGAGGTGCTGTTAAAAACACATACATATTTGTT
TCACCTATGTATAGTAAAACCAGTAGATATTGATGCCACTGGGATGCGAA
CGTTTTAAAACCGCGATCGATGATCTCGAGAAATGATTGTAAGGCGTCAC
AGTCCAAATGAAATGTTGGCCCCCTGTTTATCCGTTTTTCTCGTATGTTA
ATCCCGAACAATCCTGCATGATCCGGAGCACATTGAGTAAACATGCTCGC
TCATGCTGAGCCTCCGGACAAATGCTTTATGTTGTTTCTCGTCGTAAGAT
GGTTATGCTCCAACTGTTTGGATTCGGCTGGTGGGTGAATCATCTGACGG
CGAACATGAGCACATTCAGCCCTTAATGTAACAAATTTTCCGTGTTTTGT
TGGGGGGTGGGGGGGGGGTATTACAGGTTGATTCTCGAGGTACTCTCAGG
AACGGGTCGCTCGCTAGCGGCGCCGTGTGCGTATTGATCGCGGCCTGCGT
TCCGTTCGATGCGTTGGACAGTGTCATTAGCGCAGGCGTCCTGTTCGCCT
TCAACTTCGTGACCAGTAGCCTGCTTATTCTGCGCTCTAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig2615:13233..18926+

>mRNA_H-paniculata_contig2615.7145.1 ID=mRNA_H-paniculata_contig2615.7145.1|Name=mRNA_H-paniculata_contig2615.7145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig2615:13233..18926+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGGGCTGTACGCGGCGGCTCTGCAGGCGGGCTGCGTGTTGATCGT
GGTGGGGGGGCTCAAGGCCAGCAAGATCACCGTCAACGTGTTCTGTCTGG
CCAAGATGGGGGGGCTGTACGCGGCGGCTCTGCAGGCGGGCTGCGTGTTG
ATCGTGGTGGGGGGGCTCAAGGCCAGCAAGATCACCGTCAACGTGTTCTG
TCTGGCCAAGGGCTTTTTGGTGGTGTTCATGACCGTAATGGCGTTTACGC
TCTACAAGAGCGAAAACTTGGTCCCGCTCGCACCCTTTGGAGCGGATGGA
GTTTTGAAGGGATCTGTAGCAGCGTTTTTCGGTTACCTGGGGTTCGATGA
GGGCTTTTTGGTGGTGTTCATGACCGTAATGGCGTTTACGCTCTACAAGA
GCGAAAACTTGGTCCCGCTCGCACCCTTTGGAGCGGATGGAGTTTTGAAG
GGATCTGTAGCAGCGTTTTTCGGTTACCTGGGGTTCGATGAGGTAGTGCT
GCTGTCTCCCGAAGCAAAGAACCCCTCCAAACACGTTCCCCGAGCGCTGT
TCGCTTCGCTCGTGGGGGTGACGGCCGTGTGTGCACTGGCTTCTTTGTCA
TTATCCGGAGCGCTGCCGGCAAAGGATTTAGACCCTGATTCTGCTTTTGC
GGAGGCGTTTCGAAGCAGAGGAATGATGATCGCCTACAATGTAGTGCTGC
TGTCTCCCGAAGCAAAGAACCCCTCCAAACACGTTCCCCGAGCGCTGTTC
GCTTCGCTCGTGGGGGTGACGGCCGTGTGTGCACTGGCTTCTTTGTCATT
ATCCGGAGCGCTGCCGGCAAAGGATTTAGACCCTGATTCTGCTTTTGCGG
AGGCGTTTCGAAGCAGAGGAATGATGATCGCCTACAATGTAACGGCCATA
GGGGAGCTGGTTACGCTTCCTCTGGTGGTTCTTGTGTCCTTCATGGCGCA
ACCGCGGCTACTGTTTGCCATGGCGAAGGATGGGCTCTTGCCTCAGCTCT
TCGCGGAGGTAACGGCCATAGGGGAGCTGGTTACGCTTCCTCTGGTGGTT
CTTGTGTCCTTCATGGCGCAACCGCGGCTACTGTTTGCCATGGCGAAGGA
TGGGCTCTTGCCTCAGCTCTTCGCGGAGGTTGATTCTCGAGGTACTCTCA
GGAACGGGTCGCTCGCTAGCGGCGCCGTGTGCGTATTGATCGCGGCCTGC
GTTCCGTTCGATGCGTTGGACAGTGTCATTAGCGCAGGCGTCCTGTTCGC
CTTCAACTTCGTGACCAGTAGCCTGCTTATTCTGCGCTCTAGGTGAGTTG
ATTCTCGAGGTACTCTCAGGAACGGGTCGCTCGCTAGCGGCGCCGTGTGC
GTATTGATCGCGGCCTGCGTTCCGTTCGATGCGTTGGACAGTGTCATTAG
CGCAGGCGTCCTGTTCGCCTTCAACTTCGTGACCAGTAGCCTGCTTATTC
TGCGCTCTAGGTGA
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