mRNA_H-paniculata_contig2612.7137.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Match: D8LNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW9_ECTSI) HSP 1 Score: 603 bits (1556), Expect = 1.410e-208 Identity = 350/562 (62.28%), Postives = 405/562 (72.06%), Query Frame = 1
Query: 1 RPALDETRLFEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYATKKMSASAAYAKALYTIRDRVDGLELGTTEVRCERERKKRGPKQWPP-----PPAQLHSASEIATSV--RPPSALDSLFTMDEHTAMRTLDMVDEAKVTVIEKKLNAMVQSLDDRFSAMVGQGTACLRLMHAAEANSKNAYTRYTEVVTQSLKREDTSAAERAMLVSREVVSSDVWLADMNYRVAVTQQGRVWKGASAKLGDLFSSMKDIEVERRKAIQGGLAILMQLQDSLLRDLPVLKDPVLQSLDRINVDRHLLDQEVKHEMRKGAARHRAQRQDSGGGVAXXXXXXXXXXXXXXATVTGG-------GAGSVASSAVAGQAVPPLPADFLKDVKSPLESKLIARCTMLERKEKMMMTSRWVLVLGILTHDSYLLLFDVPKGCAAYKRQFNARTGEAFAELVPKPEVDSMAVEIGKHKEGKLLDVTGLPVPPTVAIDLSACQVSFKPDGKNDATFDITEIKPAQGMKGMFKNYEETKYTLRGRSQEAMVDWLCQIKEMGRVGLQAVTES 1644
R ALDETR+FEQRR HFGEKYDGD RDRVD LE GTTE E+ER+K K+WPP PP Q + + +P SALD LF M+E+TAMRT+DM EA VTVI+K+LNAMV+ LDDRF+ MVGQGTACLRLMH+AE NS AY RY EVVT SL RE + A A L R+V SDVWLADMNYRVAVTQQ RVWKG SAKLGDLF MKDIEVERRKAIQGGL ++QLQD+L RDLP LK+PV+ +LDRINVDRHLLDQEV+ +MR GAAR A RQ++G G XXXXXXXXXXXX G GSV S +PADFL ++SPL S LIAR TMLER+EK M+ SRW+LVL ILTHDSYLLLFDVP+G AA+K+Q NART EAFAELVPKPEV +MAVE+GKHK+GK +D GLPVPP+VAIDLSACQVSFKPDGK+DATF+ITEIKP +G+K +FK++EETK+TLRGRSQEAMVDW+C+IKEMGR G++AV++S
Sbjct: 133 RKALDETRIFEQRRHSHFGEKYDGD------------------------------------------RDRVDSLEPGTTEALREKERRKNNHKEWPPQQLPLPPQQRRGSGTDGGGLPPQPASALDCLFEMEEYTAMRTIDMCQEAHVTVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEMNSAKAYGRYQEVVTASLGREASPARATAPLTLRDVAGSDVWLADMNYRVAVTQQARVWKGVSAKLGDLFGRMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGAGXXXXXXXXXXXXXXPAGXXXXXXXXXXXXGGGSVERSET-------MPADFLAGLESPLASSLIARSTMLERREKAMIASRWILVLAILTHDSYLLLFDVPRGTAAHKKQLNARTSEAFAELVPKPEVGAMAVELGKHKDGKGVDSGGLPVPPSVAIDLSACQVSFKPDGKSDATFEITEIKPTRGVKTVFKDFEETKFTLRGRSQEAMVDWVCEIKEMGRAGMKAVSDS 645
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Match: A0A6H5KEN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN9_9PHAE) HSP 1 Score: 432 bits (1110), Expect = 5.220e-143 Identity = 259/398 (65.08%), Postives = 295/398 (74.12%), Query Frame = 1
Query: 1 RPALDETRLFEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYATKKMSASAAYAKALYTIRDRVDGLELGTTEVRCERERKKRGPKQWPP-----PPAQLHSASEIATSV--RPPSALDSLFTMDEHTAMRTLDMVDEAKVTVIEKKLNAMVQSLDDRFSAMVGQGTACLRLMHAAEANSKNAYTRYTEVVTQSLKREDTSAAERAMLVSREVVSSDVWLADMNYRVAVTQQGRVWKGASAKLGDLFSSMKDIEVERRKAIQGGLAILMQLQDSLLRDLPVLKDPVLQSLDRINVDRHLLDQEVKHEMRKGAARHRAQRQDSGGGVAXXXXXXXXXXXXXXATVTG---------GGAGSVASSAVAGQAVPPLPADFLKDVKSPLESKLI 1146
R ALDETR FEQRR HFGEKYDGDSLYWKCFVELIRRSQANNRRAI+YAT+K+SA+ AYAK+LY IRDRVD LE GTTE E+ER+K K+WPP PP Q + A + +P SALD LF M+E TAMRT+DM EA VTVI+ +LNAMV+ LD+RF+ MVGQGTACLRLMH+AE NS AY RY E+VT SL+RE + A A L R+V SD+WLADMNYRVAVTQQ RVWKG SAKLGDLF MKDIEVERRKAIQGGL ++QLQD+L RDLP LKDPVL +LDRINVDRHLLDQEV+ +MR GAAR A RQ++G XXXXXXXXXXXXXX GG GSV S + +PP DFL ++SPL S LI
Sbjct: 133 RKALDETRTFEQRRHSHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLSATHAYAKSLYAIRDRVDSLEPGTTEALREKERRKNNHKKWPPQQLPLPPQQRRGSGTDAGGLPPQPASALDCLFEMEEWTAMRTIDMCQEAHVTVIDNQLNAMVKKLDERFAEMVGQGTACLRLMHSAEMNSVKAYGRYQEIVTASLEREASPARATAPLTLRDVAGSDIWLADMNYRVAVTQQARVWKGVSAKLGDLFGKMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKDPVLHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGASAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGSVERS----ETIPP---DFLAGLESPLASSLI 523
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Match: A0A836CKX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX7_9STRA) HSP 1 Score: 211 bits (538), Expect = 6.420e-57 Identity = 150/374 (40.11%), Postives = 196/374 (52.41%), Query Frame = 1
Query: 28 FEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYATKKMSASAAYAKALYTIRDRVDGLELGTTEVRCERER---KK-----------------------------------------------RGPKQWPPPPAQLHSASEIATSVRPPSALDSLFTMDEHTAMRTLDMVDEAKVTVIEKKLNAMVQSLDDRFSAMVGQGTACLRLMHAAEANSKNAYTRYTEVVTQSLKREDTSAAERAMLVSREVVS----SDVWLADMNYRVAVTQQGRVWKGASAKLGDLFSSMKDIEVERRKAIQGGLAILMQLQDSLLRDLPVLKDPVLQSLDRINVDRHLLDQEVKHEMRK-GAARHR-AQRQDSGGGVA 981
FE++RS +F + + LYW+ FVE+IRR+Q +N + I+Y T K++A+ AYA+ LY IRD V G ++GTT ERER KK R Q PP SE+ +S RPPSAL+ +F M+E +AM L DE + V+ K L AM L +RF+ MV G ACL+++ EA++ A T + SL RE + A E + SDVW+ DM YRVAVTQQ ASA+LG LF MKD+EV RR AI+ L L+Q QD + R LP+LKDPVLQ L+RIN DR LD EV+ MR AA+ R A + GGG A
Sbjct: 4 FEEQRSSYFSTLFQNNQLYWQSFVEIIRRNQTSNDKTISYLTAKLAAARAYAQLLYGIRDSVTGNKMGTTAALRERERAGAKKEAAARGRGASVLSVLRVIMDGHNDSCMRLTACADAAMSSAAMRQASARASSQLPP-----RGTSEMGSSGRPPSALEHMFDMEEKSAMMMLTFCDEMESDVLGKMLQAMATDLGERFTRMVATGDACLKVLSDNEASTVKATT-----LVGSL-REPAPGSVAAAAAQEEGAAAAPRSDVWITDMAYRVAVTQQLAACDAASAQLGALFGHMKDLEVNRRTAIRNALLSLLQAQDLVWRQLPILKDPVLQVLERINTDRRFLDGEVRDAMRTLSAAKLRTASKAGEGGGEA 366
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Match: W7T3J3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3J3_9STRA) HSP 1 Score: 122 bits (307), Expect = 7.380e-26 Identity = 141/566 (24.91%), Postives = 241/566 (42.58%), Query Frame = 1
Query: 28 FEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYATKKMSASAAYAKALYTIRDRVDGLEL-GTTEVRCERERKKRGPKQWPPPPAQLHSAS-------------------EIATSVRPPS----------ALDSLFTMDEHTAMRTLDMVDEAKVTVIEKKLNAMVQSLDDRFSAMVGQGTACLRLMHAAEANSKNAYTRYTEV---VTQSLKREDTSAAERAMLVSREVVSSDVWLADMNYRVAVTQQGRVWKGASAKLGDLFSSMKDIEVERRKAIQGGLAILMQLQDSLLRDLPVLKDPVLQSLDRIN-VDRHLLDQEVKHEMRK--GAARHRAQRQDSGGGVAXXXXXXXXXXXXXXATVTGGGAGSVASSAVAGQAVPPLPADFLKDVKSPLESKLIARCTMLERK-----EKMMMTSRWVLVLGILTHDSYLLLFDVPKGCAAYKRQFNARTGEAFAELVPKPEVDSMAVEIGKHKEGKLLDVTGLPVPPTVAIDLSACQVSFKPDGKNDATFDITEIKPAQGMKGMFKNYEETKYTLRGRSQEAMVDWLCQI 1602
FE++R F + ++ +W+ F + +S N R + + TK++ Y + L + ++L GT R G K+ PPP + + AS ATS A+D++ + + D V + + +++ KL +V S ++ +G L ++AAE++ A+ Y + +T K T++ + ++ + D+WL DM YRVAV Q +W+ L DLF MK +EV RR + + MQ Q S LP ++ ++ D H +++E+ E++ AA + Q SG G + A +G AVP F+ ++ +PL+S L+ R +LE + E + + RW L +LT D++L +FD+P A + R EAF LVP+P G+ ++GK DV V P+ + L ++P+ +A FD+TE + G +FK E T+ L+ R+QE M W+ +
Sbjct: 25 FERQRLLLFTPQIRVNATHWEAFKSTLAKSSVENERVLAFFTKRIDMEEKYCEHLAEL----PYMDLTGTGGWRT-------GTKKCPPPGSGVAKASISSKPSKSSVGAGAVTSKTACATSTTTKDCNKSSEGTLPAMDTMMASTDTLVTKYSDYVRDTRRELVDGKLRNLVNSFKRTSDEVLEEGCLALENVNAAESHIVAAFAEYMKGAGNLTSYSKNSTTTSPHQ-----QQQGTPDLWLLDMQYRVAVELQKTIWQETQHHLHDLFRRMKTLEVNRRSQLNALVLRFMQNQGSFWAQLPQAAAECSLAISTLSCTDPHQVEEELSEEIKTCAKAAEQKEQHHSSG---------KENGAKGRDKDQRGVNVKAADDDAASGAAVPE---PFVGNLMAPLDSPLVRRAEVLEHRRVTGVESLPLMKRWRPCLAVLTLDNFLHIFDMPSEVTA-GTVLSPR--EAFKLLVPRP-----INRRGRFRKGK--DVER--VIPSHFLALPYSSARYRPEEGAEA-FDVTEARENTGFVSVFKAREVTRVVLKARTQEKMEAWVAIV 549
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Match: A0A835YTK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK9_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.200e-25 Identity = 137/565 (24.25%), Postives = 229/565 (40.53%), Query Frame = 1
Query: 1 RPALDETRLFEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYATKKMSASAAYAKALYTIRDRVDGLELGTTEVRC--------------ERERKKRGPKQWPPPPAQLHSASEIATSVRPPSA----------LDSLFTMDEHTAMRTLDMVDEAKVTVIEKKLNAMVQSLDDRFSAMVGQ----GTACLRLMHAAEANSKNAYTRYTEVVTQSLKRE-DTSAAERAMLVSREVVSSDVWLADMNYRVAVTQQGRVWKGASAKLGDLFSSMKDIEVERRKAIQGGLAILMQLQDSLLRDLPVLKDPVLQSLDRINVDRHLLDQEVKHEMRKG---AARHRAQRQDSGGGVAXXXXXXXXXXXXXXATVTGGGAGSVASSAVAGQAVPPLPADFLKDVKSPLESKLIARCTMLERKEKMMMTSRWVLVLGILTHDSYLLLFDVPKGCAAYKRQFNARTGEAFAELVPKPEVDSMAVEIGKHKEGKLLDVTGLPVPPTVAIDLSACQVSFKP---DGKNDATFDITEIKPAQGMKGMFKNYEETKYTLRGRSQEAMVDW 1590
R +D+ R FE RR F ++ + YW+ ++ R A +++ ++SA AYA +L + D + G++ GT+ E ER+K+ P P A A P A LD L MD +A A +E A +Q D SA + + G CL M A E AY L + + + + + + D+WLADMNYR+AV QQ + W G ++ + ++D+E++RR + + + ++ Q LP + V + L R++VD L++ ++ E+++ A + +D T G G +PA F+ D P++S L+ + +L+RK+K M+S+WV L +LT D+YL +FD+ G+ PK ++++ + +L L V P+ ++DLSA V + K+ + EIK G K FK + K +LR S+ M W
Sbjct: 386 RDEIDKVRAFEARRRSFFQAQHMCNGAYWQALKDVARDGGAAVNGVLSWYRLRLSAQRAYAASLLDMNDSIAGIKKGTSARAVAASTQRPGGSALIGEHEREKKAPANQAPLRAASVKALRAPGRSGPLGAAGAADGNGELLDELCAMDCVSAAEA-----HALANALEDSACAQLQRRQDDISAEMRRACEDGDQCLSSMLAVEDYVLKAYEALHRAAADGLAQPVEYMDHPGSTSIKTQSAAPDMWLADMNYRMAVQQQRQSWGGMTSVMACTLGRLRDLELDRRHSTKVVIEDTLRKQAEASGRLPTAANSVFKCLTRLDVDAATLEKTIRKELKRQPSVTAEPQVLNEDD--------------------TAHMGPDG--------------IPA-FVDDFAGPMDSPLMIKAAVLQRKDKKNMSSKWVPALVVLTKDTYLHVFDL---------------GDTPVGKDPKAAMNALLPPVDMGTVARL--DKSLAVTPSQSLDLSAYIVGRRAKQTQPKHARQLHVIEIKQNTGFKKAFKKESQRKASLRAHSESEMGHW 893
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Match: D7FN77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN77_ECTSI) HSP 1 Score: 110 bits (275), Expect = 8.120e-22 Identity = 107/458 (23.36%), Postives = 191/458 (41.70%), Query Frame = 1
Query: 1 RPALDETRLFEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYATKKMSASAAYAKALYTIRDRVDGLELGTTEVRCER----ERKKRGPKQWPPPPAQLHSASEIATSVRPPSALDSLFTMDEHT--AMRTLD-MVDEAKVTVIEKKLNAMVQSLDDRFSAMVGQGTACLRLMHAAEANSKNAYTRYTEVVTQSLKREDTSAAERAMLVSREVVSSDVWLADMNYRVAVTQQGRVWKGASAKLGDLFSSMKDIEVERRKAIQGGLAILMQLQDSLLRDLPVLKDPVLQSLDRINVDRHLLDQEVKHEMRKGAARHRAQRQDSGGGVAXXXXXXXXXXXXXXATVTGGGAGSVASSAVAGQAVPPLPAD--FLKDVKSPLESKLIARCTMLERKEKMMMTSRWVLVLGILTHDSYLLLFDVPKGCAAYKRQFNARTGEAFAELVPKPEVDSM 1347
R L + FE +RS +F ++Y S+YW +++ + ++ ++Y K+ A A++ D+V G + G T++R ++ E+K + +L A SA+ +++ M E A R D + DE + + K+ M + + RF + +GTACL + + A+ E + V + + DVW +Y+ AV Q W +AKLG++F+ MKD+E ERR ++ + + + L P + ++ R +DQEV H + A R ++ DS + ++ P PAD F++ + +PLES L+ M+ER+E + S++ L +L+ D +L FD+P K +A AF E+ P +D +
Sbjct: 11 RADLAKVEEFESKRSGYFADEYRKSSMYWSSLCDVMSANDGPTQQVLSYVAGKLEADRINTAAIFVNADKVFGEKKGATKLRHDKIRHEEQKAKTKGVTASIDVELLVAGGPGKEAPTNSAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQ--------------VGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANHAIGDNWKKMCTLSGPANDAAKAVDASRGAVDQEV-HSL--AAVRMEEKKHDSS-------------------------KEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKK---DASASAAFQEISPSISLDDL 423
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Match: A0A6H5L7U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U6_9PHAE) HSP 1 Score: 105 bits (262), Expect = 2.650e-20 Identity = 101/460 (21.96%), Postives = 189/460 (41.09%), Query Frame = 1
Query: 1 RPALDETRLFEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYATKKMSASAAYAKALYTIRDRVDGLELGTTEVRCERERKKRGPKQWPPPPAQLH-------SASEIATSVRPPSALDSLFTMDEHTAMRTLDMVDEAKVTVIEKKLNAMVQSLDDRFSAMVGQGTACLRLMHAAEANSKNAYTRYTEVVTQSLKREDTSAAERAMLVSREVVSSDVWLADMNYRVAVTQQGRVWKGASAKLGDLFSSMKDIEVERRKAIQGGLAILMQLQDSLLRDLPVLKDPVLQSLDRINVDRHLLDQEVKH--EMRKGAARHRAQRQDSGGGVAXXXXXXXXXXXXXXATVTGGGAGSVASSAVAGQAVPPLPAD--FLKDVKSPLESKLIARCTMLERKEKMMMTSRWVLVLGILTHDSYLLLFDVPKGCAAYKRQFNARTGEAFAELVPKPEVDSM 1347
R L E FE +RS +F ++Y S+YW +++ + ++ ++Y K+ A A++ D++ + G T++R ++ R + + A + + A + A+ + MD A + DE + + K+ M + + RF + +GTACL + + A+ E + V + + DVW +Y+ AV Q W +AKLG++F+ MK++E ERR ++ + + + L L P + ++ +R +DQEV +R +H ++ V ++ P PAD F++ + +PLES L+ + M+ER+E + S++ L +L+ D +L FD+P + KR +A AF E+ P +D +
Sbjct: 11 RADLAEIEEFESKRSGYFADEYRKSSMYWSSLCDVMSLNDGPTQQVLSYVAGKLEADRVNTAAIFANADKLFDEKKGATKLRHDKIRHEEQKAKTKGVTASIDVELLVAGGPEKEAPTNNAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQ--------------VGGKTLHEDVWFLFCSYQTAVVHQKEAWDAVTAKLGEVFAKMKNLEGERRTTLREFMLSANRAIGDNWKTLCTLPGPASDAATAVDANRGAVDQEVHSLAAVRMEEKKHETSKEH------------------------------VLANTTHIVRADPAPADDSFIETLSAPLESPLVRKMMMIERREGKAIGSKYYAGLMVLSWDGFLHFFDIPSS-STVKR--DASASAAFQEISPSISLDDL 423 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2612.7137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2612.7137.1 >prot_H-paniculata_contig2612.7137.1 ID=prot_H-paniculata_contig2612.7137.1|Name=mRNA_H-paniculata_contig2612.7137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=552bp RPALDETRLFEQRRSHHFGEKYDGDSLYWKCFVELIRRSQANNRRAINYAback to top mRNA from alignment at H-paniculata_contig2612:839..15061+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2612.7137.1 ID=mRNA_H-paniculata_contig2612.7137.1|Name=mRNA_H-paniculata_contig2612.7137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14223bp|location=Sequence derived from alignment at H-paniculata_contig2612:839..15061+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2612:839..15061+ >mRNA_H-paniculata_contig2612.7137.1 ID=mRNA_H-paniculata_contig2612.7137.1|Name=mRNA_H-paniculata_contig2612.7137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3312bp|location=Sequence derived from alignment at H-paniculata_contig2612:839..15061+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |