prot_H-paniculata_contig2608.7122.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2608.7122.1
Unique Nameprot_H-paniculata_contig2608.7122.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length261
Homology
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: D7FM85_ECTSI (KH_dom_type_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM85_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.620e-19
Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = 0
Query:  162 SGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTI 219
            SGD+++Q QV +PD++VGVILGK GATVI++QN +GARIQVSQRGEY+PGT NRAV +
Sbjct:    3 SGDMVSQMQVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNRAVWV 60          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.380e-16
Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 0
Query:  129 TGMPSMFP--FTPEIPIMATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNR 215
            TGM SM+P  +  E+ I+     QG   E      SGD+++Q QV +PD++VGVILGK GATVI++QN +GARIQVSQRGEY+PGT NR
Sbjct: 1022 TGMTSMYPSPYGGEVAIV-----QGHAPE--VVMDSGDMVSQMQVAIPDHLVGVILGKRGATVIDMQNQTGARIQVSQRGEYIPGTTNR 1103          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A2G8L9G0_STIJA (Nova n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L9G0_STIJA)

HSP 1 Score: 78.6 bits (192), Expect = 3.330e-14
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 0
Query:  108 SVSPMQHQRGYGDLPYPHGALTGMPSMFPFTPEIPIMATGSHQG-QLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISG 221
            + +P+    G G +P  H AL      +PFT            G  LS    + V+ + + +  V+VP+ +VG ILGKSG T++E QN+SGA+IQ+S++GE+VPGT NR VTI G
Sbjct:   42 AATPVTIPMGTGHVPSGHEALM---QGYPFTSTFTAAPIQQFPGVALSTESPSHVAKENVVE--VEVPESLVGAILGKSGKTLVEFQNYSGAKIQISKKGEFVPGTRNRKVTIKG 151          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: UPI0014552079 (RNA-binding protein Nova-1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014552079)

HSP 1 Score: 82.0 bits (201), Expect = 4.330e-14
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query:  124 PHGALTGMPSMFPFTPEIPIMATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQRQA 248
            P G+LTGM +         + A    Q  +  H   D+S D + +  + VP+ +VG ILGK G T++E Q  SGA+IQ+S++GEYVPGT NR VTI+G   A + AQ+    +  + AQ EQ +A
Sbjct:  428 PMGSLTGMGAG--------LGAFSLQQDSIPTHSIKDISRDTILE--IDVPENLVGAILGKRGQTLVEFQTTSGAKIQISKKGEYVPGTRNRKVTITG---APNQAQLAHFFVTQKVAQEEQNRA 539          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A835ZEM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.220e-13
Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 0
Query:  123 YPHGAL-TGMPSMFPFTPEIPIMATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQ-MMLHNLCTQAAQ 242
            YP G +  GMP + P  P++P+         + +H   DVS  V     V +PD ++GVILG+ G TV ELQ  +GARI VS+RG  +PGT +R VTI+G+  A H AQ MM+H +    AQ
Sbjct:  598 YPGGGMMVGMPVLAPVVPQMPM--------PMVQH--PDVSA-VATTIMVSIPDALIGVILGRGGVTVNELQMITGARISVSRRGNALPGTTDRVVTITGSAAAAHAAQYMMMHRVQEACAQ 708          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: UPI000A2A8354 (RNA-binding protein Nova-1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8354)

HSP 1 Score: 79.7 bits (195), Expect = 1.610e-13
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0
Query:  167 AQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQRQAQGMMYPQQP 257
            A  ++ VPD ++G ILGK G T+ EL  +SGARIQVSQ+GE+VPGT+NR V I+G  QA      + H L TQ  Q  Q +A+ ++ PQ P
Sbjct:  278 ATLEITVPDELIGAILGKGGKTINELMQYSGARIQVSQKGEFVPGTNNRKVVITGDVQAA----QLAHFLITQRLQ--QVEAERLVNPQPP 362          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A670XVA5_PSETE (KH domain-containing protein n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670XVA5_PSETE)

HSP 1 Score: 75.1 bits (183), Expect = 3.730e-13
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0
Query:  160 DVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQ 245
            D S DV+   ++ VP+ +VG ILGK G T++E Q  +GARIQ+S++GE+VPGT NR VTI+GT  A   AQ ++    TQ   +EQ
Sbjct:   56 DGSKDVV---EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLI----TQRITYEQ 134          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A3Q4HM21_NEOBR (Uncharacterized protein n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4HM21_NEOBR)

HSP 1 Score: 75.9 bits (185), Expect = 5.150e-13
Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 0
Query:  171 VQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQA 240
            + VP+ +VG ILGK G T++E Q  +GARIQ+S++GE++PGT NR VTI+G+Q A   AQ ++  L T A
Sbjct:   97 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQLQTSA 166          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A8C6YYB6_NOTPE (KH domain-containing protein n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6YYB6_NOTPE)

HSP 1 Score: 75.1 bits (183), Expect = 9.520e-13
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0
Query:  160 DVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQ 245
            D S DV+   ++ VP+ +VG ILGK G T++E Q  +GARIQ+S++GE+VPGT NR VTI+GT  A   AQ ++    TQ   +EQ
Sbjct:   82 DGSKDVV---EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLI----TQRITYEQ 160          
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: UPI000695E587 (RNA-binding protein Nova-2 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI000695E587)

HSP 1 Score: 72.4 bits (176), Expect = 1.300e-12
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 0
Query:  145 ATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCT 238
            A G+  G L+    A  S   L +  + VP+ +VG ILGK G T++E Q  +GARIQ+S++GE++PGT NR VTI+G+  A   AQ ++    T
Sbjct:    6 AAGAAGGFLTAEKLAAESAKELVE--IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVT 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM85_ECTSI2.620e-1970.69KH_dom_type_1 domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KV61_9PHAE2.380e-1656.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2G8L9G0_STIJA3.330e-1440.87Nova n=1 Tax=Stichopus japonicus TaxID=307972 RepI... [more]
UPI00145520794.330e-1440.80RNA-binding protein Nova-1-like n=1 Tax=Asterias r... [more]
A0A835ZEM4_9STRA1.220e-1343.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI000A2A83541.610e-1349.45RNA-binding protein Nova-1 n=1 Tax=Exaiptasia diap... [more]
A0A670XVA5_PSETE3.730e-1348.84KH domain-containing protein n=1 Tax=Pseudonaja te... [more]
A0A3Q4HM21_NEOBR5.150e-1351.43Uncharacterized protein n=1 Tax=Neolamprologus bri... [more]
A0A8C6YYB6_NOTPE9.520e-1348.84KH domain-containing protein n=1 Tax=Nothoprocta p... [more]
UPI000695E5871.300e-1242.55RNA-binding protein Nova-2 n=1 Tax=Chinchilla lani... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 165..238
e-value: 3.6E-8
score: 43.1
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 167..242
e-value: 3.3E-20
score: 73.6
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 169..239
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 169..234
e-value: 1.3E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 146..239
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 166..233
score: 17.129
IPR033086RNA-binding protein Nova-1PANTHERPTHR10288:SF229RNA-BINDING PROTEIN NOVA-1coord: 146..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2608contigH-paniculata_contig2608:7096..14058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2608.7122.1mRNA_H-paniculata_contig2608.7122.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2608 6962..14066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2608.7122.1 ID=prot_H-paniculata_contig2608.7122.1|Name=mRNA_H-paniculata_contig2608.7122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MSGLGGSGLGGMVGGPGVPGWPVAHGHTNTWGGVPEVETGPSNSNSRHGQ
AKGSGANCGAAAGGGSGSGAGGGGANAMGMAAQQQQLQHQQGMMAPGSMV
YPGYHPYSVSPMQHQRGYGDLPYPHGALTGMPSMFPFTPEIPIMATGSHQ
GQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARI
QVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQRQAQG
MMYPQQPPFY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR033086NOVA1